pycom13g16950

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0007161
Physical Location & Seq
Forward (+)
12693403 .. 12700339
6937 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1716 bp
ATGGCGGCATCGTTGATACTCTCCCGAAGAATTTCATCTGTGGGCGTTTCTCGCACTCTCAAGGGTCTAGCAGGTAATGTGCGGCCCTCTTGTCTGCACTTGGAATTGAAGGTCGCGGCTTTGATTAATGTTGTTGATAAAACAAAACAGTATAGCAGCTCCAGTGGTACAAAGCAGTTTGATTTTACTGACCTGACTTCTCCTCATACCTGGTATCCAAAAGCTCGAAGTAAGCAGCGCAAGGTTATCCTGCACATGGGTCCCACAAATAGTGGTAAGACGTACAATGCTCTGAAGCGACTGGAATCAAGTCCATCTGGAATATACTGTGGTCCTCTGAGATTGTTGGCTTGGGAGGTTGCAAAACGGTTGAACAAGGCAAAAGTTCCTTGTGATCTTATTACAGGACAAGAGAGAGATGAGGTTGATGGTGCAAAACACAAGGCTGTGACAGTTGAAATGGCTGATGTAACTTCCAGCTACCATTGTGCCGTTGTTGATGAGATTCAGATGTTGAGTTGTAAGACAAGGGGCTTTTCCTTCACACGAGCTCTATTAGGAATATCTGCCGATGAACTTCACCTTTGTGGAGATCCAGCTTCTGTTCCTCTTATTCAGGAAATATTAAAAGTGACCGGTGATCATGTTGAGGTTCACTTCTATGAGAGACTTTCGCCTCTTGTTCCAATGAAGGTTCCTCTCGGCTCTTTTTCCAATATAAGGACAGGCGACTGCATTGTAACCTTTTCACGCCATAAAATATACAAATTAAAGAAAGAAATTGAAACTGTGGGAAAGCATCTTTGTTCGGTTGTTTATGGTTCGCTTCCACCGGAGACTCGAACGAGACAGGCAACCATGTTTAATGATGCAAGCAGCGAGTTTGATGTTCTCGTGGCTAGTGATGCCATCGGGATGGGTCTTAATCTGAACATTTCACGGATCATATTCTCAACAATGATGAAATTTGATGGTTTTGAGATGCGGGAGCTCACTGTACCAGAGGTCAAACAAATTGCAGGAAGAGCCGGCAGGTATGGATCAAAATTTCCTGTTGGTGAAGTGACTTGTTTAAATGCAGATGATTTGTGCTTGCTTCATTCATCGCTAGAATCCCCATCTCCGACTCTTGAGAGTGCTGGATTATTTCCTACCTTTGATCTTATGTATATGTATTCACGTTTACACCCAGAATGCGGCCTCTACCAAATTCTGGAACATTTTTTAGAGCATGCCAAATTATCAGACAATTATTTTATTGCTGACTGTGAAGAAGTATTGAAAGTTGCTGCTGTTATTGATGCATTGCCTCTTGGGTTGCATGATAAGTACCTTTTCTGCATAAGCCCAGTTGACATGGATGACGAAATTTCATCCCAGGGTCTTACGCAGTTTGCACAAAATTATGCACAAAAGGGCATTGTTCGGCTCCGGGAAATATTCACACCAGGATCACTTAAGGTACCAAAAACGGAAGCTGCACTCAAGGAGCTTGAATCCATTCACAAGGTTTTGGATTTATACGTTTGGTTGAGTTTCCGATTGGAGGAATCATTTCCTGACCGCGAGCTTGCATCTACACAGAAGTCCATCTGCAGCATGTTGATCGAAGACTTTCTGGAGAGGTTAGGATGGCAGAAGCCGAGAAGCAAGAGATTAGCCTCACGTACTCCCTCAACTTTACTATTGTCCCGGAAAGCCAGACCGTACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

572

Amino Acids

63.71

Weight (kDa)

8.39

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEXQc_Suv3 PF22527 68 - 221 1.4e-65 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 241 - 347 2.4e-11 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 429 - 470 1.5e-10 Suv3 C-terminal domain 1
SUV3_C PF12513 495 - 542 1.6e-16 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 62, 1023
