pycom13g13410

Dihydrolipoyl dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0010455
Physical Location & Seq
Forward (+)
9429624 .. 9433794
4171 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1707 bp
ATGCAGGCCTCCCTCTCTCTCCCTGCCCTCTCGCCAGCCGTCCCCAGGCCAAGCTACGTCGTTCAATCCGCCCTCCCTCTCCCGCCATCCAAGCCTATCAATCTCCGATTCTGCGGCCTCCGCCGCGAGGCCTTGGGATTCTCGCCTCTCGGCCGCTCCGACTCGCACCGCGTCCGCCTCTCTGCTCCTTCCCGCTCTGCCACAATCTCGGCCTCCTCGTCCTCCGGCAATGGCAGCCCTCCCAAGTCGTTCGACTATGACTTGCTCATCATCGGTGCCGGCGTCGGTGGCCACGGTGCCGCTCTCCACGCCGTCGAAAAGGGTTTGAAAACTGCCATAGTGGAGGGAGATGTGGTGGGTGGAACCTGTGTTAACAGGGGATGTGTTCCGTCTAAAGCTCTTCTGGCAGTTAGTGGTCGGATGCGTGAGCTTCAGAACGAACATCACCTCAAGGCTTTAGGTTTGCAGGTGTCAGCTGCTGGATATGACAGACAGGGAGTAGCTGATCATGCGAATAATCTTGCAACAAAAATTCGTAATAGTTTGACCAATTCAATGAATTCTCTTGGAGTCGACATTTTGACAGGTGTTGGTACAATTCTGGGCCCTCAAAAGGTGCAAATTGGATCATCTGACAAAGTAGTAACGGCAAAAGATATAATCATTGCCACTGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAGTCGATGGGAAGACTGTGATTACAAGTGACCATGCACTCAAATTGGAGTTTGTTCCAGAGTGGATTGCAATTGTTGGAAGTGGTTACATAGGTCTCGAGTTCAGCGATGTTTATACTGCACTTGGGAGTGAGGTTACTTTCATTGAAGCTTTAGATCAGCTTATGCCTGGTTTTGATCCTGAGATTGGGAAGTTAGCCCAGAGGGTTCTAATAAATCCACGAAAGATTGATTATCAAACTGGAGTATTTGCATCCAAGATCACACCTGCAAAGGATGGGAAACCAGTCACCATTGAACTAATTGATGCAAAGACCAAGGAACCAAAAGATACTCTTGAGGTGGATGCAGCACTAATAGCAACTGGAAGAGCCCCATTCACACAAGGTCTTGGATTGGAGAATATTGATGTAGCAACACAACGTGGCTTTATTCCTGTTGATGAGCGCATGCGAGTAATAGATGCAAATGGAAAATTGGTTCCTCACCTATTTTGCATTGGTGATGCTAATGGCAAGATGATGCTTGCTCATGCAGCCAGTGCACAAGGAATTTCAGTGGTTGAACAAGTCACAGGAAGAGACCACGTGCTCAATCATTTGAGCATTCCCGCAGCATGTTTCACACATCCAGAAATCAGTATGGTTGGACTGACAGAGCCTCAAGCAAGAGAGAAAGCTGAAAAGGAGGGATTTGAAGTAAGTATTGCCAAGACCAGTTTCAAGGCTAACACAAAGGCCTTGGCAGAAAATGAAGGAGAGGGACTCGCTAAGTTGATATATAGACCAGATAACGGAGAGATTCTTGGAGTTCATATTTTTGGGTTACATGCCGCAGACCTTATTCACGAGGCATCAAATGCGATAGCATTGGGGACACGCATTCAAGATATCAAGTTTGCAGTCCATGCACATCCTACTTTGTCCGAAGTCCTAGACGAACTATTCAAGTCCGCAAAGGTAGCTCATGTTCCCAGCCCAGTAAGTGAACCAGTTGCAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004148 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006082 GO:0006084 GO:0006085 GO:0006086 GO:0006090 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032787 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0046685 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0070013 GO:0071616 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00260 ko00280 ko00620 ko00630 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00260 map00280 map00620 map00630 map00640 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
Pyr_redox_2 Pyr_redox_dim

Protein Analysis

569

Amino Acids

59.94

