Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0015834

Physical Location & Seq

Genomic Coordinates Forward (+)

19874541 .. 19876633

Gene Structure 2093 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCCGTCGATTCAGTGACATCCTCCCCCCTGGGCCCACCGGCCACCGAGAAGGACGCCAAGGCGCTTCAGTTCATAGAGGAGACGACCAAGAACACGGACTTGGTGCAGGAAAGGGTTCTGGGAGAGATTCTGAGTCGTAACGCTGAGACCGAGTACCTCAAACGATTCAGCCTCGACGGTGCGACCGACCGGAACTCGTTCAAGTCCAAAGTCCCGGTTGTTACGTACGAGGATCTTCAGCCGGAGATCCAACGTATTGCTAATGGTGACCGCTCTCCCATCTTGAGCTCTCACCCCATCTCTGAGTTTCTCACTAGTTCTGGGACTTCAGCTGGTGAACGAAAATTGATGCCTACAATCCATGAAGAGTTGGACCGTCGTACACTACTATACAGCTTGCTTCAGCCAGTGATGAATCTTTACGTGCCAGACCTTGACAAGGGAAAGGGGCTTTACTTCTTGTTCATCAAGGCGGAGACCAGGACGCCTGGAGGACTCGTAGCACGTCCGGTGCTGACAAGCTACTACAAGAGTGAGCACTTCAAGACCAGGCCAATTGACCCTTACAATGTCTTAACCAGCCCGAACGAGGCCATTCTCTGCCCCGACTCATTCCAAAGTATGTACACCCAAATGGTCTGCGGCCTCGTCATGCGCCAACAAGTCCTCCGAGTAGGCGCCGTGTTTGCCTCCGGCCTACTAAGAGCGATTCGGTTCCTCCAGCTCAACTGGCAACAACTAGCAATTGACATTTGCAATGGAACCCTGAACCCTAAAATCATAGACCCTTCTCTCCGTGAAACAATGTCCGGCATATTGAAACCGGACCCCGAGCTAGCAGATTTCATCACAAAGGAGTGTTGTGAGGAGAACTGGGAAGGCATAATCACAAGGGTTTGGCCTAACACAAAGTACCTCGACGTGATTGTCACCGGTGCAATGGCACAGTACATTCCTTTGCTTGAATACTACAGTAATGGCTTGCCGATGGCGTGTACTATGTACGCATCGTCCGAATGTTACTTCGGACTCAACCTCAAGCCAATGTGCAAACCGTCCGAGGTATCTTACACAATTATGCCGAACATGGCGTACTTCGAGTTCATCCCGCACGACCCTTCCGCTCCTCCGCTGTCCAGACACTCCCCTCCCCGCCTTGTCGACCTTGCTGATCTCGAAGTTGGGAAGGAGTACGAGCTCGTCATAACAACCTACGCCGGACTGTGTCGTTACCGGGTGGGAGATGTTCTCGAGGTCACCGGTTACCACAACGCCGCGCCGCAGTTTAGGTTTGTGAGGAGAAAGAACGTCTTGTTGAGCATCGACTCTGACAAGACGGATGAGGCTGAGCTGCAGAAGGCCATTGACAATGCCTCGGTGTTGTTGAGAGAGTTCAATACCACCGTAGTTGAGTACACAAGCTATGCGGACACAAAGACAATTCCGGGGCATTATGTGATTTACTGGGAATTGTTGGTGAAGGACCCGGCGAATAATTCCCCGAATCACGAGGTTCTGGACAAGTGTTGTTTAGCCATGGAAGAGTCGTTGAACTCGGTATACAGACAAGGCAGGGTGGCTGACAGCTCAATTGGACCACTTGAGATAAGGGTGGTAAAAAATGGCACATTTGAGGAGCTTATGGACTATGCAATCTCTAGAGGTGCGTCTATCAATCAGTACAAGGCACCAAGGTGTGTGAATTTCTCGCCCATCATGGAACTTCTTGACTCCAGGGTTGTTTCGGTGCACTTTAGCCTAAGTGCACCGCAGTGGACCCCAGAACAACGTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0010252 GO:0010279 GO:0016874 GO:0016879 GO:0016881 GO:0042221 GO:0042592 GO:0048878 GO:0050896 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