Acc65I GGTACC 1 cut(s) 1462
AccB1I GGYRCC 1 cut(s) 1462
AccB7I CCANNNNNTGG 1 cut(s) 1213
AccII CGCG 2 cut(s) 116, 1566
AciI CCGC 6 cut(s) 5, 82, 116, 985, 1197, 1564
AclWI GGATC 4 cut(s) 587, 950, 1048, 1459
AcsI RAATTY 5 cut(s) 30, 965, 1046, 1209, 1368
AcuI CTGAAG 1 cut(s) 314
AfaI GTAC 7 cut(s) 169, 284, 999, 1331, 1464, 1669, 1709
AfiI CCNNNNNNNGG 5 cut(s) 256, 720, 1196, 1213, 1546
AflII CTTAAG 1 cut(s) 1457
AgeI ACCGGT 1 cut(s) 635
AgsI TTSAA 6 cut(s) 109, 373, 458, 785, 1282, 1496
AjnI CCWGG 3 cut(s) 209, 1377, 1447
AleI CACNNNNGTG 1 cut(s) 585
AluBI AGCT 9 cut(s) 159, 224, 480, 551, 599, 991, 1478, 1492, 1570
AluI AGCT 9 cut(s) 159, 224, 480, 551, 599, 991, 1478, 1492, 1570
Alw21I GWGCWC 2 cut(s) 553, 993
Alw26I GTCTC 3 cut(s) 661, 830, 841
AlwI GGATC 4 cut(s) 587, 950, 1048, 1459
AlwNI CAGNNNCTG 1 cut(s) 602
AoxI GGCC 2 cut(s) 83, 1198
ApeKI GCWGC 6 cut(s) 156, 235, 876, 1289, 1478, 1596
ApoI RAATTY 5 cut(s) 30, 965, 1046, 1209, 1368
AseI ATTAAT 1 cut(s) 126
AsiGI ACCGGT 1 cut(s) 635
Asp700I GAANNNNTTC 4 cut(s) 31, 1500, 1554, 1614
Asp718I GGTACC 1 cut(s) 1462
AspLEI GCGC 1 cut(s) 240
AspS9I GGNCC 3 cut(s) 84, 260, 332
AsuC2I CCSGG 2 cut(s) 1433, 1693
AsuHPI GGTGA 3 cut(s) 572, 650, 1070
AvaII GGWCC 2 cut(s) 260, 332
BanI GGYRCC 1 cut(s) 1462
BanII GRGCYC 2 cut(s) 553, 993
BauI CACGAG 2 cut(s) 546, 893
BbsI GAAGAC 1 cut(s) 1617
Bbv12I GWGCWC 2 cut(s) 553, 993
BbvI GCAGC 6 cut(s) 168, 247, 888, 1276, 1465, 1608
BccI CCATC 8 cut(s) 322, 422, 910, 917, 965, 1126, 1598, 1626
BceAI ACGGC 1 cut(s) 476
BcgI CGANNNNNNTGC 2 cut(s) 1588, 1622
BciT130I CCWGG 3 cut(s) 211, 1379, 1449
BciVI GTATCC 1 cut(s) 225
BclI TGATCA 1 cut(s) 640
BcnI CCSGG 2 cut(s) 1433, 1693
BcoDI GTCTC 3 cut(s) 661, 830, 841
BfaI CTAG 3 cut(s) 68, 900, 1109
BfmI CTRYAG 1 cut(s) 1594
BfrI CTTAAG 1 cut(s) 1457
BfuAI ACCTGC 2 cut(s) 62, 1023
BfuI GTATCC 1 cut(s) 225
Bme1390I CCNGG 5 cut(s) 211, 1379, 1433, 1449, 1693
Bme18I GGWCC 2 cut(s) 260, 332
BmgT120I GGNCC 3 cut(s) 84, 260, 332
BmiI GGNNCC 5 cut(s) 261, 262, 696, 1430, 1464
BmrFI CCNGG 5 cut(s) 211, 1379, 1433, 1449, 1693
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 7 cut(s) 17, 808, 859, 895, 972, 1291, 1583
BmuI ACTGGG 1 cut(s) 1343
BpiI GAAGAC 1 cut(s) 1617
BpmI CTGGAG 2 cut(s) 145, 1640
BpuEI CTTGAG 3 cut(s) 44, 1151, 1469
BpuMI CCSGG 2 cut(s) 1433, 1693
BsaAI YACGTR 1 cut(s) 1667
BsaJI CCNNGG 2 cut(s) 1377, 1378