Weight (kDa)

6.42

Isoelectric Point (pI)

30.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 86 - 418 1.1e-59 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 257 - 332 9.1e-15 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 437 - 548 1.9e-30 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G16950 AT3G16950 AT4G16155
fragaria_vesca FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440
malus_domestica MD16G1157500.v1.1
prunus_persica Prupe.1G122400_v2.0.a1
pyrus_communis pycom13g13410
rosa_chinensis RchiOBHm_Chr4g0424491
rosa_laevigata RLG00000007470
rosa_multiflora Rmu_sc0002603.1_g000006
rosa_roxburghii Rroxscaffold_5G00366420
rosa_rugosa Rorug04G0198000
rosa_samantha Rh4AG254300 Rh4BG259700 Rh4CG270800 Rh4DG254000
rosa_wichuraiana Rw4G021960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 457, 979
Acc36I ACCTGC 2 cut(s) 457, 979
AccB1I GGYRCC 2 cut(s) 275, 296
AccBSI CCGCTC 3 cut(s) 156, 195, 302
AccI GTMKAC 1 cut(s) 573
AccII CGCG 2 cut(s) 126, 171
AclWI GGATC 2 cut(s) 634, 875
AcoI YGGCCR 2 cut(s) 151, 289
AcsI RAATTY 3 cut(s) 531, 559, 1254
AcuI CTGAAG 1 cut(s) 416
AcvI CACGTG 1 cut(s) 1291
AcyI GRCGYC 1 cut(s) 282
AdeI CACNNNGTG 1 cut(s) 1127
AfaI GTAC 1 cut(s) 595
AfiI CCNNNNNNNGG 5 cut(s) 45, 127, 613, 890, 1496
AjnI CCWGG 2 cut(s) 44, 871
AjuI GAANNNNNNNTTGG 2 cut(s) 1406, 1438
AloI GAACNNNNNNTCC 2 cut(s) 1167, 1199
AluBI AGCT 9 cut(s) 54, 398, 430, 476, 503, 854, 865, 1382, 1667
AluI AGCT 9 cut(s) 54, 398, 430, 476, 503, 854, 865, 1382, 1667
Alw21I GWGCWC 2 cut(s) 1249, 1296
Alw26I GTCTC 2 cut(s) 803, 1278
Alw44I GTGCAC 1 cut(s) 1245
AlwI GGATC 2 cut(s) 634, 875
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 1 cut(s) 800
AoxI GGCC 9 cut(s) 6, 47, 115, 129, 151, 210, 289, 604, 1440
ApaI GGGCCC 1 cut(s) 608
ApaLI GTGCAC 1 cut(s) 1245
ApeKI GCWGC 5 cut(s) 234, 476, 1052, 1238, 1316
ApoI RAATTY 3 cut(s) 531, 559, 1254
AspLEI GCGC 1 cut(s) 1152
AspS9I GGNCC 2 cut(s) 604, 605
AsuHPI GGTGA 4 cut(s) 437, 985, 1181, 1217
AvaI CYCGRG 1 cut(s) 800
AxyI CCTNAGG 1 cut(s) 693
BaeGI GKGCMC 2 cut(s) 608, 1249
BalI TGGCCA 1 cut(s) 291
BanI GGYRCC 2 cut(s) 275, 296
BanII GRGCYC 2 cut(s) 608, 1078
BauI CACGAG 1 cut(s) 1550
BbrPI CACGTG 1 cut(s) 1291
BbsI GAAGAC 1 cut(s) 722
Bbv12I GWGCWC 2 cut(s) 1249, 1296
BbvI GCAGC 5 cut(s) 246, 463, 1064, 1250, 1328
BccI CCATC 3 cut(s) 94, 704, 974
BceAI ACGGC 3 cut(s) 23, 296, 663
BcgI CGANNNNNNTGC 2 cut(s) 688, 722
BciT130I CCWGG 2 cut(s) 46, 873
BclI TGATCA 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 803, 1278
BfaI CTAG 1 cut(s) 1637
BfuAI ACCTGC 2 cut(s) 457, 979