600

Amino Acids

67.42

Weight (kDa)

5.32

Isoelectric Point (pI)

43.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	23 - 331	4.2e-120	GH3 family N-terminal domain
GH3_M	PF23571	358 - 435	2.7e-29	GH3 family central domain
GH3_C	PF23572	451 - 570	1.2e-38	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59500 AT2G23170 AT4G37390
fragaria_vesca	FvH4_1g16980
malus_domestica	MD02G1180300.v1.1 MD15G1290900.v1.1
prunus_persica	Prupe.6G226100_v2.0.a1
pyrus_communis	pycom02g14600 pycom15g25440
rosa_laevigata	RLG00000017554
rosa_multiflora	Rmu_sc0002945.1_g000004
rosa_roxburghii	Rroxscaffold_2G00136610
rosa_rugosa	Rorug02G0140200
rosa_samantha	Rh2CG196000
rosa_wichuraiana	Rw2G015090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	929
AccB1I	GGYRCC	2 cut(s)	680, 1690
AccBSI	CCGCTC	2 cut(s)	276, 1127
AccI	GTMKAC	2 cut(s)	1164, 1563
AccII	CGCG	1 cut(s)	1280
AclWI	GGATC	2 cut(s)	243, 244
AcoI	YGGCCR	2 cut(s)	3, 42
AcsI	RAATTY	1 cut(s)	1705
AcuI	CTGAAG	4 cut(s)	53, 224, 315, 389
AcyI	GRCGYC	3 cut(s)	57, 488, 681
AfiI	CCNNNNNNNGG	2 cut(s)	442, 592
AgeI	ACCGGT	2 cut(s)	935, 1262
AgsI	TTSAA	6 cut(s)	205, 547, 823, 968, 1399, 1555
AhlI	ACTAGT	1 cut(s)	317
AjiI	CACGTC	2 cut(s)	509, 925
AjnI	CCWGG	5 cut(s)	30, 482, 490, 551, 1736
AjuI	GAANNNNNNNTTGG	2 cut(s)	86, 118
AleI	CACNNNNGTG	2 cut(s)	1696, 1774
Alw21I	GWGCWC	5 cut(s)	293, 543, 1203, 1755, 1771
Alw26I	GTCTC	3 cut(s)	77, 143, 473
Alw44I	GTGCAC	2 cut(s)	1751, 1767
AlwI	GGATC	2 cut(s)	243, 244
Ama87I	CYCGRG	2 cut(s)	833, 1253
AoxI	GGCC	9 cut(s)	3, 34, 42, 554, 594, 646, 697, 902, 1362
ApaI	GGGCCC	1 cut(s)	38
ApaLI	GTGCAC	2 cut(s)	1751, 1767
ApeKI	GCWGC	1 cut(s)	1354
ApoI	RAATTY	1 cut(s)	1705
AsiGI	ACCGGT	2 cut(s)	935, 1262
Asp700I	GAANNNNTTC	2 cut(s)	117, 200
AspLEI	GCGC	4 cut(s)	67, 660, 683, 1282
AspS9I	GGNCC	7 cut(s)	34, 35, 376, 829, 1486, 1598, 1779
AsuC2I	CCSGG	4 cut(s)	218, 1238, 1449, 1490
AsuHPI	GGTGA	6 cut(s)	281, 287, 350, 925, 1252, 1492
AsuNHI	GCTAGC	1 cut(s)	838
AvaI	CYCGRG	2 cut(s)	833, 1253
AvaII	GGWCC	5 cut(s)	376, 829, 1486, 1598, 1779
BaeGI	GKGCMC	3 cut(s)	38, 1755, 1771
BanI	GGYRCC	2 cut(s)	680, 1690
