pycom14g05980

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
5798057 .. 5798438
382 bp
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UTR
Exon/CDS
Intron
pycom14g05980.3

Sequence Viewer

Length: 255 bp
ATGCATTATGTTAGAATCTGTAGGGAGAAAGCAACTTGTCACGTATATGCAATGAAGAAGCTTAAGAAATTAGTGGAACATATGAAAGTTGAGAGGAATCTACTTGTTGAGGTTGATAGTAATTGTATTGTCAAGCTTTATTGTTCGTTCCAGAATGAAGAGTACTTGTATCTAATTATGGAATATCTTCCTAGTTGGGATATGATGACTTTATTGATGTGCAAGGACACATTGACAAAAGATGAAGCTTGTTGA

Protein Analysis

85

Amino Acids

10.12

Weight (kDa)

6.8

Isoelectric Point (pI)

33.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021139)

Species Orthologous Gene IDs
malus_domestica MD15G1269700.v1.1 MD16G1194900.v1.1
pyrus_communis pycom14g05980 pycom17g09670
rosa_multiflora Rmu_co8294415.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 164
AflII CTTAAG 1 cut(s) 62
AluBI AGCT 3 cut(s) 61, 136, 248
AluI AGCT 3 cut(s) 61, 136, 248
Asp700I GAANNNNTTC 1 cut(s) 186
BfaI CTAG 1 cut(s) 192
BfmI CTRYAG 1 cut(s) 19
BfrI CTTAAG 1 cut(s) 62
BmcAI AGTACT 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 43
Bse3DI GCAATG 1 cut(s) 57
BseMI GCAATG 1 cut(s) 57
BspTI CTTAAG 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 57
Bst6I CTCTTC 1 cut(s) 153
BstAFI CTTAAG 1 cut(s) 62
BstBAI YACGTR 1 cut(s) 43
BstSFI CTRYAG 1 cut(s) 19
Csp6I GTAC 1 cut(s) 163
CviJI RGCY 3 cut(s) 61, 136, 248
CviKI_1 RGCY 3 cut(s) 61, 136, 248
CviQI GTAC 1 cut(s) 163
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
EcoT22I ATGCAT 1 cut(s) 6
FaiI YATR 7 cut(s) 9, 46, 48, 81, 83, 179, 203
FauNDI CATATG 1 cut(s) 81
FspBI CTAG 1 cut(s) 192
HindIII AAGCTT 3 cut(s) 59, 134, 246
HinfI GANTC 2 cut(s) 15, 97
Hpy188III TCNNGA 1 cut(s) 151
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 3 cut(s) 4, 50, 222
HpySE526I ACGT 1 cut(s) 42
LpnPI CCDG 1 cut(s) 164
MaeI CTAG 1 cut(s) 192
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 1 cut(s) 38
MboII GAAGA 3 cut(s) 67, 170, 179
MluCI AATT 3 cut(s) 68, 121, 174
MnlI CCTC 2 cut(s) 87, 103
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 186
MseI TTAA 1 cut(s) 63
MslI CAYNNNNRTG 1 cut(s) 45
MspCI CTTAAG 1 cut(s) 62
NdeI CATATG 1 cut(s) 81
NmuCI GTSAC 1 cut(s) 38
NsiI ATGCAT 1 cut(s) 6
PdmI GAANNNNTTC 1 cut(s) 186
PfeI GAWTC 2 cut(s) 15, 97
Ppu21I YACGTR 1 cut(s) 43
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
RseI CAYNNNNRTG 1 cut(s) 45
SaqAI TTAA 1 cut(s) 63
ScaI AGTACT 1 cut(s) 164
SetI ASST 5 cut(s) 45, 63, 114, 138, 250
SfcI CTRYAG 1 cut(s) 19
SgeI CNNG 8 cut(s) 48, 53, 116, 145, 163, 178, 204, 235
SmiMI CAYNNNNRTG 1 cut(s) 45
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
Sse9I AATT 3 cut(s) 68, 121, 174
SspMI CTAG 1 cut(s) 192
TaiI ACGT 1 cut(s) 45
TasI AATT 3 cut(s) 68, 121, 174
TatI WGTACW 1 cut(s) 162
TfiI GAWTC 2 cut(s) 15, 97
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TseFI GTSAC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 38
TspDTI ATGAA 3 cut(s) 68, 98, 171
Vha464I CTTAAG 1 cut(s) 62
XmnI GAANNNNTTC 1 cut(s) 186
XspI CTAG 1 cut(s) 192
ZrmI AGTACT 1 cut(s) 164
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.