No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G41950 |
| fragaria_vesca | FvH4_5g10960 FvH4_5g10960 |
| malus_domestica | MD06G1118100.v1.1 MD14G1126200.v1.1 |
| prunus_persica | Prupe.5G129200_v2.0.a1 Prupe.5G129200_v2.0.a1 |
| pyrus_communis | pycom06g10980 pycom14g11090 |
| rosa_chinensis | RchiOBHm_Chr7g0186861 |
| rosa_laevigata | RLG00000004809 |
| rosa_multiflora | Rmu_ssc0000024.1_g000032 |
| rosa_roxburghii | Rroxscaffold_3G00267760 |
| rosa_rugosa | Rorug06G0477500 Rorug06G0477500 |
| rosa_samantha | Rh7AG083300 Rh7BG079500 Rh7CG084300 Rh7DG085200 |
| rosa_wichuraiana | Rw7G007330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 498 |
| Acc16I | TGCGCA | 1 cut(s) | 408 |
| Acc36I | ACCTGC | 3 cut(s) | 468, 1414, 1679 |
| Acc65I | GGTACC | 1 cut(s) | 602 |
| AccB1I | GGYRCC | 2 cut(s) | 253, 602 |
| AccIII | TCCGGA | 1 cut(s) | 412 |
| AciI | CCGC | 3 cut(s) | 1285, 1343, 1349 |
| AclWI | GGATC | 7 cut(s) | 29, 76, 152, 344, 357, 376, 1180 |
| AcoI | YGGCCR | 1 cut(s) | 336 |
| AcsI | RAATTY | 1 cut(s) | 1613 |
| AcuI | CTGAAG | 3 cut(s) | 440, 707, 927 |
| AcyI | GRCGYC | 1 cut(s) | 495 |
| AdeI | CACNNNGTG | 1 cut(s) | 1553 |
| AfaI | GTAC | 6 cut(s) | 153, 442, 604, 667, 895, 1452 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1349, 1556 |
| AgeI | ACCGGT | 2 cut(s) | 250, 328 |
| AgsI | TTSAA | 4 cut(s) | 475, 1252, 1402, 1418 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 619 |
| AjiI | CACGTC | 1 cut(s) | 136 |
| AjnI | CCWGG | 3 cut(s) | 397, 972, 1549 |
| Alw26I | GTCTC | 2 cut(s) | 450, 627 |
| AlwI | GGATC | 7 cut(s) | 29, 76, 152, 344, 357, 376, 1180 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 197, 404 |
| Ama87I | CYCGRG | 2 cut(s) | 275, 1665 |
| Aor13HI | TCCGGA | 1 cut(s) | 412 |
| AoxI | GGCC | 3 cut(s) | 291, 336, 1558 |
| ApeKI | GCWGC | 8 cut(s) | 404, 572, 647, 1079, 1090, 1235, 1238, 1484 |
| ApoI | RAATTY | 1 cut(s) | 1613 |
| AsiGI | ACCGGT | 2 cut(s) | 250, 328 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1413 |
| Asp718I | GGTACC | 1 cut(s) | 602 |
| AspLEI | GCGC | 4 cut(s) | 226, 409, 715, 1016 |
| AspS9I | GGNCC | 1 cut(s) | 1583 |
| AsuHPI | GGTGA | 2 cut(s) | 370, 1188 |
| AvaI | CYCGRG | 2 cut(s) | 275, 1665 |
| AvaII | GGWCC | 1 cut(s) | 1583 |
| BaeGI | GKGCMC | 1 cut(s) | 827 |
| BamHI | GGATCC | 1 cut(s) | 349 |
| BanI | GGYRCC | 2 cut(s) | 253, 602 |
| BanII | GRGCYC | 2 cut(s) | 91, 234 |
| BauI | CACGAG | 1 cut(s) | 1029 |
| BbvCI | CCTCAGC | 1 cut(s) | 1149 |
| BbvI | GCAGC | 8 cut(s) | 391, 559, 634, 1077, 1091, 1225, 1247, 1496 |
| BccI | CCATC | 3 cut(s) | 1616, 1620, 1664 |
| BceAI | ACGGC | 1 cut(s) | 423 |
