pycom14g11220

Serine hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
14176290 .. 14178992
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1056 bp
ATGAAGGAGATCAAGAAAGGAACTGTGAGATCCACCTTCACGGTCAACTCTACCATTGTTGAAATGCTTCAGGGAAAGATTGGAGGGCAGTATTTGCATCCGATCCCAAGGTGGTCGGATTGCGATTGCAAATTTTGCACATCTTGGACCTCTAATTGCAAAGAAACACTTTTTGTTAAAACAGATGGACCTAGAGAGTATAAGGGACAAGAAGATGTGCTATTCATACATGGGTTCATTTCATCATCAGCATTTTGGACAGAGACATTGTTCCCAAACTTTTCAAGTGCTGCAAAATCAAGTTTTAGACTTTTTGCCATTGATCTGTTAGGGTTTGGGAGGAGTCCAAAGCCAACCGACTCCATGTACACGCTCAGAGAGCATTTGGAGATGATTGAAAGATCTGTGCTCGAACCCAACAAAGTTAAATCCTTCCACATTGTGGCTCATTCTTTGGGTTGCATTATTGCCCTTGCTCTTGCTGTTAAACACCCTTCCTCCATCAAGTCCCTCACCTTGCTTGCACCTCCATACTACCCAATACCGAAGGGTGAACAAGCAACACAGTACGTGATGAGGAGGGTGGCGCCACGGCGGGTGTGGCCGGCGATTGCATTCGGCGCCTCAATTGCTTGCTGGTACGAGCACATCTCAAGAACCATTTGTTTGCTCATTTGCAAGAACCACCGGTTTGTGGAATTTCTTACCAAACTTATCACCAGAAACAGGATAAGGACTTTCTTGCTCGAAGGTTTCTTCTGTCACACCCATAACGCAGCATGGCACACATTGCACAACATTATATGTGGCACCGCCGGCAAGATGGAGAAATACCTAGACGCTGTCCGAGACAATCTAAAATGCGACGTAAATGTGTTTCATGGCAAAGATGATGAACTTATCCCGGTCGAGTGCAGCTACAGCGTGCAATTGAAAATTCCCCGGGCTCGTGTGAAGGTGATTGAGAAGAAGGATCACATTACTGTCGTGGTCGGAAGACAGAAAGCTTTTGCTAGAGAGCTTGAGGAGATTTGGAGAAATTCATCAAGTGGTTAA

Protein Analysis

352

Amino Acids

40.03

Weight (kDa)

9.31

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 73 - 329 4e-28 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 73 - 339 1.1e-16 Alpha/beta hydrolase family
Hydrolase_4 PF12146 73 - 320 4.2e-11 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011322)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 586, 620, 809
AccB7I CCANNNNNTGG 1 cut(s) 442
AciI CCGC 2 cut(s) 595, 813
AclWI GGATC 3 cut(s) 24, 97, 981
AcoI YGGCCR 1 cut(s) 602
AcsI RAATTY 4 cut(s) 131, 698, 936, 1039
AcuI CTGAAG 1 cut(s) 53
AcyI GRCGYC 2 cut(s) 587, 621
AdeI CACNNNGTG 1 cut(s) 442
AfaI GTAC 3 cut(s) 368, 569, 641
AfiI CCNNNNNNNGG 3 cut(s) 442, 694, 726
AgeI ACCGGT 1 cut(s) 687
AgsI TTSAA 4 cut(s) 62, 285, 398, 934
AluBI AGCT 3 cut(s) 918, 1007, 1021
AluI AGCT 3 cut(s) 918, 1007, 1021
Alw21I GWGCWC 2 cut(s) 411, 648
Alw26I GTCTC 2 cut(s) 257, 843
AlwI GGATC 3 cut(s) 24, 97, 981
Ama87I CYCGRG 1 cut(s) 942
AoxI GGCC 1 cut(s) 602
ApeKI GCWGC 3 cut(s) 290, 776, 915
ApoI RAATTY 4 cut(s) 131, 698, 936, 1039
