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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1116600.v1.1 |
| pyrus_communis | pycom07g12140 pycom08g18400 pycom13g27360 pycom13g27370 pycom17g18000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 173 |
| AccB1I | GGYRCC | 2 cut(s) | 913, 2093 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 587 |
| AccII | CGCG | 2 cut(s) | 455, 1772 |
| AciI | CCGC | 6 cut(s) | 70, 453, 455, 845, 1578, 1772 |
| AclI | AACGTT | 2 cut(s) | 166, 372 |
| AcoI | YGGCCR | 3 cut(s) | 483, 578, 721 |
| AcsI | RAATTY | 7 cut(s) | 148, 319, 476, 500, 824, 1685, 1739 |
| AcuI | CTGAAG | 1 cut(s) | 1452 |
| AdeI | CACNNNGTG | 1 cut(s) | 86 |
| AfaI | GTAC | 6 cut(s) | 690, 1582, 1600, 1722, 1923, 1933 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 54, 76, 587, 719, 1841 |
| AflII | CTTAAG | 1 cut(s) | 272 |
| AflIII | ACRYGT | 1 cut(s) | 1466 |
| AgeI | ACCGGT | 1 cut(s) | 1841 |
| AgsI | TTSAA | 9 cut(s) | 319, 506, 648, 830, 1047, 1613, 1739, 1871, 2039 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 215, 247 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 946, 978 |
| AluBI | AGCT | 7 cut(s) | 16, 113, 229, 442, 461, 510, 2147 |
| AluI | AGCT | 7 cut(s) | 16, 113, 229, 442, 461, 510, 2147 |
| Alw21I | GWGCWC | 2 cut(s) | 338, 463 |
| Alw26I | GTCTC | 5 cut(s) | 776, 1028, 1364, 1494, 1828 |
| AoxI | GGCC | 6 cut(s) | 483, 578, 589, 721, 1076, 1606 |
| ApoI | RAATTY | 7 cut(s) | 148, 319, 476, 500, 824, 1685, 1739 |
| AseI | ATTAAT | 1 cut(s) | 294 |
| AsiGI | ACCGGT | 1 cut(s) | 1841 |
| AspLEI | GCGC | 1 cut(s) | 1772 |
| AspS9I | GGNCC | 3 cut(s) | 287, 606, 1054 |
| AsuHPI | GGTGA | 7 cut(s) | 37, 58, 621, 885, 1432, 1465, 1760 |
| AsuII | TTCGAA | 1 cut(s) | 234 |
| AvaII | GGWCC | 3 cut(s) | 287, 606, 1054 |
| BaeGI | GKGCMC | 1 cut(s) | 2096 |
| BalI | TGGCCA | 1 cut(s) | 580 |
| BanI | GGYRCC | 2 cut(s) | 913, 2093 |
| BanII | GRGCYC | 1 cut(s) | 463 |
| Bbv12I | GWGCWC | 2 cut(s) | 338, 463 |
| BceAI | ACGGC | 1 cut(s) | 697 |
| BcoDI | GTCTC | 5 cut(s) | 776, 1028, 1364, 1494, 1828 |
| BfaI | CTAG | 7 cut(s) | 239, 879, 897, 960, 1508, 1535, 1716 |
| BfrI | CTTAAG | 1 cut(s) | 272 |
| BisI | GCNGC | 2 cut(s) | 453, 845 |
| BlsI | GCNGC | 2 cut(s) | 454, 846 |
| BmcAI | AGTACT | 1 cut(s) | 1933 |
| Bme18I | GGWCC | 3 cut(s) | 287, 606, 1054 |