| BciT130I | CCWGG | 3 cut(s) | 399, 974, 1551 |
| BclI | TGATCA | 1 cut(s) | 585 |
| BcoDI | GTCTC | 2 cut(s) | 450, 627 |
| BfaI | CTAG | 3 cut(s) | 300, 663, 1646 |
| BfmI | CTRYAG | 2 cut(s) | 1001, 1091 |
| BfoI | RGCGCY | 2 cut(s) | 227, 716 |
| BfuAI | ACCTGC | 3 cut(s) | 468, 1414, 1679 |
| BisI | GCNGC | 9 cut(s) | 405, 573, 648, 1080, 1091, 1236, 1239, 1286, 1485 |
| BlsI | GCNGC | 9 cut(s) | 406, 574, 649, 1081, 1092, 1237, 1240, 1287, 1486 |
| Bme1390I | CCNGG | 3 cut(s) | 399, 974, 1551 |
| Bme18I | GGWCC | 1 cut(s) | 1583 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 619 |
| BmeT110I | CYCGRG | 2 cut(s) | 275, 1665 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 1 cut(s) | 1583 |
| BmiI | GGNNCC | 9 cut(s) | 231, 249, 255, 309, 351, 508, 604, 1503, 1585 |
| BmrFI | CCNGG | 3 cut(s) | 399, 974, 1551 |
| BmrI | ACTGGG | 2 cut(s) | 997, 1176 |
| BmsI | GCATC | 5 cut(s) | 331, 418, 763, 829, 1624 |
| BmuI | ACTGGG | 2 cut(s) | 997, 1176 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 78, 110, 539, 571 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1149 |
| BpuEI | CTTGAG | 1 cut(s) | 803 |
| Bsa29I | ATCGAT | 2 cut(s) | 1055, 1384 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1380 |
| BsaHI | GRCGYC | 1 cut(s) | 495 |
| BsaI | GGTCTC | 2 cut(s) | 450, 627 |
| BsaJI | CCNNGG | 5 cut(s) | 345, 397, 972, 1123, 1456 |
| BsaWI | WCCGGW | 6 cut(s) | 244, 250, 262, 304, 328, 412 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1349, 1556 |
| Bse118I | RCCGGY | 2 cut(s) | 250, 328 |
| Bse1I | ACTGG | 5 cut(s) | 281, 604, 965, 992, 1171 |
| Bse3DI | GCAATG | 2 cut(s) | 582, 1230 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1380 |
| BseAI | TCCGGA | 1 cut(s) | 412 |
| BseBI | CCWGG | 3 cut(s) | 399, 974, 1551 |
| BseCI | ATCGAT | 2 cut(s) | 1055, 1384 |
| BseDI | CCNNGG | 5 cut(s) | 345, 397, 972, 1123, 1456 |
| BseGI | GGATG | 4 cut(s) | 409, 778, 1180, 1631 |
| BseJI | GATNNNNATC | 1 cut(s) | 1380 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1349, 1556 |
| BseMI | GCAATG | 2 cut(s) | 582, 1230 |
| BseMII | CTCAG | 3 cut(s) | 570, 1024, 1140 |
| BseNI | ACTGG | 5 cut(s) | 281, 604, 965, 992, 1171 |
| BseRI | GAGGAG | 2 cut(s) | 83, 800 |
| BseSI | GKGCMC | 1 cut(s) | 827 |
| BseXI | GCAGC | 8 cut(s) | 391, 559, 634, 1077, 1091, 1225, 1247, 1496 |
| BsgI | GTGCAG | 7 cut(s) | 116, 753, 1011, 1098, 1224, 1323, 1575 |
| Bsh1285I | CGRYCG | 2 cut(s) | 619, 1388 |
| BshFI | GGCC | 3 cut(s) | 293, 338, 1560 |
| BshNI | GGYRCC | 2 cut(s) | 253, 602 |
| BshTI | ACCGGT | 2 cut(s) | 250, 328 |
| BshVI | ATCGAT | 2 cut(s) | 1055, 1384 |
| BsiEI | CGRYCG | 2 cut(s) | 619, 1388 |