AsiGI ACCGGT 1 cut(s) 687
Asp700I GAANNNNTTC 1 cut(s) 66
AspLEI GCGC 2 cut(s) 589, 623
AspS9I GGNCC 2 cut(s) 147, 188
AsuC2I CCSGG 3 cut(s) 905, 943, 944
AsuHPI GGTGA 4 cut(s) 505, 563, 709, 970
AvaI CYCGRG 1 cut(s) 942
AvaII GGWCC 2 cut(s) 147, 188
BanI GGYRCC 3 cut(s) 586, 620, 809
BanII GRGCYC 1 cut(s) 949
BauI CACGAG 1 cut(s) 948
BbsI GAAGAC 1 cut(s) 1003
Bbv12I GWGCWC 2 cut(s) 411, 648
BbvI GCAGC 3 cut(s) 277, 788, 927
BccI CCATC 3 cut(s) 179, 509, 817
BceAI ACGGC 1 cut(s) 608
BcnI CCSGG 3 cut(s) 905, 943, 944
BcoDI GTCTC 2 cut(s) 257, 843
BfaI CTAG 3 cut(s) 192, 836, 1014
BfmI CTRYAG 1 cut(s) 919
BfoI RGCGCY 2 cut(s) 590, 624
BglII AGATCT 1 cut(s) 401
BisI GCNGC 3 cut(s) 291, 777, 916
BlsI GCNGC 3 cut(s) 292, 778, 917
Bme1390I CCNGG 3 cut(s) 905, 943, 944
Bme18I GGWCC 2 cut(s) 147, 188
BmeT110I CYCGRG 1 cut(s) 942
BmgT120I GGNCC 2 cut(s) 147, 188
BmiI GGNNCC 3 cut(s) 588, 622, 811
BmrFI CCNGG 3 cut(s) 905, 943, 944
BmsI GCATC 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 1003
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpuEI CTTGAG 2 cut(s) 637, 1043
BpuMI CCSGG 3 cut(s) 905, 943, 944
BsaAI YACGTR 1 cut(s) 571
BsaHI GRCGYC 2 cut(s) 587, 621
BsaJI CCNNGG 4 cut(s) 107, 590, 941, 942
BsaWI WCCGGW 1 cut(s) 687
BsaXI ACNNNNNCTCC 2 cut(s) 482, 512
Bsc4I CCNNNNNNNGG 3 cut(s) 442, 694, 726
Bse118I RCCGGY 3 cut(s) 604, 687, 815
Bse3DI GCAATG 1 cut(s) 788
BseDI CCNNGG 4 cut(s) 107, 590, 941, 942
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 3 cut(s) 442, 694, 726
BseMI GCAATG 1 cut(s) 788
BseMII CTCAG 1 cut(s) 388
BseRI GAGGAG 3 cut(s) 355, 592, 1040
BseXI GCAGC 3 cut(s) 277, 788, 927
BsgI GTGCAG 1 cut(s) 934
Bsh1285I CGRYCG 1 cut(s) 909
BshFI GGCC 1 cut(s) 604
BshNI GGYRCC 3 cut(s) 586, 620, 809
BshTI ACCGGT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 909
BsiHKAI GWGCWC 2 cut(s) 411, 648
BsiHKCI CYCGRG 1 cut(s) 942
BsiSI CCGG 5 cut(s) 605, 688, 816, 905, 943
BslFI GGGAC 2 cut(s) 219, 493
BslI CCNNNNNNNGG 3 cut(s) 442, 694, 726
BsmAI GTCTC 2 cut(s) 257, 843
BsmFI GGGAC 2 cut(s) 219, 493
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 1 cut(s) 604
BsoBI CYCGRG 1 cut(s) 942
Bsp1286I GDGCHC 3 cut(s) 411, 648, 949
Bsp1407I TGTACA 1 cut(s) 366
Bsp143I GATC 6 cut(s) 9, 29, 102, 322, 401, 973
BspACI CCGC 2 cut(s) 595, 813