| BmgT120I | GGNCC | 3 cut(s) | 287, 606, 1054 |
| BmiI | GGNNCC | 7 cut(s) | 288, 915, 1055, 1056, 1223, 1300, 2095 |
| BmrI | ACTGGG | 3 cut(s) | 629, 772, 1052 |
| BmsI | GCATC | 1 cut(s) | 1656 |
| BmuI | ACTGGG | 3 cut(s) | 629, 772, 1052 |
| Bpu14I | TTCGAA | 1 cut(s) | 234 |
| BpuEI | CTTGAG | 1 cut(s) | 1135 |
| Bsa29I | ATCGAT | 2 cut(s) | 977, 1343 |
| BsaJI | CCNNGG | 8 cut(s) | 453, 713, 1384, 1416, 1449, 1603, 2002, 2168 |
| BsaWI | WCCGGW | 2 cut(s) | 631, 1841 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 894, 924, 946, 976, 2016, 2046 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 54, 76, 587, 719, 1841 |
| Bse118I | RCCGGY | 1 cut(s) | 1841 |
| Bse1I | ACTGG | 8 cut(s) | 608, 624, 767, 1058, 1300, 1588, 1736, 1895 |
| BseCI | ATCGAT | 2 cut(s) | 977, 1343 |
| BseDI | CCNNGG | 8 cut(s) | 453, 713, 1384, 1416, 1449, 1603, 2002, 2168 |
| BseGI | GGATG | 1 cut(s) | 2019 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 54, 76, 587, 719, 1841 |
| BseMII | CTCAG | 2 cut(s) | 390, 1556 |
| BseNI | ACTGG | 8 cut(s) | 608, 624, 767, 1058, 1300, 1588, 1736, 1895 |
| BseRI | GAGGAG | 3 cut(s) | 915, 1291, 1991 |
| BseSI | GKGCMC | 1 cut(s) | 2096 |
| Bsh1236I | CGCG | 2 cut(s) | 455, 1772 |
| BshFI | GGCC | 6 cut(s) | 485, 580, 591, 723, 1078, 1608 |
| BshNI | GGYRCC | 2 cut(s) | 913, 2093 |
| BshTI | ACCGGT | 1 cut(s) | 1841 |
| BshVI | ATCGAT | 2 cut(s) | 977, 1343 |
| BsiHKAI | GWGCWC | 2 cut(s) | 338, 463 |
| BsiSI | CCGG | 2 cut(s) | 632, 1842 |
| BslFI | GGGAC | 3 cut(s) | 300, 1040, 1117 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 54, 76, 587, 719, 1841 |
| BsmAI | GTCTC | 5 cut(s) | 776, 1028, 1364, 1494, 1828 |
| BsmBI | CGTCTC | 1 cut(s) | 1828 |
| BsmFI | GGGAC | 3 cut(s) | 300, 1040, 1117 |
| BsmI | GAATGC | 1 cut(s) | 1947 |
| BsnI | GGCC | 6 cut(s) | 485, 580, 591, 723, 1078, 1608 |
| Bsp119I | TTCGAA | 1 cut(s) | 234 |
| Bsp1286I | GDGCHC | 3 cut(s) | 338, 463, 2096 |
| Bsp143I | GATC | 1 cut(s) | 805 |
| Bsp19I | CCATGG | 2 cut(s) | 1603, 2168 |
| BspACI | CCGC | 6 cut(s) | 70, 453, 455, 845, 1578, 1772 |
| BspANI | GGCC | 6 cut(s) | 485, 580, 591, 723, 1078, 1608 |
| BspCNI | CTCAG | 2 cut(s) | 391, 1557 |
| BspDI | ATCGAT | 2 cut(s) | 977, 1343 |
| BspFNI | CGCG | 2 cut(s) | 455, 1772 |
| BspLI | GGNNCC | 7 cut(s) | 288, 915, 1055, 1056, 1223, 1300, 2095 |
| BspT104I | TTCGAA | 1 cut(s) | 234 |