BsaWI WCCGGW 2 cut(s) 635, 832
Bsc4I CCNNNNNNNGG 5 cut(s) 256, 720, 1196, 1213, 1546
Bse118I RCCGGY 2 cut(s) 635, 1028
Bse1I ACTGG 3 cut(s) 162, 306, 1349
Bse3DI GCAATG 1 cut(s) 1304
BseBI CCWGG 3 cut(s) 211, 1379, 1449
BseDI CCNNGG 2 cut(s) 1377, 1378
BseGI GGATG 4 cut(s) 921, 1366, 1373, 1637
BseLI CCNNNNNNNGG 5 cut(s) 256, 720, 1196, 1213, 1546
BseMI GCAATG 1 cut(s) 1304
BseMII CTCAG 1 cut(s) 329
BseNI ACTGG 3 cut(s) 162, 306, 1349
BseRI GAGGAG 1 cut(s) 192
BseXI GCAGC 6 cut(s) 168, 247, 888, 1276, 1465, 1608
BsgI GTGCAG 3 cut(s) 80, 236, 1464
Bsh1236I CGCG 2 cut(s) 116, 1566
BshFI GGCC 2 cut(s) 85, 1200
BshNI GGYRCC 1 cut(s) 1462
BshTI ACCGGT 1 cut(s) 635
BsiHKAI GWGCWC 2 cut(s) 553, 993
BsiSI CCGG 5 cut(s) 636, 833, 1029, 1432, 1693
BslFI GGGAC 2 cut(s) 246, 1675
BslI CCNNNNNNNGG 5 cut(s) 256, 720, 1196, 1213, 1546
BsmAI GTCTC 3 cut(s) 661, 830, 841
BsmFI GGGAC 2 cut(s) 246, 1675
BsmI GAATGC 1 cut(s) 1199
BsnI GGCC 2 cut(s) 85, 1200
Bsp1286I GDGCHC 2 cut(s) 553, 993
Bsp143I GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
BspACI CCGC 6 cut(s) 5, 82, 116, 985, 1197, 1564
BspANI GGCC 2 cut(s) 85, 1200
BspCNI CTCAG 1 cut(s) 330
BspFNI CGCG 2 cut(s) 116, 1566
BspLI GGNNCC 5 cut(s) 261, 262, 696, 1430, 1464
BspMAI CTGCAG 1 cut(s) 1598
BspMI ACCTGC 2 cut(s) 62, 1023
BspPI GGATC 4 cut(s) 587, 950, 1048, 1459
BspQI GCTCTTC 1 cut(s) 1018
BspT107I GGYRCC 1 cut(s) 1462
BspTI CTTAAG 1 cut(s) 1457
BsrDI GCAATG 1 cut(s) 1304
BsrFI RCCGGY 2 cut(s) 635, 1028
BsrI ACTGG 3 cut(s) 162, 306, 1349
BssAI RCCGGY 2 cut(s) 635, 1028
BssECI CCNNGG 2 cut(s) 1377, 1378
BssMI GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
BssSI CACGAG 2 cut(s) 546, 893
Bst2BI CACGAG 2 cut(s) 546, 893
Bst2UI CCWGG 3 cut(s) 211, 1379, 1449
Bst4CI ACNGT 8 cut(s) 150, 329, 369, 454, 790, 997, 1268, 1707
Bst6I CTCTTC 1 cut(s) 1018
BstAFI CTTAAG 1 cut(s) 1457
BstBAI YACGTR 1 cut(s) 1667
BstC8I GCNNGC 6 cut(s) 874, 1030, 1094, 1233, 1568, 1572
BstDEI CTNAG 1 cut(s) 338
BstF5I GGATG 4 cut(s) 921, 1366, 1373, 1637
BstFNI CGCG 2 cut(s) 116, 1566
BstHHI GCGC 1 cut(s) 240
BstKTI GATC 8 cut(s) 397, 595, 643, 945, 1043, 1162, 1454, 1608
BstMAI GTCTC 3 cut(s) 661, 830, 841
BstMBI GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
BstMWI GCNNNNNNNGC 3 cut(s) 51, 905, 1025
BstNI CCWGG 3 cut(s) 211, 1379, 1449
BstNSI RCATGY 2 cut(s) 1235, 1603