BspANI GGCC 1 cut(s) 604
BspCNI CTCAG 1 cut(s) 387
BspLI GGNNCC 3 cut(s) 588, 622, 811
BspPI GGATC 3 cut(s) 24, 97, 981
BspT107I GGYRCC 3 cut(s) 586, 620, 809
BsrDI GCAATG 1 cut(s) 788
BsrFI RCCGGY 3 cut(s) 604, 687, 815
BsrGI TGTACA 1 cut(s) 366
BssAI RCCGGY 3 cut(s) 604, 687, 815
BssECI CCNNGG 4 cut(s) 107, 590, 941, 942
BssMI GATC 6 cut(s) 9, 29, 102, 322, 401, 973
BssNI GRCGYC 2 cut(s) 587, 621
BssSI CACGAG 1 cut(s) 948
BssT1I CCWWGG 1 cut(s) 107
Bst2BI CACGAG 1 cut(s) 948
Bst4CI ACNGT 4 cut(s) 25, 43, 567, 985
BstACI GRCGYC 2 cut(s) 587, 621
BstAPI GCANNNNNTGC 3 cut(s) 94, 135, 790
BstAUI TGTACA 1 cut(s) 366
BstBAI YACGTR 1 cut(s) 571
BstC8I GCNNGC 5 cut(s) 522, 606, 634, 817, 926
BstDEI CTNAG 1 cut(s) 374
BstDSI CCRYGG 1 cut(s) 590
BstF5I GGATG 1 cut(s) 97
BstH2I RGCGCY 2 cut(s) 590, 624
BstHHI GCGC 2 cut(s) 589, 623
BstKTI GATC 6 cut(s) 12, 32, 105, 325, 404, 976
BstMAI GTCTC 2 cut(s) 257, 843
BstMBI GATC 6 cut(s) 9, 29, 102, 322, 401, 973
BstMCI CGRYCG 1 cut(s) 909
BstMWI GCNNNNNNNGC 9 cut(s) 94, 135, 379, 601, 620, 629, 790, 816, 921
BstSCI CCNGG 3 cut(s) 903, 941, 942
BstSFI CTRYAG 1 cut(s) 919
BstV1I GCAGC 3 cut(s) 277, 788, 927
BstV2I GAAGAC 1 cut(s) 1003
BstX2I RGATCY 2 cut(s) 29, 401
BstYI RGATCY 2 cut(s) 29, 401
BsuRI GGCC 1 cut(s) 604
BtgI CCRYGG 1 cut(s) 590
BtsCI GGATG 1 cut(s) 97
Cac8I GCNNGC 5 cut(s) 522, 606, 634, 817, 926
CfoI GCGC 2 cut(s) 589, 623
Cfr10I RCCGGY 3 cut(s) 604, 687, 815
Cfr13I GGNCC 2 cut(s) 147, 188
Cfr9I CCCGGG 1 cut(s) 942
CseI GACGC 1 cut(s) 848
Csp6I GTAC 3 cut(s) 367, 568, 640
CspAI ACCGGT 1 cut(s) 687
CviAII CATG 4 cut(s) 230, 364, 780, 881
CviJI RGCY 7 cut(s) 352, 446, 604, 918, 947, 1007, 1021
CviKI_1 RGCY 7 cut(s) 352, 446, 604, 918, 947, 1007, 1021
CviQI GTAC 3 cut(s) 367, 568, 640
DdeI CTNAG 1 cut(s) 374
DinI GGCGCC 2 cut(s) 588, 622
DpnI GATC 6 cut(s) 11, 31, 104, 324, 403, 975
DpnII GATC 6 cut(s) 9, 29, 102, 322, 401, 973
DraIII CACNNNGTG 1 cut(s) 442
EaeI YGGCCR 1 cut(s) 602
Eco130I CCWWGG 1 cut(s) 107
Eco24I GRGCYC 1 cut(s) 949
Eco47I GGWCC 2 cut(s) 147, 188
Eco57I CTGAAG 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 942
EcoT14I CCWWGG 1 cut(s) 107
EcoT38I GRGCYC 1 cut(s) 949
EgeI GGCGCC 2 cut(s) 588, 622
EheI GGCGCC 2 cut(s) 588, 622
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 4 cut(s) 233, 367, 783, 884