BanII	GRGCYC	3 cut(s)	38, 293, 1203
BauI	CACGAG	1 cut(s)	1511
Bbv12I	GWGCWC	5 cut(s)	293, 543, 1203, 1755, 1771
BbvI	GCAGC	1 cut(s)	1341
BccI	CCATC	4 cut(s)	290, 308, 985, 1724
BceAI	ACGGC	1 cut(s)	668
BciT130I	CCWGG	5 cut(s)	32, 484, 492, 553, 1738
BcnI	CCSGG	4 cut(s)	218, 1238, 1449, 1490
BcoDI	GTCTC	3 cut(s)	77, 143, 473
BcuI	ACTAGT	1 cut(s)	317
BfaI	CTAG	4 cut(s)	318, 743, 839, 1662
BfmI	CTRYAG	2 cut(s)	973, 1355
BfoI	RGCGCY	2 cut(s)	68, 684
BisI	GCNGC	4 cut(s)	646, 1278, 1283, 1355
BlpI	GCTNAGC	1 cut(s)	1350
BlsI	GCNGC	4 cut(s)	647, 1279, 1284, 1356
Bme1390I	CCNGG	9 cut(s)	32, 218, 484, 492, 553, 1238, 1449, 1490, 1738
Bme18I	GGWCC	5 cut(s)	376, 829, 1486, 1598, 1779
BmeT110I	CYCGRG	2 cut(s)	833, 1253
BmgBI	CACGTC	2 cut(s)	509, 925
BmgT120I	GGNCC	7 cut(s)	34, 35, 376, 829, 1486, 1598, 1779
BmiI	GGNNCC	8 cut(s)	36, 682, 719, 766, 831, 1488, 1692, 1781
BmrFI	CCNGG	9 cut(s)	32, 218, 484, 492, 553, 1238, 1449, 1490, 1738
BmrI	ACTGGG	2 cut(s)	886, 1477
BmsI	GCATC	3 cut(s)	342, 1019, 1332
BmtI	GCTAGC	1 cut(s)	842
BmuI	ACTGGG	2 cut(s)	886, 1477
BplI	GAGNNNNNCTC	2 cut(s)	1236, 1268
BpmI	CTGGAG	3 cut(s)	513, 707, 1720
Bpu1102I	GCTNAGC	1 cut(s)	1350
BpuEI	CTTGAG	3 cut(s)	307, 1025, 1625
BpuMI	CCSGG	4 cut(s)	218, 1238, 1449, 1490
BsaAI	YACGTR	2 cut(s)	228, 427
BsaHI	GRCGYC	3 cut(s)	57, 488, 681
BsaI	GGTCTC	2 cut(s)	143, 473
BsaJI	CCNNGG	9 cut(s)	30, 31, 60, 1062, 1377, 1448, 1539, 1694, 1737
BsaWI	WCCGGW	5 cut(s)	192, 511, 826, 935, 1262
BsaXI	ACNNNNNCTCC	4 cut(s)	486, 516, 654, 684
Bsc4I	CCNNNNNNNGG	2 cut(s)	442, 592
Bse118I	RCCGGY	3 cut(s)	40, 935, 1262
Bse1I	ACTGG	4 cut(s)	410, 737, 881, 1472
Bse3DI	GCAATG	2 cut(s)	766, 948
BseBI	CCWGG	5 cut(s)	32, 484, 492, 553, 1738
BseDI	CCNNGG	9 cut(s)	30, 31, 60, 1062, 1377, 1448, 1539, 1694, 1737
BseGI	GGATG	3 cut(s)	20, 1107, 1348
BseLI	CCNNNNNNNGG	2 cut(s)	442, 592
BseMI	GCAATG	2 cut(s)	766, 948
BseMII	CTCAG	4 cut(s)	125, 138, 297, 1341
BseNI	ACTGG	4 cut(s)	410, 737, 881, 1472
BseRI	GAGGAG	5 cut(s)	95, 884, 1119, 1315, 1652
BseSI	GKGCMC	3 cut(s)	38, 1755, 1771
BseXI	GCAGC	1 cut(s)	1341
BsgI	GTGCAG	1 cut(s)	128
Bsh1236I	CGCG	1 cut(s)	1280
Bsh1285I	CGRYCG	2 cut(s)	189, 193