BstSCI CCNGG 5 cut(s) 209, 1377, 1431, 1447, 1691
BstSFI CTRYAG 1 cut(s) 1594
BstUI CGCG 2 cut(s) 116, 1566
BstV1I GCAGC 6 cut(s) 168, 247, 888, 1276, 1465, 1608
BstV2I GAAGAC 1 cut(s) 1617
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 1 cut(s) 916
BstYI RGATCY 1 cut(s) 592
BsuI GTATCC 1 cut(s) 225
BsuRI GGCC 2 cut(s) 85, 1200
BtgZI GCGATG 1 cut(s) 1089
BtsCI GGATG 4 cut(s) 921, 1366, 1373, 1637
BtsIMutI CAGTG 2 cut(s) 169, 993
BveI ACCTGC 2 cut(s) 62, 1023
Cac8I GCNNGC 6 cut(s) 874, 1030, 1094, 1233, 1568, 1572
CaiI CAGNNNCTG 1 cut(s) 602
CfoI GCGC 1 cut(s) 240
Cfr10I RCCGGY 2 cut(s) 635, 1028
Cfr13I GGNCC 3 cut(s) 84, 260, 332
CsiI ACCWGGT 1 cut(s) 209
Csp6I GTAC 7 cut(s) 168, 283, 998, 1330, 1463, 1668, 1708
CspAI ACCGGT 1 cut(s) 635
CviAII CATG 7 cut(s) 256, 644, 859, 1232, 1322, 1357, 1600
CviQI GTAC 7 cut(s) 168, 283, 998, 1330, 1463, 1668, 1708
DdeI CTNAG 1 cut(s) 338
DpnI GATC 8 cut(s) 396, 594, 642, 944, 1042, 1161, 1453, 1607
DpnII GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
DraI TTTAAA 1 cut(s) 1074
Eam1104I CTCTTC 1 cut(s) 1018
EarI CTCTTC 1 cut(s) 1018
Ecl136II GAGCTC 2 cut(s) 551, 991
Eco24I GRGCYC 2 cut(s) 553, 993
Eco47I GGWCC 2 cut(s) 260, 332
Eco53kI GAGCTC 2 cut(s) 551, 991
Eco57I CTGAAG 1 cut(s) 314
EcoICRI GAGCTC 2 cut(s) 551, 991
EcoO109I RGGNCCY 1 cut(s) 260
EcoRII CCWGG 3 cut(s) 209, 1377, 1447
EcoT22I ATGCAT 1 cut(s) 1306
EcoT38I GRGCYC 2 cut(s) 553, 993
FaeI CATG 7 cut(s) 259, 647, 862, 1235, 1325, 1360, 1603
FaqI GGGAC 2 cut(s) 246, 1675
FatI CATG 7 cut(s) 255, 643, 858, 1231, 1321, 1356, 1599
FauI CCCGC 1 cut(s) 978
FbaI TGATCA 1 cut(s) 640
FokI GGATG 4 cut(s) 928, 1360, 1373, 1644
FriOI GRGCYC 2 cut(s) 553, 993
FspBI CTAG 3 cut(s) 68, 900, 1109
GlaI GCGC 1 cut(s) 239
GsuI CTGGAG 2 cut(s) 145, 1640
HaeIII GGCC 2 cut(s) 85, 1200
HapII CCGG 5 cut(s) 636, 833, 1029, 1432, 1693
HhaI GCGC 1 cut(s) 240
Hin1II CATG 7 cut(s) 259, 647, 862, 1235, 1325, 1360, 1603
Hin6I GCGC 1 cut(s) 238
HinP1I GCGC 1 cut(s) 238
HincII GTYRAC 1 cut(s) 1354
HindII GTYRAC 1 cut(s) 1354
HinfI GANTC 7 cut(s) 305, 505, 838, 1112, 1126, 1496, 1550
HpaII CCGG 5 cut(s) 636, 833, 1029, 1432, 1693
HphI GGTGA 3 cut(s) 572, 650, 1070
Hpy166II GTNNAC 3 cut(s) 655, 1184, 1354
Hpy188I TCNGA 7 cut(s) 294, 339, 510, 930, 1125, 1246, 1541
Hpy188III TCNNGA 8 cut(s) 24, 318, 617, 913, 1130, 1214, 1559, 1619
Hpy8I GTNNAC 3 cut(s) 655, 1184, 1354