| BspT107I | GGYRCC | 2 cut(s) | 913, 2093 |
| BspTI | CTTAAG | 1 cut(s) | 272 |
| BsrFI | RCCGGY | 1 cut(s) | 1841 |
| BsrI | ACTGG | 8 cut(s) | 608, 624, 767, 1058, 1300, 1588, 1736, 1895 |
| BssAI | RCCGGY | 1 cut(s) | 1841 |
| BssECI | CCNNGG | 8 cut(s) | 453, 713, 1384, 1416, 1449, 1603, 2002, 2168 |
| BssMI | GATC | 1 cut(s) | 805 |
| BssT1I | CCWWGG | 5 cut(s) | 1384, 1416, 1449, 1603, 2168 |
| Bst4CI | ACNGT | 4 cut(s) | 1185, 1325, 1554, 1918 |
| Bst6I | CTCTTC | 2 cut(s) | 674, 1831 |
| BstAFI | CTTAAG | 1 cut(s) | 272 |
| BstBI | TTCGAA | 1 cut(s) | 234 |
| BstDEI | CTNAG | 5 cut(s) | 399, 966, 1565, 1595, 2065 |
| BstDSI | CCRYGG | 4 cut(s) | 453, 713, 1603, 2168 |
| BstF5I | GGATG | 1 cut(s) | 2019 |
| BstFNI | CGCG | 2 cut(s) | 455, 1772 |
| BstHHI | GCGC | 1 cut(s) | 1772 |
| BstKTI | GATC | 1 cut(s) | 808 |
| BstMAI | GTCTC | 5 cut(s) | 776, 1028, 1364, 1494, 1828 |
| BstMBI | GATC | 1 cut(s) | 805 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 458, 751, 1203 |
| BstNSI | RCATGY | 1 cut(s) | 1470 |
| BstSLI | GKGCMC | 1 cut(s) | 2096 |
| BstUI | CGCG | 2 cut(s) | 455, 1772 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 762 |
| Bsu15I | ATCGAT | 2 cut(s) | 977, 1343 |
| BsuRI | GGCC | 6 cut(s) | 485, 580, 591, 723, 1078, 1608 |
| BsuTUI | ATCGAT | 2 cut(s) | 977, 1343 |
| BtgI | CCRYGG | 4 cut(s) | 453, 713, 1603, 2168 |
| BtgZI | GCGATG | 2 cut(s) | 202, 1187 |
| BtsCI | GGATG | 1 cut(s) | 2019 |
| BtsI | GCAGTG | 1 cut(s) | 1270 |
| BtsIMutI | CAGTG | 4 cut(s) | 1065, 1270, 1293, 1923 |
| CfoI | GCGC | 1 cut(s) | 1772 |
| Cfr10I | RCCGGY | 1 cut(s) | 1841 |
| Cfr13I | GGNCC | 3 cut(s) | 287, 606, 1054 |
| Cfr42I | CCGCGG | 1 cut(s) | 456 |
| ClaI | ATCGAT | 2 cut(s) | 977, 1343 |
| Csp6I | GTAC | 6 cut(s) | 689, 1581, 1599, 1721, 1922, 1932 |
| CspAI | ACCGGT | 1 cut(s) | 1841 |
| CviQI | GTAC | 6 cut(s) | 689, 1581, 1599, 1721, 1922, 1932 |
| DdeI | CTNAG | 5 cut(s) | 399, 966, 1565, 1595, 2065 |
| DpnI | GATC | 1 cut(s) | 807 |
| DpnII | GATC | 1 cut(s) | 805 |
| DraIII | CACNNNGTG | 1 cut(s) | 86 |
| EaeI | YGGCCR | 3 cut(s) | 483, 578, 721 |
| Eam1104I | CTCTTC | 2 cut(s) | 674, 1831 |
| EarI | CTCTTC | 2 cut(s) | 674, 1831 |
| Ecl136II | GAGCTC | 1 cut(s) | 461 |
| Eco130I | CCWWGG | 5 cut(s) | 1384, 1416, 1449, 1603, 2168 |
| Eco24I | GRGCYC | 1 cut(s) | 463 |
| Eco32I | GATATC | 1 cut(s) | 1877 |