BshFI	GGCC	9 cut(s)	5, 36, 44, 556, 596, 648, 699, 904, 1364
BshNI	GGYRCC	2 cut(s)	680, 1690
BshTI	ACCGGT	2 cut(s)	935, 1262
BsiEI	CGRYCG	2 cut(s)	189, 193
BsiHKAI	GWGCWC	5 cut(s)	293, 543, 1203, 1755, 1771
BsiHKCI	CYCGRG	2 cut(s)	833, 1253
BsiWI	CGTACG	1 cut(s)	228
BslFI	GGGAC	2 cut(s)	200, 340
BslI	CCNNNNNNNGG	2 cut(s)	442, 592
BsmAI	GTCTC	3 cut(s)	77, 143, 473
BsmBI	CGTCTC	1 cut(s)	77
BsmFI	GGGAC	2 cut(s)	200, 340
BsnI	GGCC	9 cut(s)	5, 36, 44, 556, 596, 648, 699, 904, 1364
Bso31I	GGTCTC	2 cut(s)	143, 473
BsoBI	CYCGRG	2 cut(s)	833, 1253
Bsp120I	GGGCCC	1 cut(s)	34
Bsp1286I	GDGCHC	6 cut(s)	38, 293, 543, 1203, 1755, 1771
Bsp1407I	TGTACA	1 cut(s)	627
Bsp143I	GATC	3 cut(s)	235, 249, 1174
Bsp1720I	GCTNAGC	1 cut(s)	1350
Bsp19I	CCATGG	1 cut(s)	1539
BspANI	GGCC	9 cut(s)	5, 36, 44, 556, 596, 648, 699, 904, 1364
BspCNI	CTCAG	4 cut(s)	126, 139, 298, 1342
BspFNI	CGCG	1 cut(s)	1280
BspLI	GGNNCC	8 cut(s)	36, 682, 719, 766, 831, 1488, 1692, 1781
BspMAI	CTGCAG	1 cut(s)	1359
BspOI	GCTAGC	1 cut(s)	842
BspPI	GGATC	2 cut(s)	243, 244
BspT107I	GGYRCC	2 cut(s)	680, 1690
BspTNI	GGTCTC	2 cut(s)	143, 473
BsrBI	CCGCTC	2 cut(s)	276, 1127
BsrDI	GCAATG	2 cut(s)	766, 948
BsrFI	RCCGGY	3 cut(s)	40, 935, 1262
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	4 cut(s)	410, 737, 881, 1472
BssAI	RCCGGY	3 cut(s)	40, 935, 1262
BssECI	CCNNGG	9 cut(s)	30, 31, 60, 1062, 1377, 1448, 1539, 1694, 1737
BssMI	GATC	3 cut(s)	235, 249, 1174
BssNAI	GTATAC	1 cut(s)	1564
BssNI	GRCGYC	3 cut(s)	57, 488, 681
BssSI	CACGAG	1 cut(s)	1511
BssT1I	CCWWGG	3 cut(s)	60, 1539, 1694
Bst1107I	GTATAC	1 cut(s)	1564
Bst2BI	CACGAG	1 cut(s)	1511
Bst2UI	CCWGG	5 cut(s)	32, 484, 492, 553, 1738
Bst4CI	ACNGT	7 cut(s)	182, 380, 951, 977, 1059, 1227, 1408
Bst6I	CTCTTC	2 cut(s)	363, 1539
BstACI	GRCGYC	3 cut(s)	57, 488, 681
BstAUI	TGTACA	1 cut(s)	627
BstBAI	YACGTR	2 cut(s)	228, 427
BstC8I	GCNNGC	3 cut(s)	401, 840, 986
BstDEI	CTNAG	6 cut(s)	134, 147, 306, 704, 1350, 1763
BstDSI	CCRYGG	1 cut(s)	1539
BstEII	GGTNACC	3 cut(s)	269, 1258, 1265
BstENI	CCTNNNNNAGG	1 cut(s)	440
BstF5I	GGATG	3 cut(s)	20, 1107, 1348
BstFNI	CGCG	1 cut(s)	1280
BstH2I	RGCGCY	2 cut(s)	68, 684
BstHHI	GCGC	4 cut(s)	67, 660, 683, 1282