HpyAV CCTTC 3 cut(s) 103, 550, 685
HpyCH4III ACNGT 8 cut(s) 150, 329, 369, 454, 790, 997, 1268, 1707
HpyCH4IV ACGT 4 cut(s) 281, 1180, 1524, 1666
HpyF10VI GCNNNNNNNGC 3 cut(s) 51, 905, 1025
HpyF3I CTNAG 1 cut(s) 338
HpySE526I ACGT 4 cut(s) 281, 1180, 1524, 1666
Hsp92II CATG 7 cut(s) 259, 647, 862, 1235, 1325, 1360, 1603
HspAI GCGC 1 cut(s) 238
KflI GGGWCCC 1 cut(s) 260
KpnI GGTACC 1 cut(s) 1466
KroI GCCGGC 1 cut(s) 1028
KroNI GCCGGC 1 cut(s) 1030
Ksp22I TGATCA 1 cut(s) 640
Kzo9I GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
LguI GCTCTTC 1 cut(s) 1018
LmnI GCTCC 4 cut(s) 164, 988, 1434, 1489
Lsp1109I GCAGC 6 cut(s) 168, 247, 888, 1276, 1465, 1608
LweI GCATC 7 cut(s) 17, 808, 859, 895, 972, 1291, 1583
MabI ACCWGGT 1 cut(s) 209
MaeI CTAG 3 cut(s) 68, 900, 1109
MaeII ACGT 4 cut(s) 281, 1180, 1524, 1666
MaeIII GTNAC 5 cut(s) 448, 469, 631, 739, 1063
MalI GATC 8 cut(s) 396, 594, 642, 944, 1042, 1161, 1453, 1607
MboI GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
MboII GAAGA 4 cut(s) 39, 1035, 1283, 1622
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 2 cut(s) 553, 993
MlyI GAGTC 2 cut(s) 832, 1120
MmeI TCCRAC 1 cut(s) 1148
Mph1103I ATGCAT 1 cut(s) 1306
MroNI GCCGGC 1 cut(s) 1028
MroXI GAANNNNTTC 4 cut(s) 31, 1500, 1554, 1614
MseI TTAA 7 cut(s) 126, 626, 770, 864, 924, 1073, 1458
MslI CAYNNNNRTG 3 cut(s) 585, 660, 914
MspCI CTTAAG 1 cut(s) 1457
MspI CCGG 5 cut(s) 636, 833, 1029, 1432, 1693
MspR9I CCNGG 5 cut(s) 211, 1379, 1433, 1449, 1693
Mva1269I GAATGC 1 cut(s) 1199
MvaI CCWGG 3 cut(s) 211, 1379, 1449
MvnI CGCG 2 cut(s) 116, 1566
MwoI GCNNNNNNNGC 3 cut(s) 51, 905, 1025
NaeI GCCGGC 1 cut(s) 1030
NciI CCSGG 2 cut(s) 1433, 1693
NdeII GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
NgoMIV GCCGGC 1 cut(s) 1028
NlaIII CATG 7 cut(s) 259, 647, 862, 1235, 1325, 1360, 1603
NlaIV GGNNCC 5 cut(s) 261, 262, 696, 1430, 1464
NmeAIII GCCGAG 2 cut(s) 681, 1668
NmuCI GTSAC 3 cut(s) 448, 631, 1063
NsiI ATGCAT 1 cut(s) 1306
NspI RCATGY 2 cut(s) 1235, 1603
OliI CACNNNNGTG 1 cut(s) 585
PaeI GCATGC 1 cut(s) 1235
PasI CCCWGGG 1 cut(s) 1378
PciSI GCTCTTC 1 cut(s) 1018
PctI GAATGC 1 cut(s) 1199
PdiI GCCGGC 1 cut(s) 1030
PdmI GAANNNNTTC 4 cut(s) 31, 1500, 1554, 1614
PfeI GAWTC 5 cut(s) 305, 505, 1112, 1496, 1550
PflMI CCANNNNNTGG 1 cut(s) 1213
PfoI TCCNGGA 2 cut(s) 1431, 1691
PinAI ACCGGT 1 cut(s) 635
PleI GAGTC 2 cut(s) 832, 1120