| Eco47I | GGWCC | 3 cut(s) | 287, 606, 1054 |
| Eco53kI | GAGCTC | 1 cut(s) | 461 |
| Eco57I | CTGAAG | 1 cut(s) | 1452 |
| EcoICRI | GAGCTC | 1 cut(s) | 461 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1054 |
| EcoRV | GATATC | 1 cut(s) | 1877 |
| EcoT14I | CCWWGG | 5 cut(s) | 1384, 1416, 1449, 1603, 2168 |
| EcoT22I | ATGCAT | 1 cut(s) | 1947 |
| EcoT38I | GRGCYC | 1 cut(s) | 463 |
| ErhI | CCWWGG | 5 cut(s) | 1384, 1416, 1449, 1603, 2168 |
| Esp3I | CGTCTC | 1 cut(s) | 1828 |
| FaqI | GGGAC | 3 cut(s) | 300, 1040, 1117 |
| FauI | CCCGC | 2 cut(s) | 77, 448 |
| FauNDI | CATATG | 1 cut(s) | 2028 |
| Fnu4HI | GCNGC | 2 cut(s) | 453, 845 |
| FokI | GGATG | 1 cut(s) | 2006 |
| FriOI | GRGCYC | 1 cut(s) | 463 |
| Fsp4HI | GCNGC | 2 cut(s) | 453, 845 |
| FspBI | CTAG | 7 cut(s) | 239, 879, 897, 960, 1508, 1535, 1716 |
| GlaI | GCGC | 1 cut(s) | 1771 |
| GluI | GCNGC | 2 cut(s) | 453, 845 |
| HaeIII | GGCC | 6 cut(s) | 485, 580, 591, 723, 1078, 1608 |
| HapII | CCGG | 2 cut(s) | 632, 1842 |
| HhaI | GCGC | 1 cut(s) | 1772 |
| Hin6I | GCGC | 1 cut(s) | 1770 |
| HinP1I | GCGC | 1 cut(s) | 1770 |
| HincII | GTYRAC | 4 cut(s) | 370, 396, 415, 706 |
| HindII | GTYRAC | 4 cut(s) | 370, 396, 415, 706 |
| HindIII | AAGCTT | 1 cut(s) | 508 |
| HinfI | GANTC | 5 cut(s) | 416, 445, 733, 1775, 1780 |
| HpaI | GTTAAC | 1 cut(s) | 706 |
| HpaII | CCGG | 2 cut(s) | 632, 1842 |
| HphI | GGTGA | 7 cut(s) | 37, 58, 621, 885, 1432, 1465, 1760 |
| Hpy166II | GTNNAC | 5 cut(s) | 370, 396, 415, 706, 1157 |
| Hpy188I | TCNGA | 9 cut(s) | 109, 468, 614, 1432, 1550, 1566, 1852, 2006, 2180 |
| Hpy188III | TCNNGA | 7 cut(s) | 668, 697, 1361, 1535, 1613, 1651, 1716 |
| Hpy8I | GTNNAC | 5 cut(s) | 370, 396, 415, 706, 1157 |
| Hpy99I | CGWCG | 2 cut(s) | 674, 1533 |
| HpyAV | CCTTC | 6 cut(s) | 957, 994, 1610, 1619, 1965, 2045 |
| HpyCH4III | ACNGT | 4 cut(s) | 1185, 1325, 1554, 1918 |
| HpyCH4IV | ACGT | 6 cut(s) | 144, 166, 178, 372, 838, 1093 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 269, 1009, 1263, 1330, 1392, 1945, 2046 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 458, 751, 1203 |
| HpyF3I | CTNAG | 5 cut(s) | 399, 966, 1565, 1595, 2065 |
| HpySE526I | ACGT | 6 cut(s) | 144, 166, 178, 372, 838, 1093 |
| HspAI | GCGC | 1 cut(s) | 1770 |
| KflI | GGGWCCC | 1 cut(s) | 1054 |
| KspAI | GTTAAC | 1 cut(s) | 706 |
| KspI | CCGCGG | 1 cut(s) | 456 |