BstKTI	GATC	3 cut(s)	238, 252, 1177
BstMAI	GTCTC	3 cut(s)	77, 143, 473
BstMBI	GATC	3 cut(s)	235, 249, 1174
BstMCI	CGRYCG	2 cut(s)	189, 193
BstMWI	GCNNNNNNNGC	2 cut(s)	689, 733
BstNI	CCWGG	5 cut(s)	32, 484, 492, 553, 1738
BstPI	GGTNACC	3 cut(s)	269, 1258, 1265
BstSCI	CCNGG	9 cut(s)	30, 216, 482, 490, 551, 1236, 1447, 1488, 1736
BstSFI	CTRYAG	2 cut(s)	973, 1355
BstSLI	GKGCMC	3 cut(s)	38, 1755, 1771
BstSNI	TACGTA	1 cut(s)	228
BstUI	CGCG	1 cut(s)	1280
BstV1I	GCAGC	1 cut(s)	1341
BstX2I	RGATCY	2 cut(s)	235, 249
BstYI	RGATCY	2 cut(s)	235, 249
BstZ17I	GTATAC	1 cut(s)	1564
BsuRI	GGCC	9 cut(s)	5, 36, 44, 556, 596, 648, 699, 904, 1364
BtgI	CCRYGG	1 cut(s)	1539
BtrI	CACGTC	2 cut(s)	509, 925
BtsCI	GGATG	3 cut(s)	20, 1107, 1348
BtsI	GCAGTG	1 cut(s)	1781
BtsIMutI	CAGTG	3 cut(s)	21, 417, 1781
Cac8I	GCNNGC	3 cut(s)	401, 840, 986
CfoI	GCGC	4 cut(s)	67, 660, 683, 1282
Cfr10I	RCCGGY	3 cut(s)	40, 935, 1262
Cfr13I	GGNCC	7 cut(s)	34, 35, 376, 829, 1486, 1598, 1779
CseI	GACGC	3 cut(s)	65, 496, 1659
CspAI	ACCGGT	2 cut(s)	935, 1262
CspCI	CAANNNNNGTGG	2 cut(s)	1393, 1428
CviAII	CATG	5 cut(s)	365, 655, 1090, 1540, 1720
DdeI	CTNAG	6 cut(s)	134, 147, 306, 704, 1350, 1763
DinI	GGCGCC	1 cut(s)	682
DpnI	GATC	3 cut(s)	237, 251, 1176
DpnII	GATC	3 cut(s)	235, 249, 1174
DrdI	GACNNNNNNGTC	1 cut(s)	929
DseDI	GACNNNNNNGTC	1 cut(s)	929
EaeI	YGGCCR	2 cut(s)	3, 42
Eam1104I	CTCTTC	2 cut(s)	363, 1539
EarI	CTCTTC	2 cut(s)	363, 1539
EciI	GGCGGA	1 cut(s)	491
Ecl136II	GAGCTC	2 cut(s)	291, 1201
Eco105I	TACGTA	1 cut(s)	228
Eco130I	CCWWGG	3 cut(s)	60, 1539, 1694
Eco24I	GRGCYC	3 cut(s)	38, 293, 1203
Eco31I	GGTCTC	2 cut(s)	143, 473
Eco47I	GGWCC	5 cut(s)	376, 829, 1486, 1598, 1779
Eco53kI	GAGCTC	2 cut(s)	291, 1201
Eco57I	CTGAAG	4 cut(s)	53, 224, 315, 389
Eco88I	CYCGRG	2 cut(s)	833, 1253
Eco91I	GGTNACC	3 cut(s)	269, 1258, 1265
EcoICRI	GAGCTC	2 cut(s)	291, 1201
EcoNI	CCTNNNNNAGG	1 cut(s)	440
EcoO109I	RGGNCCY	1 cut(s)	1486
EcoO65I	GGTNACC	3 cut(s)	269, 1258, 1265
EcoRII	CCWGG	5 cut(s)	30, 482, 490, 551, 1736
EcoT14I	CCWWGG	3 cut(s)	60, 1539, 1694
EcoT38I	GRGCYC	3 cut(s)	38, 293, 1203
EgeI	GGCGCC	1 cut(s)	682
EheI	GGCGCC	1 cut(s)	682
ErhI	CCWWGG	3 cut(s)	60, 1539, 1694