| BsiHKCI | CYCGRG | 2 cut(s) | 275, 1665 |
| BsiSI | CCGG | 8 cut(s) | 227, 245, 251, 263, 287, 305, 329, 413 |
| BslFI | GGGAC | 1 cut(s) | 954 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1349, 1556 |
| BsmAI | GTCTC | 2 cut(s) | 450, 627 |
| BsmFI | GGGAC | 1 cut(s) | 954 |
| BsnI | GGCC | 3 cut(s) | 293, 338, 1560 |
| Bso31I | GGTCTC | 2 cut(s) | 450, 627 |
| BsoBI | CYCGRG | 2 cut(s) | 275, 1665 |
| Bsp1286I | GDGCHC | 3 cut(s) | 91, 234, 827 |
| Bsp13I | TCCGGA | 1 cut(s) | 412 |
| BspACI | CCGC | 3 cut(s) | 1285, 1343, 1349 |
| BspANI | GGCC | 3 cut(s) | 293, 338, 1560 |
| BspCNI | CTCAG | 3 cut(s) | 569, 1023, 1141 |
| BspDI | ATCGAT | 2 cut(s) | 1055, 1384 |
| BspEI | TCCGGA | 1 cut(s) | 412 |
| BspHI | TCATGA | 1 cut(s) | 835 |
| BspLI | GGNNCC | 9 cut(s) | 231, 249, 255, 309, 351, 508, 604, 1503, 1585 |
| BspMAI | CTGCAG | 2 cut(s) | 1005, 1095 |
| BspMI | ACCTGC | 3 cut(s) | 468, 1414, 1679 |
| BspPI | GGATC | 7 cut(s) | 29, 76, 152, 344, 357, 376, 1180 |
| BspT107I | GGYRCC | 2 cut(s) | 253, 602 |
| BspTNI | GGTCTC | 2 cut(s) | 450, 627 |
| BsrDI | GCAATG | 2 cut(s) | 582, 1230 |
| BsrFI | RCCGGY | 2 cut(s) | 250, 328 |
| BsrI | ACTGG | 5 cut(s) | 281, 604, 965, 992, 1171 |
| BssAI | RCCGGY | 2 cut(s) | 250, 328 |
| BssECI | CCNNGG | 5 cut(s) | 345, 397, 972, 1123, 1456 |
| BssNI | GRCGYC | 1 cut(s) | 495 |
| BssSI | CACGAG | 1 cut(s) | 1029 |
| BssT1I | CCWWGG | 2 cut(s) | 1123, 1456 |
| Bst2BI | CACGAG | 1 cut(s) | 1029 |
| Bst2UI | CCWGG | 3 cut(s) | 399, 974, 1551 |
| Bst4CI | ACNGT | 7 cut(s) | 64, 524, 530, 617, 968, 1132, 1274 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstACI | GRCGYC | 1 cut(s) | 495 |
| BstC8I | GCNNGC | 5 cut(s) | 793, 924, 996, 1347, 1558 |
| BstDEI | CTNAG | 7 cut(s) | 464, 556, 651, 768, 1010, 1149, 1160 |
| BstDSI | CCRYGG | 1 cut(s) | 345 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1554 |
| BstF5I | GGATG | 4 cut(s) | 409, 778, 1180, 1631 |
| BstH2I | RGCGCY | 2 cut(s) | 227, 716 |
| BstHHI | GCGC | 4 cut(s) | 226, 409, 715, 1016 |
| BstMAI | GTCTC | 2 cut(s) | 450, 627 |
| BstMCI | CGRYCG | 2 cut(s) | 619, 1388 |
| BstNI | CCWGG | 3 cut(s) | 399, 974, 1551 |
| BstNSI | RCATGY | 3 cut(s) | 1247, 1465, 1530 |
| BstSCI | CCNGG | 3 cut(s) | 397, 972, 1549 |
| BstSFI | CTRYAG | 2 cut(s) | 1001, 1091 |
| BstSLI | GKGCMC | 1 cut(s) | 827 |
| BstV1I | GCAGC | 8 cut(s) | 391, 559, 634, 1077, 1091, 1225, 1247, 1496 |
| BstX2I | RGATCY | 4 cut(s) | 21, 157, 349, 1172 |
| BstYI | RGATCY | 4 cut(s) | 21, 157, 349, 1172 |
| Bsu15I | ATCGAT | 2 cut(s) | 1055, 1384 |
| BsuRI | GGCC | 3 cut(s) | 293, 338, 1560 |
| BsuTUI | ATCGAT | 2 cut(s) | 1055, 1384 |