Bme1390I CCNGG 2 cut(s) 46, 873
BmeT110I CYCGRG 1 cut(s) 800
BmgT120I GGNCC 2 cut(s) 604, 605
BmiI GGNNCC 6 cut(s) 277, 298, 364, 606, 1026, 1185
BmrFI CCNGG 2 cut(s) 46, 873
BmrI ACTGGG 1 cut(s) 1676
BmsI GCATC 8 cut(s) 411, 965, 1000, 1039, 1156, 1198, 1215, 1565
BmuI ACTGGG 1 cut(s) 1676
BpiI GAAGAC 1 cut(s) 722
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
BpmI CTGGAG 1 cut(s) 966
BpuEI CTTGAG 3 cut(s) 434, 1061, 1350
BsaAI YACGTR 1 cut(s) 1291
BsaHI GRCGYC 1 cut(s) 282
BsaI GGTCTC 2 cut(s) 803, 1278
BsaJI CCNNGG 5 cut(s) 44, 132, 292, 1020, 1443
BsaXI ACNNNNNCTCC 2 cut(s) 339, 369
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 127, 613, 890, 1496
Bse118I RCCGGY 1 cut(s) 278
Bse1I ACTGG 8 cut(s) 676, 949, 989, 1072, 1242, 1419, 1682, 1694
Bse21I CCTNAGG 1 cut(s) 693
Bse3DI GCAATG 2 cut(s) 235, 663
BseBI CCWGG 2 cut(s) 46, 873
BseDI CCNNGG 5 cut(s) 44, 132, 292, 1020, 1443
BseGI GGATG 8 cut(s) 86, 386, 426, 956, 985, 1054, 1330, 1615
BseLI CCNNNNNNNGG 5 cut(s) 45, 127, 613, 890, 1496
BseMI GCAATG 2 cut(s) 235, 663
BseMII CTCAG 1 cut(s) 876
BseNI ACTGG 8 cut(s) 676, 949, 989, 1072, 1242, 1419, 1682, 1694
BseRI GAGGAG 1 cut(s) 205
BseSI GKGCMC 2 cut(s) 608, 1249
BseX3I CGGCCG 1 cut(s) 151
BseXI GCAGC 5 cut(s) 246, 463, 1064, 1250, 1328
BseYI CCCAGC 1 cut(s) 1676
BsgI GTGCAG 1 cut(s) 807
Bsh1236I CGCG 2 cut(s) 126, 171
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 9 cut(s) 8, 49, 117, 131, 153, 212, 291, 606, 1442
BshNI GGYRCC 2 cut(s) 275, 296
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 2 cut(s) 1249, 1296
BsiHKCI CYCGRG 1 cut(s) 800
BsiSI CCGG 2 cut(s) 225, 279
BslFI GGGAC 3 cut(s) 26, 1479, 1591
BslI CCNNNNNNNGG 5 cut(s) 45, 127, 613, 890, 1496
BsmAI GTCTC 2 cut(s) 803, 1278
BsmFI GGGAC 3 cut(s) 26, 1479, 1591
BsmI GAATGC 2 cut(s) 1308, 1584
BsnI GGCC 9 cut(s) 8, 49, 117, 131, 153, 212, 291, 606, 1442
Bso31I GGTCTC 2 cut(s) 803, 1278
BsoBI CYCGRG 1 cut(s) 800
Bsp120I GGGCCC 1 cut(s) 604
Bsp1286I GDGCHC 4 cut(s) 608, 1078, 1249, 1296
Bsp143I GATC 5 cut(s) 505, 626, 859, 880, 963
BspANI GGCC 9 cut(s) 8, 49, 117, 131, 153, 212, 291, 606, 1442
BspCNI CTCAG 1 cut(s) 877
BspFNI CGCG 2 cut(s) 126, 171
BspLI GGNNCC 6 cut(s) 277, 298, 364, 606, 1026, 1185
BspMI ACCTGC 2 cut(s) 457, 979
BspPI GGATC 2 cut(s) 634, 875
BspQI GCTCTTC 2 cut(s) 405, 1066
BspT107I GGYRCC 2 cut(s) 275, 296
BspTNI GGTCTC 2 cut(s) 803, 1278
BsrBI CCGCTC 3 cut(s) 156, 195, 302
BsrDI GCAATG 2 cut(s) 235, 663
BsrFI RCCGGY 1 cut(s) 278
BsrI ACTGG 8 cut(s) 676, 949, 989, 1072, 1242, 1419, 1682, 1694
BssAI RCCGGY 1 cut(s) 278
BssECI CCNNGG 5 cut(s) 44, 132, 292, 1020, 1443