Esp3I	CGTCTC	1 cut(s)	77
FaeI	CATG	5 cut(s)	368, 658, 1093, 1543, 1723
FalI	AAGNNNNNCTT	2 cut(s)	1298, 1330
FaqI	GGGAC	2 cut(s)	200, 340
FatI	CATG	5 cut(s)	364, 654, 1089, 1539, 1719
FauI	CCCGC	2 cut(s)	1119, 1163
FblI	GTMKAC	2 cut(s)	1164, 1563
Fnu4HI	GCNGC	4 cut(s)	646, 1278, 1283, 1355
FokI	GGATG	3 cut(s)	7, 1094, 1355
FriOI	GRGCYC	3 cut(s)	38, 293, 1203
Fsp4HI	GCNGC	4 cut(s)	646, 1278, 1283, 1355
FspBI	CTAG	4 cut(s)	318, 743, 839, 1662
GlaI	GCGC	4 cut(s)	66, 659, 682, 1281
GluI	GCNGC	4 cut(s)	646, 1278, 1283, 1355
GsuI	CTGGAG	3 cut(s)	513, 707, 1720
HaeII	RGCGCY	2 cut(s)	68, 684
HaeIII	GGCC	9 cut(s)	5, 36, 44, 556, 596, 648, 699, 904, 1364
HgaI	GACGC	3 cut(s)	65, 496, 1659
HhaI	GCGC	4 cut(s)	67, 660, 683, 1282
Hin1I	GRCGYC	3 cut(s)	57, 488, 681
Hin1II	CATG	5 cut(s)	368, 658, 1093, 1543, 1723
Hin6I	GCGC	4 cut(s)	65, 658, 681, 1280
HinP1I	GCGC	4 cut(s)	65, 658, 681, 1280
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HphI	GGTGA	6 cut(s)	281, 287, 350, 925, 1252, 1492
Hpy188I	TCNGA	7 cut(s)	135, 307, 674, 1018, 1031, 1063, 1333
Hpy188III	TCNNGA	9 cut(s)	286, 547, 1140, 1178, 1253, 1511, 1520, 1662, 1730
Hpy99I	CGWCG	4 cut(s)	11, 182, 384, 926
HpyAV	CCTTC	7 cut(s)	46, 801, 875, 1131, 1183, 1354, 1477
HpyCH4III	ACNGT	7 cut(s)	182, 380, 951, 977, 1059, 1227, 1408
HpyCH4IV	ACGT	7 cut(s)	227, 256, 426, 508, 924, 1311, 1792
HpyCH4V	TGCA	8 cut(s)	109, 759, 941, 1053, 1357, 1655, 1753, 1769
HpyF10VI	GCNNNNNNNGC	2 cut(s)	689, 733
HpyF3I	CTNAG	6 cut(s)	134, 147, 306, 704, 1350, 1763
HpySE526I	ACGT	7 cut(s)	227, 256, 426, 508, 924, 1311, 1792
Hsp92I	GRCGYC	3 cut(s)	57, 488, 681
Hsp92II	CATG	5 cut(s)	368, 658, 1093, 1543, 1723
HspAI	GCGC	4 cut(s)	65, 658, 681, 1280
KasI	GGCGCC	1 cut(s)	680
Kzo9I	GATC	3 cut(s)	235, 249, 1174
LmnI	GCTCC	2 cut(s)	1132, 1639
Lsp1109I	GCAGC	1 cut(s)	1341
LweI	GCATC	3 cut(s)	342, 1019, 1332
MaeI	CTAG	4 cut(s)	318, 743, 839, 1662
MaeII	ACGT	7 cut(s)	227, 256, 426, 508, 924, 1311, 1792
MaeIII	GTNAC	9 cut(s)	16, 140, 223, 269, 931, 1022, 1232, 1258, 1265
MalI	GATC	3 cut(s)	237, 251, 1176
MbiI	CCGCTC	2 cut(s)	276, 1127
MboI	GATC	3 cut(s)	235, 249, 1174
MboII	GAAGA	3 cut(s)	230, 380, 1556
MfeI	CAATTG	3 cut(s)	558, 747, 1593