| BtgI | CCRYGG | 1 cut(s) | 345 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| BtsCI | GGATG | 4 cut(s) | 409, 778, 1180, 1631 |
| BtsI | GCAGTG | 1 cut(s) | 954 |
| BtsIMutI | CAGTG | 3 cut(s) | 288, 535, 954 |
| BveI | ACCTGC | 3 cut(s) | 468, 1414, 1679 |
| Cac8I | GCNNGC | 5 cut(s) | 793, 924, 996, 1347, 1558 |
| CaiI | CAGNNNCTG | 2 cut(s) | 197, 404 |
| CciI | TCATGA | 1 cut(s) | 835 |
| CfoI | GCGC | 4 cut(s) | 226, 409, 715, 1016 |
| Cfr10I | RCCGGY | 2 cut(s) | 250, 328 |
| Cfr13I | GGNCC | 1 cut(s) | 1583 |
| ClaI | ATCGAT | 2 cut(s) | 1055, 1384 |
| CseI | GACGC | 1 cut(s) | 704 |
| CsiI | ACCWGGT | 1 cut(s) | 1549 |
| Csp6I | GTAC | 6 cut(s) | 152, 441, 603, 666, 894, 1451 |
| CspAI | ACCGGT | 2 cut(s) | 250, 328 |
| CviAII | CATG | 6 cut(s) | 836, 1244, 1462, 1527, 1580, 1608 |
| CviQI | GTAC | 6 cut(s) | 152, 441, 603, 666, 894, 1451 |
| DdeI | CTNAG | 7 cut(s) | 464, 556, 651, 768, 1010, 1149, 1160 |
| DraIII | CACNNNGTG | 1 cut(s) | 1553 |
| DriI | GACNNNNNGTC | 1 cut(s) | 619 |
| EaeI | YGGCCR | 1 cut(s) | 336 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 619 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco130I | CCWWGG | 2 cut(s) | 1123, 1456 |
| Eco147I | AGGCCT | 1 cut(s) | 1560 |
| Eco24I | GRGCYC | 2 cut(s) | 91, 234 |
| Eco31I | GGTCTC | 2 cut(s) | 450, 627 |
| Eco32I | GATATC | 2 cut(s) | 1331, 1510 |
| Eco47I | GGWCC | 1 cut(s) | 1583 |
| Eco57I | CTGAAG | 3 cut(s) | 440, 707, 927 |
| Eco88I | CYCGRG | 2 cut(s) | 275, 1665 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1554 |
| EcoRI | GAATTC | 1 cut(s) | 1613 |
| EcoRII | CCWGG | 3 cut(s) | 397, 972, 1549 |
| EcoRV | GATATC | 2 cut(s) | 1331, 1510 |
| EcoT14I | CCWWGG | 2 cut(s) | 1123, 1456 |
| EcoT38I | GRGCYC | 2 cut(s) | 91, 234 |
| ErhI | CCWWGG | 2 cut(s) | 1123, 1456 |
| FaeI | CATG | 6 cut(s) | 839, 1247, 1465, 1530, 1583, 1611 |
| FaqI | GGGAC | 1 cut(s) | 954 |
| FatI | CATG | 6 cut(s) | 835, 1243, 1461, 1526, 1579, 1607 |
| FauI | CCCGC | 1 cut(s) | 1342 |
| FbaI | TGATCA | 1 cut(s) | 585 |
| Fnu4HI | GCNGC | 9 cut(s) | 405, 573, 648, 1080, 1091, 1236, 1239, 1286, 1485 |
| FokI | GGATG | 4 cut(s) | 396, 785, 1167, 1638 |
| FriOI | GRGCYC | 2 cut(s) | 91, 234 |
| Fsp4HI | GCNGC | 9 cut(s) | 405, 573, 648, 1080, 1091, 1236, 1239, 1286, 1485 |
| FspBI | CTAG | 3 cut(s) | 300, 663, 1646 |
| FspI | TGCGCA | 1 cut(s) | 408 |
| GlaI | GCGC | 4 cut(s) | 225, 408, 714, 1015 |
| GluI | GCNGC | 9 cut(s) | 405, 573, 648, 1080, 1091, 1236, 1239, 1286, 1485 |
| HaeII | RGCGCY | 2 cut(s) | 227, 716 |
| HaeIII | GGCC | 3 cut(s) | 293, 338, 1560 |
| HapII | CCGG | 8 cut(s) | 227, 245, 251, 263, 287, 305, 329, 413 |