| Kzo9I | GATC | 1 cut(s) | 805 |
| LmnI | GCTCC | 5 cut(s) | 43, 333, 458, 1304, 2037 |
| LweI | GCATC | 1 cut(s) | 1656 |
| MaeI | CTAG | 7 cut(s) | 239, 879, 897, 960, 1508, 1535, 1716 |
| MaeII | ACGT | 6 cut(s) | 144, 166, 178, 372, 838, 1093 |
| MaeIII | GTNAC | 5 cut(s) | 599, 1375, 1420, 1453, 1748 |
| MalI | GATC | 1 cut(s) | 807 |
| MboI | GATC | 1 cut(s) | 805 |
| MboII | GAAGA | 6 cut(s) | 585, 691, 996, 1180, 1818, 1851 |
| MfeI | CAATTG | 1 cut(s) | 1784 |
| MhlI | GDGCHC | 3 cut(s) | 338, 463, 2096 |
| MlsI | TGGCCA | 1 cut(s) | 580 |
| MluNI | TGGCCA | 1 cut(s) | 580 |
| MlyI | GAGTC | 4 cut(s) | 410, 727, 1769, 1774 |
| MmeI | TCCRAC | 3 cut(s) | 1434, 1581, 2020 |
| Mox20I | TGGCCA | 1 cut(s) | 580 |
| Mph1103I | ATGCAT | 1 cut(s) | 1947 |
| MscI | TGGCCA | 1 cut(s) | 580 |
| MseI | TTAA | 7 cut(s) | 273, 294, 407, 705, 1073, 1689, 1800 |
| MslI | CAYNNNNRTG | 3 cut(s) | 33, 1465, 1652 |
| Msp20I | TGGCCA | 1 cut(s) | 580 |
| MspA1I | CMGCKG | 2 cut(s) | 455, 847 |
| MspCI | CTTAAG | 1 cut(s) | 272 |
| MspI | CCGG | 2 cut(s) | 632, 1842 |
| MunI | CAATTG | 1 cut(s) | 1784 |
| Mva1269I | GAATGC | 1 cut(s) | 1947 |
| MvnI | CGCG | 2 cut(s) | 455, 1772 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 458, 751, 1203 |
| NcoI | CCATGG | 2 cut(s) | 1603, 2168 |
| NdeI | CATATG | 1 cut(s) | 2028 |
| NdeII | GATC | 1 cut(s) | 805 |
| NlaIV | GGNNCC | 7 cut(s) | 288, 915, 1055, 1056, 1223, 1300, 2095 |
| NmeAIII | GCCGAG | 2 cut(s) | 448, 453 |
| NmuCI | GTSAC | 5 cut(s) | 599, 1375, 1420, 1453, 1748 |
| NsiI | ATGCAT | 1 cut(s) | 1947 |
| NspI | RCATGY | 1 cut(s) | 1470 |
| NspV | TTCGAA | 1 cut(s) | 234 |
| PciI | ACATGT | 1 cut(s) | 1466 |
| PctI | GAATGC | 1 cut(s) | 1947 |
| PfeI | GAWTC | 1 cut(s) | 445 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 587 |
| PinAI | ACCGGT | 1 cut(s) | 1841 |
| PkrI | GCNGC | 2 cut(s) | 454, 846 |
| PleI | GAGTC | 4 cut(s) | 410, 727, 1769, 1774 |
| PpsI | GAGTC | 4 cut(s) | 410, 727, 1769, 1774 |
| PpuMI | RGGWCCY | 1 cut(s) | 1054 |
| PscI | ACATGT | 1 cut(s) | 1466 |
| PshBI | ATTAAT | 1 cut(s) | 294 |
| PsiI | TTATAA | 1 cut(s) | 173 |
| Psp124BI | GAGCTC | 1 cut(s) | 463 |
| Psp1406I | AACGTT | 2 cut(s) | 166, 372 |
| Psp5II | RGGWCCY | 1 cut(s) | 1054 |
| PspN4I | GGNNCC | 7 cut(s) | 288, 915, 1055, 1056, 1223, 1300, 2095 |
| PspPI | GGNCC | 3 cut(s) | 287, 606, 1054 |