MflI	RGATCY	2 cut(s)	235, 249
MhlI	GDGCHC	6 cut(s)	38, 293, 543, 1203, 1755, 1771
MluCI	AATT	9 cut(s)	347, 558, 747, 1077, 1443, 1472, 1498, 1593, 1705
Mly113I	GGCGCC	1 cut(s)	681
MlyI	GAGTC	7 cut(s)	145, 492, 605, 1026, 1322, 1556, 1727
MmeI	TCCRAC	2 cut(s)	277, 354
MroXI	GAANNNNTTC	2 cut(s)	117, 200
MseI	TTAA	2 cut(s)	578, 1798
MslI	CAYNNNNRTG	4 cut(s)	635, 1079, 1696, 1774
MspA1I	CMGCKG	2 cut(s)	335, 1135
MspR9I	CCNGG	9 cut(s)	32, 218, 484, 492, 553, 1238, 1449, 1490, 1738
MunI	CAATTG	3 cut(s)	558, 747, 1593
MvaI	CCWGG	5 cut(s)	32, 484, 492, 553, 1738
MvnI	CGCG	1 cut(s)	1280
MwoI	GCNNNNNNNGC	2 cut(s)	689, 733
NarI	GGCGCC	1 cut(s)	681
NciI	CCSGG	4 cut(s)	218, 1238, 1449, 1490
NcoI	CCATGG	1 cut(s)	1539
NdeII	GATC	3 cut(s)	235, 249, 1174
NheI	GCTAGC	1 cut(s)	838
NlaIII	CATG	5 cut(s)	368, 658, 1093, 1543, 1723
NlaIV	GGNNCC	8 cut(s)	36, 682, 719, 766, 831, 1488, 1692, 1781
NmuCI	GTSAC	4 cut(s)	16, 269, 931, 1258
OliI	CACNNNNGTG	2 cut(s)	1696, 1774
PaeR7I	CTCGAG	1 cut(s)	1253
PasI	CCCWGGG	1 cut(s)	31
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 186, 1014
PdmI	GAANNNNTTC	2 cut(s)	117, 200
PfeI	GAWTC	6 cut(s)	11, 130, 168, 418, 712, 1507
Pfl23II	CGTACG	1 cut(s)	228
PflFI	GACNNNGTC	1 cut(s)	1227
PinAI	ACCGGT	2 cut(s)	935, 1262
PkrI	GCNGC	4 cut(s)	647, 1279, 1284, 1356
PleI	GAGTC	7 cut(s)	144, 492, 605, 1026, 1322, 1555, 1727
PluTI	GGCGCC	1 cut(s)	684
PpsI	GAGTC	7 cut(s)	144, 492, 605, 1026, 1322, 1555, 1727
Ppu21I	YACGTR	2 cut(s)	228, 427
PpuMI	RGGWCCY	1 cut(s)	1486
Psp124BI	GAGCTC	2 cut(s)	293, 1203
Psp5II	RGGWCCY	1 cut(s)	1486
Psp6I	CCWGG	5 cut(s)	30, 482, 490, 551, 1736
PspEI	GGTNACC	3 cut(s)	269, 1258, 1265
PspGI	CCWGG	5 cut(s)	30, 482, 490, 551, 1736
PspLI	CGTACG	1 cut(s)	228
PspN4I	GGNNCC	8 cut(s)	36, 682, 719, 766, 831, 1488, 1692, 1781
PspOMI	GGGCCC	1 cut(s)	34
PspPI	GGNCC	7 cut(s)	34, 35, 376, 829, 1486, 1598, 1779
PspPPI	RGGWCCY	1 cut(s)	1486
PsrI	GAACNNNNNNTAC	6 cut(s)	1079, 1088, 1111, 1120, 1547, 1579
PstI	CTGCAG	1 cut(s)	1359
PsuI	RGATCY	2 cut(s)	235, 249
PsyI	GACNNNGTC	1 cut(s)	1227
PvuII	CAGCTG	1 cut(s)	335
RseI	CAYNNNNRTG	4 cut(s)	635, 1079, 1696, 1774
SacI	GAGCTC	2 cut(s)	293, 1203