FalI AAGNNNNNCTT 2 cut(s) 153, 185
FaqI GGGAC 2 cut(s) 219, 493
FatI CATG 4 cut(s) 229, 363, 779, 880
FauI CCCGC 1 cut(s) 588
Fnu4HI GCNGC 3 cut(s) 291, 777, 916
FokI GGATG 1 cut(s) 84
FriOI GRGCYC 1 cut(s) 949
Fsp4HI GCNGC 3 cut(s) 291, 777, 916
FspBI CTAG 3 cut(s) 192, 836, 1014
GlaI GCGC 2 cut(s) 588, 622
GluI GCNGC 3 cut(s) 291, 777, 916
HaeII RGCGCY 2 cut(s) 590, 624
HaeIII GGCC 1 cut(s) 604
HapII CCGG 5 cut(s) 605, 688, 816, 905, 943
HgaI GACGC 1 cut(s) 848
HhaI GCGC 2 cut(s) 589, 623
Hin1I GRCGYC 2 cut(s) 587, 621
Hin1II CATG 4 cut(s) 233, 367, 783, 884
Hin6I GCGC 2 cut(s) 587, 621
HinP1I GCGC 2 cut(s) 587, 621
HincII GTYRAC 1 cut(s) 46
HindII GTYRAC 1 cut(s) 46
HindIII AAGCTT 1 cut(s) 1005
HinfI GANTC 2 cut(s) 343, 359
HpaII CCGG 5 cut(s) 605, 688, 816, 905, 943
HphI GGTGA 4 cut(s) 505, 563, 709, 970
Hpy166II GTNNAC 3 cut(s) 46, 369, 554
Hpy188I TCNGA 5 cut(s) 102, 118, 377, 848, 995
Hpy188III TCNNGA 2 cut(s) 13, 654
Hpy8I GTNNAC 3 cut(s) 46, 369, 554
Hpy99I CGWCG 1 cut(s) 869
HpyAV CCTTC 7 cut(s) 46, 442, 504, 541, 743, 949, 964
HpyCH4III ACNGT 4 cut(s) 25, 43, 567, 985
HpyCH4IV ACGT 2 cut(s) 570, 867
HpyF10VI GCNNNNNNNGC 9 cut(s) 94, 135, 379, 601, 620, 629, 790, 816, 921
HpyF3I CTNAG 1 cut(s) 374
HpySE526I ACGT 2 cut(s) 570, 867
Hsp92I GRCGYC 2 cut(s) 587, 621
Hsp92II CATG 4 cut(s) 233, 367, 783, 884
HspAI GCGC 2 cut(s) 587, 621
KasI GGCGCC 2 cut(s) 586, 620
KroI GCCGGC 2 cut(s) 604, 815
KroNI GCCGGC 2 cut(s) 606, 817
Kzo9I GATC 6 cut(s) 9, 29, 102, 322, 401, 973
LpnPI CCDG 9 cut(s) 56, 618, 622, 701, 712, 733, 829, 918, 956
Lsp1109I GCAGC 3 cut(s) 277, 788, 927
LweI GCATC 1 cut(s) 106
MaeI CTAG 3 cut(s) 192, 836, 1014
MaeII ACGT 2 cut(s) 570, 867
MaeIII GTNAC 1 cut(s) 761
MalI GATC 6 cut(s) 11, 31, 104, 324, 403, 975
MboI GATC 6 cut(s) 9, 29, 102, 322, 401, 973
MboII GAAGA 4 cut(s) 224, 748, 979, 1008
MfeI CAATTG 2 cut(s) 627, 929
MflI RGATCY 2 cut(s) 29, 401
MhlI GDGCHC 3 cut(s) 411, 648, 949
MluCI AATT 7 cut(s) 131, 154, 627, 698, 929, 936, 1039
Mly113I GGCGCC 2 cut(s) 587, 621
MlyI GAGTC 2 cut(s) 352, 353
MmeI TCCRAC 2 cut(s) 96, 973
MroNI GCCGGC 2 cut(s) 604, 815
MroXI GAANNNNTTC 1 cut(s) 66
MseI TTAA 4 cut(s) 177, 426, 486, 1054
MspI CCGG 5 cut(s) 605, 688, 816, 905, 943
MspR9I CCNGG 3 cut(s) 905, 943, 944