PpsI GAGTC 2 cut(s) 832, 1120
Ppu21I YACGTR 1 cut(s) 1667
PpuMI RGGWCCY 1 cut(s) 260
PshBI ATTAAT 1 cut(s) 126
Psp124BI GAGCTC 2 cut(s) 553, 993
Psp5II RGGWCCY 1 cut(s) 260
Psp6I CCWGG 3 cut(s) 209, 1377, 1447
PspGI CCWGG 3 cut(s) 209, 1377, 1447
PspN4I GGNNCC 5 cut(s) 261, 262, 696, 1430, 1464
PspPI GGNCC 3 cut(s) 84, 260, 332
PspPPI RGGWCCY 1 cut(s) 260
PstI CTGCAG 1 cut(s) 1598
PstNI CAGNNNCTG 1 cut(s) 602
PsuI RGATCY 1 cut(s) 592
RsaI GTAC 7 cut(s) 169, 284, 999, 1331, 1464, 1669, 1709
RsaNI GTAC 7 cut(s) 168, 283, 998, 1330, 1463, 1668, 1708
RseI CAYNNNNRTG 3 cut(s) 585, 660, 914
SacI GAGCTC 2 cut(s) 553, 993
SapI GCTCTTC 1 cut(s) 1018
SaqAI TTAA 7 cut(s) 126, 626, 770, 864, 924, 1073, 1458
Sau3AI GATC 8 cut(s) 394, 592, 640, 942, 1040, 1159, 1451, 1605
Sau96I GGNCC 3 cut(s) 84, 260, 332
SchI GAGTC 2 cut(s) 832, 1120
ScrFI CCNGG 5 cut(s) 211, 1379, 1433, 1449, 1693
SduI GDGCHC 2 cut(s) 553, 993
SexAI ACCWGGT 1 cut(s) 209
SfaNI GCATC 7 cut(s) 17, 808, 859, 895, 972, 1291, 1583
SfcI CTRYAG 1 cut(s) 1594
SinI GGWCC 2 cut(s) 260, 332
SmiMI CAYNNNNRTG 3 cut(s) 585, 660, 914
SmlI CTYRAG 4 cut(s) 59, 1130, 1457, 1484
SmoI CTYRAG 4 cut(s) 59, 1130, 1457, 1484
SphI GCATGC 1 cut(s) 1235
SsiI CCGC 6 cut(s) 5, 82, 116, 985, 1197, 1564
SspI AATATT 2 cut(s) 624, 1440
SspMI CTAG 3 cut(s) 68, 900, 1109
SstI GAGCTC 2 cut(s) 553, 993
StyD4I CCNGG 5 cut(s) 209, 1377, 1431, 1447, 1691
TaaI ACNGT 8 cut(s) 150, 329, 369, 454, 790, 997, 1268, 1707
TaiI ACGT 4 cut(s) 284, 1183, 1527, 1669
TaqI TCGA 3 cut(s) 226, 841, 1608
TauI GCSGC 4 cut(s) 8, 85, 119, 1200
TfiI GAWTC 5 cut(s) 305, 505, 1112, 1496, 1550
Tru1I TTAA 7 cut(s) 126, 626, 770, 864, 924, 1073, 1458
Tru9I TTAA 7 cut(s) 126, 626, 770, 864, 924, 1073, 1458
TscAI CASTG 2 cut(s) 169, 1000
TseFI GTSAC 3 cut(s) 448, 631, 1063
TseI GCWGC 6 cut(s) 156, 235, 876, 1289, 1478, 1596
Tsp45I GTSAC 3 cut(s) 448, 631, 1063
TspDTI ATGAA 7 cut(s) 24, 588, 704, 977, 1088, 1092, 1362
TspGWI ACGGA 2 cut(s) 955, 1487
TspRI CASTG 2 cut(s) 169, 1000
Van91I CCANNNNNTGG 1 cut(s) 1213
Vha464I CTTAAG 1 cut(s) 1457
VpaK11BI GGWCC 2 cut(s) 260, 332
VspI ATTAAT 1 cut(s) 126
XapI RAATTY 5 cut(s) 30, 965, 1046, 1209, 1368
XceI RCATGY 2 cut(s) 1235, 1603
XmnI GAANNNNTTC 4 cut(s) 31, 1500, 1554, 1614
XspI CTAG 3 cut(s) 68, 900, 1109
Zsp2I ATGCAT 1 cut(s) 1306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.