| HgaI | GACGC | 1 cut(s) | 704 |
| HhaI | GCGC | 4 cut(s) | 226, 409, 715, 1016 |
| Hin1I | GRCGYC | 1 cut(s) | 495 |
| Hin1II | CATG | 6 cut(s) | 839, 1247, 1465, 1530, 1583, 1611 |
| Hin6I | GCGC | 4 cut(s) | 224, 407, 713, 1014 |
| HinP1I | GCGC | 4 cut(s) | 224, 407, 713, 1014 |
| HinfI | GANTC | 6 cut(s) | 147, 182, 188, 752, 1381, 1604 |
| HpaII | CCGG | 8 cut(s) | 227, 245, 251, 263, 287, 305, 329, 413 |
| HphI | GGTGA | 2 cut(s) | 370, 1188 |
| Hpy166II | GTNNAC | 4 cut(s) | 114, 361, 1270, 1651 |
| Hpy188III | TCNNGA | 9 cut(s) | 139, 413, 448, 683, 725, 749, 836, 1176, 1505 |
| Hpy8I | GTNNAC | 4 cut(s) | 114, 361, 1270, 1651 |
| Hpy99I | CGWCG | 2 cut(s) | 497, 500 |
| HpyAV | CCTTC | 4 cut(s) | 349, 425, 774, 1403 |
| HpyCH4III | ACNGT | 7 cut(s) | 64, 524, 530, 617, 968, 1132, 1274 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 495 |
| HpyF3I | CTNAG | 7 cut(s) | 464, 556, 651, 768, 1010, 1149, 1160 |
| HpySE526I | ACGT | 2 cut(s) | 135, 495 |
| Hsp92I | GRCGYC | 1 cut(s) | 495 |
| Hsp92II | CATG | 6 cut(s) | 839, 1247, 1465, 1530, 1583, 1611 |
| HspAI | GCGC | 4 cut(s) | 224, 407, 713, 1014 |
| Kpn2I | TCCGGA | 1 cut(s) | 412 |
| KpnI | GGTACC | 1 cut(s) | 606 |
| Ksp22I | TGATCA | 1 cut(s) | 585 |
| LmnI | GCTCC | 5 cut(s) | 229, 401, 415, 518, 547 |
| Lsp1109I | GCAGC | 8 cut(s) | 391, 559, 634, 1077, 1091, 1225, 1247, 1496 |
| LweI | GCATC | 5 cut(s) | 331, 418, 763, 829, 1624 |
| MabI | ACCWGGT | 1 cut(s) | 1549 |
| MaeI | CTAG | 3 cut(s) | 300, 663, 1646 |
| MaeII | ACGT | 2 cut(s) | 135, 495 |
| MaeIII | GTNAC | 4 cut(s) | 53, 524, 595, 1696 |
| MboII | GAAGA | 5 cut(s) | 67, 433, 545, 713, 920 |
| MfeI | CAATTG | 4 cut(s) | 706, 1017, 1044, 1359 |
| MflI | RGATCY | 4 cut(s) | 21, 157, 349, 1172 |
| MhlI | GDGCHC | 3 cut(s) | 91, 234, 827 |
| MlyI | GAGTC | 1 cut(s) | 141 |
| MmeI | TCCRAC | 3 cut(s) | 46, 185, 1306 |
| MroI | TCCGGA | 1 cut(s) | 412 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1413 |
| MseI | TTAA | 4 cut(s) | 501, 957, 981, 1320 |
| MspA1I | CMGCKG | 3 cut(s) | 1090, 1238, 1349 |
| MspI | CCGG | 8 cut(s) | 227, 245, 251, 263, 287, 305, 329, 413 |
| MspR9I | CCNGG | 3 cut(s) | 399, 974, 1551 |
| MunI | CAATTG | 4 cut(s) | 706, 1017, 1044, 1359 |
| MvaI | CCWGG | 3 cut(s) | 399, 974, 1551 |
| NlaIII | CATG | 6 cut(s) | 839, 1247, 1465, 1530, 1583, 1611 |
| NlaIV | GGNNCC | 9 cut(s) | 231, 249, 255, 309, 351, 508, 604, 1503, 1585 |
| NsbI | TGCGCA | 1 cut(s) | 408 |
| NspI | RCATGY | 3 cut(s) | 1247, 1465, 1530 |
| PagI | TCATGA | 1 cut(s) | 835 |
| PceI | AGGCCT | 1 cut(s) | 1560 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 369 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1413 |