MunI CAATTG 2 cut(s) 627, 929
Mva1269I GAATGC 1 cut(s) 614
MwoI GCNNNNNNNGC 9 cut(s) 94, 135, 379, 601, 620, 629, 790, 816, 921
NaeI GCCGGC 2 cut(s) 606, 817
NarI GGCGCC 2 cut(s) 587, 621
NciI CCSGG 3 cut(s) 905, 943, 944
NdeII GATC 6 cut(s) 9, 29, 102, 322, 401, 973
NgoMIV GCCGGC 2 cut(s) 604, 815
NlaIII CATG 4 cut(s) 233, 367, 783, 884
NlaIV GGNNCC 3 cut(s) 588, 622, 811
NmuCI GTSAC 1 cut(s) 761
PctI GAATGC 1 cut(s) 614
PdiI GCCGGC 2 cut(s) 606, 817
PdmI GAANNNNTTC 1 cut(s) 66
PflFI GACNNNGTC 1 cut(s) 842
PflMI CCANNNNNTGG 1 cut(s) 442
PinAI ACCGGT 1 cut(s) 687
PkrI GCNGC 3 cut(s) 292, 778, 917
PleI GAGTC 2 cut(s) 351, 353
PluTI GGCGCC 2 cut(s) 590, 624
PpsI GAGTC 2 cut(s) 351, 353
Ppu21I YACGTR 1 cut(s) 571
PspN4I GGNNCC 3 cut(s) 588, 622, 811
PspPI GGNCC 2 cut(s) 147, 188
PsuI RGATCY 2 cut(s) 29, 401
PsyI GACNNNGTC 1 cut(s) 842
RsaI GTAC 3 cut(s) 368, 569, 641
RsaNI GTAC 3 cut(s) 367, 568, 640
SaqAI TTAA 4 cut(s) 177, 426, 486, 1054
SatI GCNGC 3 cut(s) 291, 777, 916
Sau3AI GATC 6 cut(s) 9, 29, 102, 322, 401, 973
Sau96I GGNCC 2 cut(s) 147, 188
SchI GAGTC 2 cut(s) 352, 353
ScrFI CCNGG 3 cut(s) 905, 943, 944
SduI GDGCHC 3 cut(s) 411, 648, 949
SfaNI GCATC 1 cut(s) 106
SfcI CTRYAG 1 cut(s) 919
SfoI GGCGCC 2 cut(s) 588, 622
SinI GGWCC 2 cut(s) 147, 188
SmaI CCCGGG 1 cut(s) 944
SmlI CTYRAG 2 cut(s) 652, 1022
SmoI CTYRAG 2 cut(s) 652, 1022
Sse9I AATT 7 cut(s) 131, 154, 627, 698, 929, 936, 1039
SsiI CCGC 2 cut(s) 595, 813
SspDI GGCGCC 2 cut(s) 586, 620
SspMI CTAG 3 cut(s) 192, 836, 1014
StyD4I CCNGG 3 cut(s) 903, 941, 942
StyI CCWWGG 1 cut(s) 107
TaaI ACNGT 4 cut(s) 25, 43, 567, 985
TaiI ACGT 2 cut(s) 573, 870
TaqI TCGA 3 cut(s) 411, 747, 909
TasI AATT 7 cut(s) 131, 154, 627, 698, 929, 936, 1039
TatI WGTACW 1 cut(s) 366
Tru1I TTAA 4 cut(s) 177, 426, 486, 1054
Tru9I TTAA 4 cut(s) 177, 426, 486, 1054
TseFI GTSAC 1 cut(s) 761
TseI GCWGC 3 cut(s) 290, 776, 915
Tsp45I GTSAC 1 cut(s) 761
TspDTI ATGAA 7 cut(s) 17, 214, 226, 231, 869, 909, 1032
TspMI CCCGGG 1 cut(s) 942
Tth111I GACNNNGTC 1 cut(s) 842
Van91I CCANNNNNTGG 1 cut(s) 442
VpaK11BI GGWCC 2 cut(s) 147, 188
XapI RAATTY 4 cut(s) 131, 698, 936, 1039
XcmI CCANNNNNNNNNTGG 1 cut(s) 597
XmaI CCCGGG 1 cut(s) 942
XmnI GAANNNNTTC 1 cut(s) 66
XspI CTAG 3 cut(s) 192, 836, 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.