pycom15g17010

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
11935734 .. 11936096
363 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g17010.1

Sequence Viewer

Length: 216 bp
ATGTTTCTCTTCTTTCTTTGGCACCTTGGCGAAATTCAGCAGCAACCCAGATTCTGTTCTGAACCCCAACGTAAGTGGCTGCTACCTCAAATAACTTCAGCATTTGGTGCAAGTAAGTCAGTTGTCGAGACAATTGATGAACTTAAAAAGCAGCAGCAGAGTTCAGATGCTACTGGTAACTTTGTCAATGCCATTTGTTTATTGATAATGAAATGA

Protein Analysis

72

Amino Acids

8.17

Weight (kDa)

7.81

Isoelectric Point (pI)

54.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022530)

Species Orthologous Gene IDs
pyrus_communis pycom02g04420 pycom02g04470 pycom15g17010
rosa_roxburghii Rroxscaffold_2G00148860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 21
AcsI RAATTY 1 cut(s) 33
AcuI CTGAAG 1 cut(s) 81
Alw26I GTCTC 1 cut(s) 122
AlwNI CAGNNNCTG 1 cut(s) 54
ApeKI GCWGC 4 cut(s) 40, 79, 151, 154
ApoI RAATTY 1 cut(s) 33
BanI GGYRCC 1 cut(s) 21
BbvI GCAGC 4 cut(s) 52, 66, 163, 166
BcoDI GTCTC 1 cut(s) 122
BisI GCNGC 4 cut(s) 41, 80, 152, 155
BlsI GCNGC 4 cut(s) 42, 81, 153, 156
BmiI GGNNCC 1 cut(s) 23
BmsI GCATC 1 cut(s) 157
BsaJI CCNNGG 1 cut(s) 25
Bse1I ACTGG 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 25
BseNI ACTGG 1 cut(s) 178
BseXI GCAGC 4 cut(s) 52, 66, 163, 166
BshNI GGYRCC 1 cut(s) 21
BsmAI GTCTC 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 23
BspT107I GGYRCC 1 cut(s) 21
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 1 cut(s) 25
BssT1I CCWWGG 1 cut(s) 25
Bst6I CTCTTC 1 cut(s) 14
BstAPI GCANNNNNTGC 1 cut(s) 107
BstMAI GTCTC 1 cut(s) 122
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstV1I GCAGC 4 cut(s) 52, 66, 163, 166
CaiI CAGNNNCTG 1 cut(s) 54
CspCI CAANNNNNGTGG 2 cut(s) 56, 91
CviJI RGCY 1 cut(s) 79
CviKI_1 RGCY 1 cut(s) 79
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 25
ErhI CCWWGG 1 cut(s) 25
Fnu4HI GCNGC 4 cut(s) 41, 80, 152, 155
Fsp4HI GCNGC 4 cut(s) 41, 80, 152, 155
GluI GCNGC 4 cut(s) 41, 80, 152, 155
HinfI GANTC 1 cut(s) 51
Hpy188I TCNGA 2 cut(s) 61, 166
Hpy188III TCNNGA 1 cut(s) 127
HpyCH4IV ACGT 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 110
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpySE526I ACGT 1 cut(s) 70
LpnPI CCDG 2 cut(s) 61, 159
Lsp1109I GCAGC 4 cut(s) 52, 66, 163, 166
LweI GCATC 1 cut(s) 157
MaeII ACGT 1 cut(s) 70
MaeIII GTNAC 1 cut(s) 176
MfeI CAATTG 1 cut(s) 132
MluCI AATT 2 cut(s) 33, 132
MnlI CCTC 1 cut(s) 96
MseI TTAA 1 cut(s) 144
MunI CAATTG 1 cut(s) 132
MwoI GCNNNNNNNGC 1 cut(s) 107
NlaIV GGNNCC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 51
PkrI GCNGC 4 cut(s) 42, 81, 153, 156
PspN4I GGNNCC 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 54
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 4 cut(s) 41, 80, 152, 155
SetI ASST 3 cut(s) 27, 73, 88
SfaNI GCATC 1 cut(s) 157
SgeI CNNG 5 cut(s) 38, 60, 123, 139, 186
Sse9I AATT 2 cut(s) 33, 132
StyI CCWWGG 1 cut(s) 25
TaiI ACGT 1 cut(s) 73
TaqI TCGA 1 cut(s) 126
TasI AATT 2 cut(s) 33, 132
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TseI GCWGC 4 cut(s) 40, 79, 151, 154
TspDTI ATGAA 1 cut(s) 153
XapI RAATTY 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.