BssMI GATC 5 cut(s) 505, 626, 859, 880, 963
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 1 cut(s) 1550
BssT1I CCWWGG 3 cut(s) 132, 1020, 1443
Bst2BI CACGAG 1 cut(s) 1550
Bst2UI CCWGG 2 cut(s) 46, 873
Bst4CI ACNGT 2 cut(s) 296, 721
Bst6I CTCTTC 3 cut(s) 405, 1066, 1276
BstACI GRCGYC 1 cut(s) 282
BstAPI GCANNNNNTGC 3 cut(s) 1244, 1562, 1610
BstBAI YACGTR 1 cut(s) 1291
BstC8I GCNNGC 5 cut(s) 6, 36, 280, 1154, 1230
BstDEI CTNAG 3 cut(s) 693, 885, 1473
BstDSI CCRYGG 1 cut(s) 292
BstF5I GGATG 8 cut(s) 86, 386, 426, 956, 985, 1054, 1330, 1615
BstFNI CGCG 2 cut(s) 126, 171
BstHHI GCGC 1 cut(s) 1152
BstKTI GATC 5 cut(s) 508, 629, 862, 883, 966
BstMAI GTCTC 2 cut(s) 803, 1278
BstMBI GATC 5 cut(s) 505, 626, 859, 880, 963
BstMCI CGRYCG 1 cut(s) 154
BstNI CCWGG 2 cut(s) 46, 873
BstNSI RCATGY 3 cut(s) 1156, 1323, 1535
BstSCI CCNGG 2 cut(s) 44, 871
BstSLI GKGCMC 2 cut(s) 608, 1249
BstUI CGCG 2 cut(s) 126, 171
BstV1I GCAGC 5 cut(s) 246, 463, 1064, 1250, 1328
BstV2I GAAGAC 1 cut(s) 722
BstZI CGGCCG 1 cut(s) 151
Bsu36I CCTNAGG 1 cut(s) 693
BsuRI GGCC 9 cut(s) 8, 49, 117, 131, 153, 212, 291, 606, 1442
BtgI CCRYGG 1 cut(s) 292
BtgZI GCGATG 1 cut(s) 825
BtsCI GGATG 8 cut(s) 86, 386, 426, 956, 985, 1054, 1330, 1615
BtsIMutI CAGTG 3 cut(s) 669, 1249, 1266
BveI ACCTGC 2 cut(s) 457, 979
Cac8I GCNNGC 5 cut(s) 6, 36, 280, 1154, 1230
CaiI CAGNNNCTG 1 cut(s) 479
CfoI GCGC 1 cut(s) 1152
Cfr10I RCCGGY 1 cut(s) 278
Cfr13I GGNCC 2 cut(s) 604, 605
CseI GACGC 2 cut(s) 160, 271
Csp6I GTAC 1 cut(s) 594
CviAII CATG 8 cut(s) 509, 737, 1153, 1235, 1320, 1532, 1610, 1670
CviQI GTAC 1 cut(s) 594
DdeI CTNAG 3 cut(s) 693, 885, 1473
DpnI GATC 5 cut(s) 507, 628, 861, 882, 965
DpnII GATC 5 cut(s) 505, 626, 859, 880, 963
DraIII CACNNNGTG 1 cut(s) 1127
EaeI YGGCCR 2 cut(s) 151, 289
EagI CGGCCG 1 cut(s) 151
Eam1104I CTCTTC 3 cut(s) 405, 1066, 1276
EarI CTCTTC 3 cut(s) 405, 1066, 1276
EciI GGCGGA 3 cut(s) 58, 110, 164
EclXI CGGCCG 1 cut(s) 151
Eco130I CCWWGG 3 cut(s) 132, 1020, 1443
Eco147I AGGCCT 3 cut(s) 8, 131, 1442
Eco24I GRGCYC 2 cut(s) 608, 1078
Eco31I GGTCTC 2 cut(s) 803, 1278
Eco32I GATATC 1 cut(s) 1594
Eco52I CGGCCG 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 416
Eco72I CACGTG 1 cut(s) 1291
Eco81I CCTNAGG 1 cut(s) 693
Eco88I CYCGRG 1 cut(s) 800
EcoO109I RGGNCCY 1 cut(s) 605
EcoRI GAATTC 1 cut(s) 559
EcoRII CCWGG 2 cut(s) 44, 871
EcoRV GATATC 1 cut(s) 1594
EcoT14I CCWWGG 3 cut(s) 132, 1020, 1443
EcoT38I GRGCYC 2 cut(s) 608, 1078
ErhI CCWWGG 3 cut(s) 132, 1020, 1443
FaeI CATG 8 cut(s) 512, 740, 1156, 1238, 1323, 1535, 1613, 1673
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FaqI GGGAC 3 cut(s) 26, 1479, 1591