SalI	GTCGAC	1 cut(s)	1163
SaqAI	TTAA	2 cut(s)	578, 1798
SatI	GCNGC	4 cut(s)	646, 1278, 1283, 1355
Sau3AI	GATC	3 cut(s)	235, 249, 1174
Sau96I	GGNCC	7 cut(s)	34, 35, 376, 829, 1486, 1598, 1779
SchI	GAGTC	7 cut(s)	145, 492, 605, 1026, 1322, 1556, 1727
ScrFI	CCNGG	9 cut(s)	32, 218, 484, 492, 553, 1238, 1449, 1490, 1738
SduI	GDGCHC	6 cut(s)	38, 293, 543, 1203, 1755, 1771
SfaNI	GCATC	3 cut(s)	342, 1019, 1332
SfcI	CTRYAG	2 cut(s)	973, 1355
SfoI	GGCGCC	1 cut(s)	682
Sfr274I	CTCGAG	1 cut(s)	1253
SgrAI	CRCCGGYG	1 cut(s)	935
SinI	GGWCC	5 cut(s)	376, 829, 1486, 1598, 1779
SlaI	CTCGAG	1 cut(s)	1253
SmiMI	CAYNNNNRTG	4 cut(s)	635, 1079, 1696, 1774
SmlI	CTYRAG	4 cut(s)	286, 1040, 1253, 1604
SmoI	CTYRAG	4 cut(s)	286, 1040, 1253, 1604
SnaBI	TACGTA	1 cut(s)	228
SpeI	ACTAGT	1 cut(s)	317
Sse9I	AATT	9 cut(s)	347, 558, 747, 1077, 1443, 1472, 1498, 1593, 1705
SspDI	GGCGCC	1 cut(s)	680
SspMI	CTAG	4 cut(s)	318, 743, 839, 1662
SstI	GAGCTC	2 cut(s)	293, 1203
StyD4I	CCNGG	9 cut(s)	30, 216, 482, 490, 551, 1236, 1447, 1488, 1736
StyI	CCWWGG	3 cut(s)	60, 1539, 1694
TaaI	ACNGT	7 cut(s)	182, 380, 951, 977, 1059, 1227, 1408
TaiI	ACGT	7 cut(s)	230, 259, 429, 511, 927, 1314, 1795
TaqI	TCGA	8 cut(s)	9, 177, 921, 1101, 1164, 1179, 1254, 1326
TaqII	GACCGA	2 cut(s)	167, 203
TasI	AATT	9 cut(s)	347, 558, 747, 1077, 1443, 1472, 1498, 1593, 1705
TatI	WGTACW	5 cut(s)	627, 951, 998, 1416, 1683
TauI	GCSGC	3 cut(s)	648, 1280, 1285
TfiI	GAWTC	6 cut(s)	11, 130, 168, 418, 712, 1507
Tru1I	TTAA	2 cut(s)	578, 1798
Tru9I	TTAA	2 cut(s)	578, 1798
TscAI	CASTG	3 cut(s)	21, 417, 1781
TseFI	GTSAC	4 cut(s)	16, 269, 931, 1258
TseI	GCWGC	1 cut(s)	1354
Tsp45I	GTSAC	4 cut(s)	16, 269, 931, 1258
TspDTI	ATGAA	6 cut(s)	64, 381, 431, 457, 838, 1096
TspGWI	ACGGA	3 cut(s)	113, 788, 1355
TspRI	CASTG	3 cut(s)	21, 417, 1781
Tth111I	GACNNNGTC	1 cut(s)	1227
VneI	GTGCAC	2 cut(s)	1751, 1767
VpaK11BI	GGWCC	5 cut(s)	376, 829, 1486, 1598, 1779
XagI	CCTNNNNNAGG	1 cut(s)	440
XapI	RAATTY	1 cut(s)	1705
XbaI	TCTAGA	1 cut(s)	1661
XhoI	CTCGAG	1 cut(s)	1253
XmiI	GTMKAC	2 cut(s)	1164, 1563
XmnI	GAANNNNTTC	2 cut(s)	117, 200
XspI	CTAG	4 cut(s)	318, 743, 839, 1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.