| PfeI | GAWTC | 5 cut(s) | 182, 188, 752, 1381, 1604 |
| PinAI | ACCGGT | 2 cut(s) | 250, 328 |
| PkrI | GCNGC | 9 cut(s) | 406, 574, 649, 1081, 1092, 1237, 1240, 1287, 1486 |
| Ple19I | CGATCG | 1 cut(s) | 1388 |
| PleI | GAGTC | 1 cut(s) | 141 |
| PpsI | GAGTC | 1 cut(s) | 141 |
| Psp6I | CCWGG | 3 cut(s) | 397, 972, 1549 |
| PspGI | CCWGG | 3 cut(s) | 397, 972, 1549 |
| PspN4I | GGNNCC | 9 cut(s) | 231, 249, 255, 309, 351, 508, 604, 1503, 1585 |
| PspPI | GGNCC | 1 cut(s) | 1583 |
| PstI | CTGCAG | 2 cut(s) | 1005, 1095 |
| PstNI | CAGNNNCTG | 2 cut(s) | 197, 404 |
| PsuI | RGATCY | 4 cut(s) | 21, 157, 349, 1172 |
| PvuI | CGATCG | 1 cut(s) | 1388 |
| PvuII | CAGCTG | 2 cut(s) | 1090, 1238 |
| RsaI | GTAC | 6 cut(s) | 153, 442, 604, 667, 895, 1452 |
| RsaNI | GTAC | 6 cut(s) | 152, 441, 603, 666, 894, 1451 |
| SaqAI | TTAA | 4 cut(s) | 501, 957, 981, 1320 |
| SatI | GCNGC | 9 cut(s) | 405, 573, 648, 1080, 1091, 1236, 1239, 1286, 1485 |
| Sau96I | GGNCC | 1 cut(s) | 1583 |
| SchI | GAGTC | 1 cut(s) | 141 |
| ScrFI | CCNGG | 3 cut(s) | 399, 974, 1551 |
| SduI | GDGCHC | 3 cut(s) | 91, 234, 827 |
| SexAI | ACCWGGT | 1 cut(s) | 1549 |
| SfaNI | GCATC | 5 cut(s) | 331, 418, 763, 829, 1624 |
| SfcI | CTRYAG | 2 cut(s) | 1001, 1091 |
| SinI | GGWCC | 1 cut(s) | 1583 |
| SmlI | CTYRAG | 1 cut(s) | 782 |
| SmoI | CTYRAG | 1 cut(s) | 782 |
| SseBI | AGGCCT | 1 cut(s) | 1560 |
| SsiI | CCGC | 3 cut(s) | 1285, 1343, 1349 |
| SspMI | CTAG | 3 cut(s) | 300, 663, 1646 |
| StuI | AGGCCT | 1 cut(s) | 1560 |
| StyD4I | CCNGG | 3 cut(s) | 397, 972, 1549 |
| StyI | CCWWGG | 2 cut(s) | 1123, 1456 |
| TaaI | ACNGT | 7 cut(s) | 64, 524, 530, 617, 968, 1132, 1274 |
| TaiI | ACGT | 2 cut(s) | 138, 498 |
| TaqI | TCGA | 5 cut(s) | 204, 372, 380, 1055, 1384 |
| TaqII | GACCGA | 1 cut(s) | 609 |
| TatI | WGTACW | 1 cut(s) | 665 |
| TauI | GCSGC | 1 cut(s) | 1288 |
| TfiI | GAWTC | 5 cut(s) | 182, 188, 752, 1381, 1604 |
| Tru1I | TTAA | 4 cut(s) | 501, 957, 981, 1320 |
| Tru9I | TTAA | 4 cut(s) | 501, 957, 981, 1320 |
| TscAI | CASTG | 3 cut(s) | 288, 535, 954 |
| TseI | GCWGC | 8 cut(s) | 404, 572, 647, 1079, 1090, 1235, 1238, 1484 |
| TspDTI | ATGAA | 5 cut(s) | 824, 954, 1422, 1568, 1596 |
| TspGWI | ACGGA | 5 cut(s) | 34, 159, 362, 1064, 1631 |
| TspRI | CASTG | 3 cut(s) | 288, 535, 954 |
| VpaK11BI | GGWCC | 1 cut(s) | 1583 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1554 |
| XapI | RAATTY | 1 cut(s) | 1613 |
| XceI | RCATGY | 3 cut(s) | 1247, 1465, 1530 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1413 |
| XspI | CTAG | 3 cut(s) | 300, 663, 1646 |
| ZraI | GACGTC | 1 cut(s) | 496 |