FatI CATG 8 cut(s) 508, 736, 1152, 1234, 1319, 1531, 1609, 1669
FauI CCCGC 3 cut(s) 90, 200, 1321
FbaI TGATCA 1 cut(s) 505
FblI GTMKAC 1 cut(s) 573
FokI GGATG 8 cut(s) 73, 393, 433, 943, 992, 1061, 1317, 1602
FriOI GRGCYC 2 cut(s) 608, 1078
FspBI CTAG 1 cut(s) 1637
GlaI GCGC 1 cut(s) 1151
GsaI CCCAGC 1 cut(s) 1680
GsuI CTGGAG 1 cut(s) 966
HaeIII GGCC 9 cut(s) 8, 49, 117, 131, 153, 212, 291, 606, 1442
HapII CCGG 2 cut(s) 225, 279
HgaI GACGC 2 cut(s) 160, 271
HhaI GCGC 1 cut(s) 1152
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 8 cut(s) 512, 740, 1156, 1238, 1323, 1535, 1613, 1673
Hin6I GCGC 1 cut(s) 1150
HinP1I GCGC 1 cut(s) 1150
HincII GTYRAC 2 cut(s) 373, 574
HindII GTYRAC 2 cut(s) 373, 574
HindIII AAGCTT 1 cut(s) 852
HinfI GANTC 6 cut(s) 108, 138, 161, 570, 1467, 1504
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 2 cut(s) 225, 279
HphI GGTGA 4 cut(s) 437, 985, 1181, 1217
Hpy166II GTNNAC 4 cut(s) 373, 574, 1247, 1691
Hpy188I TCNGA 6 cut(s) 107, 160, 420, 435, 634, 1630
Hpy188III TCNNGA 7 cut(s) 761, 800, 884, 1040, 1334, 1550, 1589
Hpy8I GTNNAC 4 cut(s) 373, 574, 1247, 1691
Hpy99I CGWCG 3 cut(s) 62, 287, 317
HpyAV CCTTC 2 cut(s) 198, 1451
HpyCH4III ACNGT 2 cut(s) 296, 721
HpyCH4IV ACGT 3 cut(s) 57, 1126, 1290
HpyF3I CTNAG 3 cut(s) 693, 885, 1473
HpySE526I ACGT 3 cut(s) 57, 1126, 1290
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 8 cut(s) 512, 740, 1156, 1238, 1323, 1535, 1613, 1673
HspAI GCGC 1 cut(s) 1150
KroI GCCGGC 1 cut(s) 278
KroNI GCCGGC 1 cut(s) 280
Ksp22I TGATCA 1 cut(s) 505
KspAI GTTAAC 1 cut(s) 373
Kzo9I GATC 5 cut(s) 505, 626, 859, 880, 963
LguI GCTCTTC 2 cut(s) 405, 1066
LmnI GCTCC 2 cut(s) 161, 190
Lsp1109I GCAGC 5 cut(s) 246, 463, 1064, 1250, 1328
LweI GCATC 8 cut(s) 411, 965, 1000, 1039, 1156, 1198, 1215, 1565
MaeI CTAG 1 cut(s) 1637
MaeII ACGT 3 cut(s) 57, 1126, 1290
MaeIII GTNAC 7 cut(s) 643, 731, 788, 838, 991, 1273, 1527
MalI GATC 5 cut(s) 507, 628, 861, 882, 965
MbiI CCGCTC 3 cut(s) 156, 195, 302
MboI GATC 5 cut(s) 505, 626, 859, 880, 963
MboII GAAGA 4 cut(s) 392, 727, 1083, 1293
MfeI CAATTG 1 cut(s) 774
MhlI GDGCHC 4 cut(s) 608, 1078, 1249, 1296
MlsI TGGCCA 1 cut(s) 291
MluNI TGGCCA 1 cut(s) 291
MlyI GAGTC 3 cut(s) 155, 579, 1461
MmeI TCCRAC 4 cut(s) 183, 398, 760, 1330
Mox20I TGGCCA 1 cut(s) 291
MroNI GCCGGC 1 cut(s) 278
MscI TGGCCA 1 cut(s) 291
MseI TTAA 1 cut(s) 372
Msp20I TGGCCA 1 cut(s) 291
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 2 cut(s) 225, 279
MspR9I CCNGG 2 cut(s) 46, 873
MunI CAATTG 1 cut(s) 774
Mva1269I GAATGC 2 cut(s) 1308, 1584
MvaI CCWGG 2 cut(s) 46, 873