| PspPPI | RGGWCCY | 1 cut(s) | 1054 |
| RsaI | GTAC | 6 cut(s) | 690, 1582, 1600, 1722, 1923, 1933 |
| RsaNI | GTAC | 6 cut(s) | 689, 1581, 1599, 1721, 1922, 1932 |
| RseI | CAYNNNNRTG | 3 cut(s) | 33, 1465, 1652 |
| SacI | GAGCTC | 1 cut(s) | 463 |
| SacII | CCGCGG | 1 cut(s) | 456 |
| SaqAI | TTAA | 7 cut(s) | 273, 294, 407, 705, 1073, 1689, 1800 |
| SatI | GCNGC | 2 cut(s) | 453, 845 |
| Sau3AI | GATC | 1 cut(s) | 805 |
| Sau96I | GGNCC | 3 cut(s) | 287, 606, 1054 |
| ScaI | AGTACT | 1 cut(s) | 1933 |
| SchI | GAGTC | 4 cut(s) | 410, 727, 1769, 1774 |
| SduI | GDGCHC | 3 cut(s) | 338, 463, 2096 |
| SfaNI | GCATC | 1 cut(s) | 1656 |
| Sfr303I | CCGCGG | 1 cut(s) | 456 |
| SfuI | TTCGAA | 1 cut(s) | 234 |
| SgrBI | CCGCGG | 1 cut(s) | 456 |
| SinI | GGWCC | 3 cut(s) | 287, 606, 1054 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 33, 1465, 1652 |
| SmlI | CTYRAG | 2 cut(s) | 272, 1150 |
| SmoI | CTYRAG | 2 cut(s) | 272, 1150 |
| SsiI | CCGC | 6 cut(s) | 70, 453, 455, 845, 1578, 1772 |
| SspI | AATATT | 3 cut(s) | 1140, 1170, 1319 |
| SspMI | CTAG | 7 cut(s) | 239, 879, 897, 960, 1508, 1535, 1716 |
| SstI | GAGCTC | 1 cut(s) | 463 |
| StyI | CCWWGG | 5 cut(s) | 1384, 1416, 1449, 1603, 2168 |
| TaaI | ACNGT | 4 cut(s) | 1185, 1325, 1554, 1918 |
| TaiI | ACGT | 6 cut(s) | 147, 169, 181, 375, 841, 1096 |
| TatI | WGTACW | 2 cut(s) | 1720, 1931 |
| TauI | GCSGC | 2 cut(s) | 455, 847 |
| TfiI | GAWTC | 1 cut(s) | 445 |
| Tru1I | TTAA | 7 cut(s) | 273, 294, 407, 705, 1073, 1689, 1800 |
| Tru9I | TTAA | 7 cut(s) | 273, 294, 407, 705, 1073, 1689, 1800 |
| TscAI | CASTG | 4 cut(s) | 1065, 1270, 1300, 1923 |
| TseFI | GTSAC | 5 cut(s) | 599, 1375, 1420, 1453, 1748 |
| Tsp45I | GTSAC | 5 cut(s) | 599, 1375, 1420, 1453, 1748 |
| TspGWI | ACGGA | 4 cut(s) | 263, 346, 353, 1810 |
| TspRI | CASTG | 4 cut(s) | 1065, 1270, 1300, 1923 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 587 |
| Vha464I | CTTAAG | 1 cut(s) | 272 |
| VpaK11BI | GGWCC | 3 cut(s) | 287, 606, 1054 |
| VspI | ATTAAT | 1 cut(s) | 294 |
| XapI | RAATTY | 7 cut(s) | 148, 319, 476, 500, 824, 1685, 1739 |
| XbaI | TCTAGA | 2 cut(s) | 1534, 1715 |
| XceI | RCATGY | 1 cut(s) | 1470 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 616, 1902 |
| XspI | CTAG | 7 cut(s) | 239, 879, 897, 960, 1508, 1535, 1716 |
| ZrmI | AGTACT | 1 cut(s) | 1933 |
| Zsp2I | ATGCAT | 1 cut(s) | 1947 |