pycom15g30590

Protein KRTCAP2 homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
28388691 .. 28390473
1783 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g30590.2

Sequence Viewer

Length: 345 bp
ATGCTGTATTCCATCCTTCTGTTTACTGTGATTCTATCACTTCAACAGATGTACAGAGGGAAGTTAGCATCAACGGAGTTGTTTACCATTCTTGGGGGTTTCATTAGTTCTCTCCTATTTCTTGCGCTGCTCACCTTCATTGGCAATTTCCAAGAAACAAGTGGTGTAAGGACTGGCTGGGGTGCGGTCATTATAGCAGAAGTAATTGCTCTTATTGCTGCTGGCACTGTGCATCGAGTTTGCATCACAACATGTTTCTTGTTTTCCGCCTGCTTACTCTATGAGGTCAACAAGCTTTCAGGGATAATGCTAACCAAAAGTGAATCTAAAACGAAAAGGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

12.55

Weight (kDa)

9.18

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014183)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 185, 267
AfaI GTAC 2 cut(s) 53, 341
AfiI CCNNNNNNNGG 1 cut(s) 93
AflIII ACRYGT 1 cut(s) 251
AgsI TTSAA 1 cut(s) 44
AluBI AGCT 1 cut(s) 295
AluI AGCT 1 cut(s) 295
ApeKI GCWGC 2 cut(s) 127, 218
AspLEI GCGC 1 cut(s) 127
AsuHPI GGTGA 1 cut(s) 124
BbvI GCAGC 2 cut(s) 114, 205
BccI CCATC 1 cut(s) 20
BisI GCNGC 2 cut(s) 128, 219
BlsI GCNGC 2 cut(s) 129, 220
BmsI GCATC 3 cut(s) 77, 241, 252
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse1I ACTGG 1 cut(s) 178
BseGI GGATG 1 cut(s) 12
BseLI CCNNNNNNNGG 1 cut(s) 93
BseNI ACTGG 1 cut(s) 178
BseXI GCAGC 2 cut(s) 114, 205
BseYI CCCAGC 1 cut(s) 177
BslI CCNNNNNNNGG 1 cut(s) 93
Bsp1407I TGTACA 1 cut(s) 51
BspACI CCGC 2 cut(s) 185, 267
BsrGI TGTACA 1 cut(s) 51
BsrI ACTGG 1 cut(s) 178
Bst4CI ACNGT 2 cut(s) 28, 229
BstAUI TGTACA 1 cut(s) 51
BstC8I GCNNGC 2 cut(s) 223, 271
BstF5I GGATG 1 cut(s) 12
BstHHI GCGC 1 cut(s) 127
BstMWI GCNNNNNNNGC 1 cut(s) 215
BstNSI RCATGY 1 cut(s) 255
BstV1I GCAGC 2 cut(s) 114, 205
BtsCI GGATG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 225
Cac8I GCNNGC 2 cut(s) 223, 271
CfoI GCGC 1 cut(s) 127
Csp6I GTAC 2 cut(s) 52, 340
CviAII CATG 1 cut(s) 252
CviJI RGCY 2 cut(s) 177, 295
CviKI_1 RGCY 2 cut(s) 177, 295
CviQI GTAC 2 cut(s) 52, 340
EciI GGCGGA 1 cut(s) 256
FaeI CATG 1 cut(s) 255
FaiI YATR 3 cut(s) 194, 253, 282
FatI CATG 1 cut(s) 251
Fnu4HI GCNGC 2 cut(s) 128, 219
Fsp4HI GCNGC 2 cut(s) 128, 219
GlaI GCGC 1 cut(s) 126
GluI GCNGC 2 cut(s) 128, 219
GsaI CCCAGC 1 cut(s) 181
HhaI GCGC 1 cut(s) 127
Hin1II CATG 1 cut(s) 255
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 1 cut(s) 289
HindII GTYRAC 1 cut(s) 289
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 2 cut(s) 31, 323
HphI GGTGA 1 cut(s) 124
Hpy166II GTNNAC 3 cut(s) 24, 84, 289
Hpy8I GTNNAC 3 cut(s) 24, 84, 289
HpyAV CCTTC 2 cut(s) 26, 145
HpyCH4III ACNGT 2 cut(s) 28, 229
HpyCH4V TGCA 2 cut(s) 232, 243
HpyF10VI GCNNNNNNNGC 1 cut(s) 215
Hsp92II CATG 1 cut(s) 255
HspAI GCGC 1 cut(s) 125
LpnPI CCDG 5 cut(s) 159, 163, 207, 283, 285
Lsp1109I GCAGC 2 cut(s) 114, 205
LweI GCATC 3 cut(s) 77, 241, 252
MluCI AATT 2 cut(s) 145, 204
MnlI CCTC 2 cut(s) 50, 277
MwoI GCNNNNNNNGC 1 cut(s) 215
NlaIII CATG 1 cut(s) 255
NspI RCATGY 1 cut(s) 255
PciI ACATGT 1 cut(s) 251
PfeI GAWTC 2 cut(s) 31, 323
PkrI GCNGC 2 cut(s) 129, 220
PscI ACATGT 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 177
RsaI GTAC 2 cut(s) 53, 341
RsaNI GTAC 2 cut(s) 52, 340
SatI GCNGC 2 cut(s) 128, 219
SetI ASST 4 cut(s) 137, 288, 297, 341
SfaNI GCATC 3 cut(s) 77, 241, 252
Sse9I AATT 2 cut(s) 145, 204
SsiI CCGC 2 cut(s) 185, 267
TaaI ACNGT 2 cut(s) 28, 229
TaqI TCGA 1 cut(s) 235
TasI AATT 2 cut(s) 145, 204
TatI WGTACW 1 cut(s) 51
TfiI GAWTC 2 cut(s) 31, 323
TscAI CASTG 1 cut(s) 232
TseI GCWGC 2 cut(s) 127, 218
TspDTI ATGAA 2 cut(s) 91, 127
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 1 cut(s) 232
XceI RCATGY 1 cut(s) 255
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.