MvnI CGCG 2 cut(s) 126, 171
NaeI GCCGGC 1 cut(s) 280
NdeII GATC 5 cut(s) 505, 626, 859, 880, 963
NgoMIV GCCGGC 1 cut(s) 278
NlaIII CATG 8 cut(s) 512, 740, 1156, 1238, 1323, 1535, 1613, 1673
NlaIV GGNNCC 6 cut(s) 277, 298, 364, 606, 1026, 1185
NmeAIII GCCGAG 2 cut(s) 129, 188
NmuCI GTSAC 3 cut(s) 731, 991, 1273
NspI RCATGY 3 cut(s) 1156, 1323, 1535
PaeI GCATGC 1 cut(s) 1156
PaeR7I CTCGAG 1 cut(s) 800
PaqCI CACCTGC 2 cut(s) 457, 979
PceI AGGCCT 3 cut(s) 8, 131, 1442
PciSI GCTCTTC 2 cut(s) 405, 1066
PcsI WCGNNNNNNNCGW 4 cut(s) 156, 215, 279, 807
PctI GAATGC 2 cut(s) 1308, 1584
PdiI GCCGGC 1 cut(s) 280
PfeI GAWTC 3 cut(s) 108, 138, 1504
PleI GAGTC 3 cut(s) 155, 578, 1461
PmaCI CACGTG 1 cut(s) 1291
PmlI CACGTG 1 cut(s) 1291
PpsI GAGTC 3 cut(s) 155, 578, 1461
Ppu21I YACGTR 1 cut(s) 1291
Psp6I CCWGG 2 cut(s) 44, 871
PspCI CACGTG 1 cut(s) 1291
PspFI CCCAGC 1 cut(s) 1676
PspGI CCWGG 2 cut(s) 44, 871
PspN4I GGNNCC 6 cut(s) 277, 298, 364, 606, 1026, 1185
PspOMI GGGCCC 1 cut(s) 604
PspPI GGNCC 2 cut(s) 604, 605
PsrI GAACNNNNNNTAC 2 cut(s) 1656, 1688
PstNI CAGNNNCTG 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 1 cut(s) 595
RsaNI GTAC 1 cut(s) 594
SalI GTCGAC 1 cut(s) 572
SapI GCTCTTC 2 cut(s) 405, 1066
SaqAI TTAA 1 cut(s) 372
Sau3AI GATC 5 cut(s) 505, 626, 859, 880, 963
Sau96I GGNCC 2 cut(s) 604, 605
SchI GAGTC 3 cut(s) 155, 579, 1461
ScrFI CCNGG 2 cut(s) 46, 873
SduI GDGCHC 4 cut(s) 608, 1078, 1249, 1296
SfaNI GCATC 8 cut(s) 411, 965, 1000, 1039, 1156, 1198, 1215, 1565
Sfr274I CTCGAG 1 cut(s) 800
SlaI CTCGAG 1 cut(s) 800
SmlI CTYRAG 4 cut(s) 449, 800, 1040, 1365
SmoI CTYRAG 4 cut(s) 449, 800, 1040, 1365
SphI GCATGC 1 cut(s) 1156
SseBI AGGCCT 3 cut(s) 8, 131, 1442
SspI AATATT 1 cut(s) 1108
SspMI CTAG 1 cut(s) 1637
StuI AGGCCT 3 cut(s) 8, 131, 1442
StyD4I CCNGG 2 cut(s) 44, 871
StyI CCWWGG 3 cut(s) 132, 1020, 1443
TaaI ACNGT 2 cut(s) 296, 721
TaiI ACGT 3 cut(s) 60, 1129, 1293
TaqI TCGA 5 cut(s) 252, 315, 573, 708, 801
TauI GCSGC 5 cut(s) 117, 126, 156, 302, 1538
TfiI GAWTC 3 cut(s) 108, 138, 1504
Tru1I TTAA 1 cut(s) 372
Tru9I TTAA 1 cut(s) 372
TscAI CASTG 3 cut(s) 676, 1249, 1266
TseFI GTSAC 3 cut(s) 731, 991, 1273
TseI GCWGC 5 cut(s) 234, 476, 1052, 1238, 1316
Tsp45I GTSAC 3 cut(s) 731, 991, 1273
TspDTI ATGAA 4 cut(s) 572, 835, 1470, 1505
TspGWI ACGGA 2 cut(s) 378, 1512
TspRI CASTG 3 cut(s) 676, 1249, 1266
VneI GTGCAC 1 cut(s) 1245
XapI RAATTY 3 cut(s) 531, 559, 1254
XceI RCATGY 3 cut(s) 1156, 1323, 1535
XhoI CTCGAG 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 573
XspI CTAG 1 cut(s) 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.