pycom15g38610

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
38382138 .. 38383011
874 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38610.4

Sequence Viewer

Length: 273 bp
ATGTATTCGAGTTTGCTGAATTCTTTGACGGTCATCTGTTTGTTAATGAGAAGGGTGGTCAATTTAAAGTTATTGTTGAGTATGCTCCATCACAACGTGTTCCAGAACATTGGTCTAAGAAGGATGGTCGTGAAGGAACCATATTCAGAGATCCCGAGTATCTGGAGTTTCTTGAATTTATTGCAAAGCCTGCTGAGAATCTTCCAAGTGCAGAGTTACAATTGGAGAGAAGAGAAGCAGAACGATCTGGTGCTGGAAAGGATGCTCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

91

Amino Acids

10.79

Weight (kDa)

9.74

Isoelectric Point (pI)

64.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 145
AcsI RAATTY 2 cut(s) 19, 175
AdeI CACNNNGTG 1 cut(s) 97
AflIII ACRYGT 1 cut(s) 96
AgsI TTSAA 1 cut(s) 175
AlwI GGATC 1 cut(s) 145
Ama87I CYCGRG 1 cut(s) 154
ApoI RAATTY 2 cut(s) 19, 175
AvaI CYCGRG 1 cut(s) 154
BccI CCATC 2 cut(s) 96, 118
BfmI CTRYAG 1 cut(s) 269
BmeT110I CYCGRG 1 cut(s) 154
BmiI GGNNCC 1 cut(s) 138
BmsI GCATC 1 cut(s) 252
BpmI CTGGAG 1 cut(s) 184
BseGI GGATG 2 cut(s) 129, 267
BseMII CTCAG 1 cut(s) 185
BsgI GTGCAG 1 cut(s) 230
BsiHKCI CYCGRG 1 cut(s) 154
BsoBI CYCGRG 1 cut(s) 154
Bsp143I GATC 2 cut(s) 150, 244
BspCNI CTCAG 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 138
BspPI GGATC 1 cut(s) 145
BssMI GATC 2 cut(s) 150, 244
Bst4CI ACNGT 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 225
BstAPI GCANNNNNTGC 1 cut(s) 190
BstC8I GCNNGC 1 cut(s) 191
BstDEI CTNAG 2 cut(s) 116, 194
BstF5I GGATG 2 cut(s) 129, 267
BstKTI GATC 2 cut(s) 153, 247
BstMBI GATC 2 cut(s) 150, 244
BstMWI GCNNNNNNNGC 1 cut(s) 190
BstSFI CTRYAG 1 cut(s) 269
BstX2I RGATCY 1 cut(s) 150
BstXI CCANNNNNNTGG 1 cut(s) 110
BstYI RGATCY 1 cut(s) 150
BtsCI GGATG 2 cut(s) 129, 267
Cac8I GCNNGC 1 cut(s) 191
CviJI RGCY 1 cut(s) 189
CviKI_1 RGCY 1 cut(s) 189
DdeI CTNAG 2 cut(s) 116, 194
DpnI GATC 2 cut(s) 152, 246
DpnII GATC 2 cut(s) 150, 244
DraI TTTAAA 1 cut(s) 66
DraIII CACNNNGTG 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Eco88I CYCGRG 1 cut(s) 154
EcoRI GAATTC 1 cut(s) 19
FaiI YATR 3 cut(s) 83, 142, 271
FokI GGATG 1 cut(s) 136
GsuI CTGGAG 1 cut(s) 184
HinfI GANTC 1 cut(s) 198
Hpy188I TCNGA 1 cut(s) 148
Hpy188III TCNNGA 5 cut(s) 103, 130, 154, 163, 172
HpyAV CCTTC 3 cut(s) 45, 114, 127
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4IV ACGT 1 cut(s) 96
HpyCH4V TGCA 2 cut(s) 184, 211
HpyF10VI GCNNNNNNNGC 1 cut(s) 190
HpyF3I CTNAG 2 cut(s) 116, 194
HpySE526I ACGT 1 cut(s) 96
Kzo9I GATC 2 cut(s) 150, 244
LmnI GCTCC 2 cut(s) 90, 270
LpnPI CCDG 5 cut(s) 116, 148, 203, 233, 239
LweI GCATC 1 cut(s) 252
MaeII ACGT 1 cut(s) 96
MaeIII GTNAC 1 cut(s) 215
MalI GATC 2 cut(s) 152, 246
MboI GATC 2 cut(s) 150, 244
MboII GAAGA 2 cut(s) 193, 242
MfeI CAATTG 1 cut(s) 220
MflI RGATCY 1 cut(s) 150
MluCI AATT 4 cut(s) 19, 61, 175, 220
MseI TTAA 2 cut(s) 44, 65
MunI CAATTG 1 cut(s) 220
MwoI GCNNNNNNNGC 1 cut(s) 190
NdeII GATC 2 cut(s) 150, 244
NlaIV GGNNCC 1 cut(s) 138
PfeI GAWTC 1 cut(s) 198
PspN4I GGNNCC 1 cut(s) 138
PsuI RGATCY 1 cut(s) 150
SaqAI TTAA 2 cut(s) 44, 65
Sau3AI GATC 2 cut(s) 150, 244
SetI ASST 1 cut(s) 99
SfaNI GCATC 1 cut(s) 252
SfcI CTRYAG 1 cut(s) 269
Sse9I AATT 4 cut(s) 19, 61, 175, 220
TaaI ACNGT 1 cut(s) 31
TaiI ACGT 1 cut(s) 99
TaqI TCGA 1 cut(s) 8
TasI AATT 4 cut(s) 19, 61, 175, 220
TfiI GAWTC 1 cut(s) 198
Tru1I TTAA 2 cut(s) 44, 65
Tru9I TTAA 2 cut(s) 44, 65
XapI RAATTY 2 cut(s) 19, 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.