Rmu_co8294415.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8294415.1
Physical Location & Seq
Reverse (-)
392 .. 727
336 bp
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UTR
Exon/CDS
Intron
Rmu_co8294415.1_g000001.1.cds

Sequence Viewer

Length: 336 bp
atgattcttaatacttatactttttccatttctctctggaaggtggagcatgttaaagcagaaagaaatcttcttgctgaggttgatagtgcttacattgtcaagctctattgctcctttcaagatgatgaatttttgtatcttataatggaatatcttccgggaggtgacatgatgacattactaatgcgcaaagatatcttgactgaagatgaagcaaggttttatgtaggagagactgtgcttgccattgagtctattcacaagcacaactacattcacaggttttacctcaattctttgttcattgctgagttggatcacacataccattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

13.22

Weight (kDa)

5.06

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021139)

Species Orthologous Gene IDs
malus_domestica MD15G1269700.v1.1 MD16G1194900.v1.1
pyrus_communis pycom14g05980 pycom17g09670
rosa_multiflora Rmu_co8294415.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
Acc16I TGCGCA 1 cut(s) 191
AclWI GGATC 1 cut(s) 327
AcsI RAATTY 1 cut(s) 131
AcuI CTGAAG 1 cut(s) 228
AgsI TTSAA 1 cut(s) 122
AluBI AGCT 1 cut(s) 106
AluI AGCT 1 cut(s) 106
Alw26I GTCTC 1 cut(s) 230
AlwI GGATC 1 cut(s) 327
ApoI RAATTY 1 cut(s) 131
Asp700I GAANNNNTTC 1 cut(s) 156
AspLEI GCGC 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 162
AsuHPI GGTGA 1 cut(s) 179
BbvCI CCTCAGC 1 cut(s) 78
BcnI CCSGG 1 cut(s) 162
BcoDI GTCTC 1 cut(s) 230
Bme1390I CCNGG 1 cut(s) 162
BmrFI CCNGG 1 cut(s) 162
Bpu10I CCTNAGC 1 cut(s) 78
BpuMI CCSGG 1 cut(s) 162
BsaXI ACNNNNNCTCC 2 cut(s) 225, 255
Bse3DI GCAATG 1 cut(s) 306
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 2 cut(s) 69, 303
BsiSI CCGG 1 cut(s) 161
BsmAI GTCTC 1 cut(s) 230
Bsp143I GATC 1 cut(s) 319
BspCNI CTCAG 2 cut(s) 70, 304
BspPI GGATC 1 cut(s) 327
BsrDI GCAATG 1 cut(s) 306
BssMI GATC 1 cut(s) 319
Bst4CI ACNGT 1 cut(s) 241
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 2 cut(s) 78, 312
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 1 cut(s) 322
BstMAI GTCTC 1 cut(s) 230
BstMBI GATC 1 cut(s) 319
BstNSI RCATGY 1 cut(s) 53
BstSCI CCNGG 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 246
CfoI GCGC 1 cut(s) 192
CviAII CATG 2 cut(s) 50, 172
CviJI RGCY 1 cut(s) 106
CviKI_1 RGCY 1 cut(s) 106
DdeI CTNAG 2 cut(s) 78, 312
DpnI GATC 1 cut(s) 321
DpnII GATC 1 cut(s) 319
Eco32I GATATC 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 228
EcoRV GATATC 1 cut(s) 199
FaeI CATG 2 cut(s) 53, 175
FaiI YATR 6 cut(s) 18, 51, 146, 173, 228, 328
FatI CATG 2 cut(s) 49, 171
FspI TGCGCA 1 cut(s) 191
GlaI GCGC 1 cut(s) 191
HapII CCGG 1 cut(s) 161
HhaI GCGC 1 cut(s) 192
Hin1II CATG 2 cut(s) 53, 175
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HinfI GANTC 2 cut(s) 4, 254
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 179
Hpy188III TCNNGA 3 cut(s) 37, 122, 202
HpyAV CCTTC 1 cut(s) 34
HpyCH4III ACNGT 1 cut(s) 241
HpyF3I CTNAG 2 cut(s) 78, 312
Hsp92II CATG 2 cut(s) 53, 175
HspAI GCGC 1 cut(s) 190
Kzo9I GATC 1 cut(s) 319
LmnI GCTCC 2 cut(s) 46, 119
LpnPI CCDG 3 cut(s) 22, 174, 268
MaeIII GTNAC 1 cut(s) 167
MalI GATC 1 cut(s) 321
MboI GATC 1 cut(s) 319
MboII GAAGA 3 cut(s) 62, 149, 221
MluCI AATT 2 cut(s) 131, 295
MlyI GAGTC 1 cut(s) 263
MmeI TCCRAC 1 cut(s) 297
MnlI CCTC 3 cut(s) 73, 158, 302
MroXI GAANNNNTTC 1 cut(s) 156
MseI TTAA 2 cut(s) 9, 54
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 162
NciI CCSGG 1 cut(s) 162
NdeII GATC 1 cut(s) 319
NlaIII CATG 2 cut(s) 53, 175
NmuCI GTSAC 1 cut(s) 167
NsbI TGCGCA 1 cut(s) 191
NspI RCATGY 1 cut(s) 53
PdmI GAANNNNTTC 1 cut(s) 156
PfeI GAWTC 1 cut(s) 4
PfoI TCCNGGA 1 cut(s) 160
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PsiI TTATAA 1 cut(s) 146
SaqAI TTAA 2 cut(s) 9, 54
Sau3AI GATC 1 cut(s) 319
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 1 cut(s) 162
SetI ASST 7 cut(s) 45, 84, 108, 169, 224, 287, 294
Sse9I AATT 2 cut(s) 131, 295
StyD4I CCNGG 1 cut(s) 160
TaaI ACNGT 1 cut(s) 241
TasI AATT 2 cut(s) 131, 295
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 2 cut(s) 9, 54
Tru9I TTAA 2 cut(s) 9, 54
TseFI GTSAC 1 cut(s) 167
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 3 cut(s) 144, 228, 295
XapI RAATTY 1 cut(s) 131
XceI RCATGY 1 cut(s) 53
XmnI GAANNNNTTC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.