pycom16g13310

acetate butyrate--CoA ligase AAE7

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
9460875 .. 9462728
1854 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g13310.1

Sequence Viewer

Length: 1431 bp
ATGGCAGGAGCTGTGTTAAACACTGTAAATGTTCGTCTAAATGCAGTGACTATTGCTTTCCTTCTTGGTCATTCATCGTCTGTTGTTGTGATGGTGGATCAAGAATTTTTTCCCTTGGCAGAGGAAGCTTTGAAAATATGGGCAGAGAAAAGCGAAGGCAGTTACAAGCCTCCACTCTTAGTTGTCATAGCTGATGAAAGCTGTGATCCTGTGGCACTAAAAAGTGCTTTGGGAAGAGGCGCCATTGAATACGAGACATTCTTGGAAAGTGGTGACCCTGAGTTTGCTTGGAAACCACCAGAGGATGAGTGGCAGAGCATTGCTCTGGGTTATACTTCTGGCACAACAGCCAGCCCTAAGGGGGTGGTTTTGCATCACCGTGGGGCTTATCTGATGGCTTTGAGTGGTCCTCTTGTATGGGGGATGACTGAAGGAGCTGTATACCTGTGGACTCTACCCATGTTCCATTGCAATGGTTGGTGTTTCACTTGGTCGCTTGCAGCTCTTTGTGGGACAAACATATGCCTTCGACAGATTACAGCAAAGGCAGTATATTCAGCGATAGCCGAGCATGGCGTGACTCACTTTTGTGCTGCACCCGTGGTACTCAACACTTTGGTTAATGCTTCCCCGGAGGAGACTATCCTTCCTCTCCCACATGTTGTACAGGTGATGACAGCTGGTGCTGCCCCTCCACCTTCTATTCTCTTTGCAATGTCCCAAAAGGGCTTCCGAGTCACGCACACTTATGGTCTGTCAGAAACTTATGGCCCCTCCACAGTATGTGCGTGGAAGCCTGAGTGGGACTCGCTGCCCCCTGTAAAACAAGCACGGCTTAATGCACGCCAAGGTGTTCGGTACATTGGCATGGAGGGCGTAGATGTTTTCAACCCTGAGACTATGCAACCAGTTCCAGCTGATGGAGCTACCATGGGGGAGATAATGATGCGGGGAAATCTCGTAATGAAGGGGTATTTAAAGAACCCAAAGGTGAATAATGAAGTTTTCGCCAATGGTTGGTTTCATTCTGGTGATCTGGCAGTGAAGCATCCAGATAACTATATCGAAATCAAAGACAGATCAAAGGACATTATCATCTCCGGAGGTGAGAACATCAGTAGTGTGGAGGTAGAGAACACTCTATATCAACACCCAGCCATATTCGAGGTATCGGTGGTTGCAAGGCCACATGAGAAGTGGGGTGAAACTCCTTGCGCTTTTGTGACATTGAAACCGGGTGTCGATAAGTCTGATGAGAATCGTATGGCAGAAGATATAATGAAGTTCTGCCGGTCCAAGCTACCTGCGTACTGTGTTCCGAGATCCGTGGTATTTGGACCATTGCCAAAGACCGCTACCGGGAAGATACAGAAGCATTTGCTGAGGGCCAAGGCCAAAGAGCTGGGACCTGTCTCTATGAGTAAGTTATAA

Protein Analysis

477

Amino Acids

51.94

Weight (kDa)

6.25

Isoelectric Point (pI)

32.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 1 - 326 6e-50 AMP-binding enzyme
AMP-binding_C PF13193 376 - 455 7.7e-21 AMP-binding enzyme C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013183)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1429
Acc36I ACCTGC 1 cut(s) 1312
AccB1I GGYRCC 1 cut(s) 239
AccB7I CCANNNNNTGG 2 cut(s) 920, 1017
AccI GTMKAC 1 cut(s) 441
AccIII TCCGGA 1 cut(s) 1100
AciI CCGC 2 cut(s) 949, 1353
AclWI GGATC 3 cut(s) 105, 200, 1317
AcsI RAATTY 1 cut(s) 104
AcuI CTGAAG 1 cut(s) 450
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 4 cut(s) 606, 666, 860, 1310
AfiI CCNNNNNNNGG 4 cut(s) 361, 920, 1017, 1359
AflIII ACRYGT 1 cut(s) 658
AgsI TTSAA 4 cut(s) 133, 248, 889, 1231
AleI CACNNNNGTG 1 cut(s) 588
Alw26I GTCTC 4 cut(s) 248, 632, 890, 1417
AlwI GGATC 3 cut(s) 105, 200, 1317
AlwNI CAGNNNCTG 1 cut(s) 11
Aor13HI TCCGGA 1 cut(s) 1100
AoxI GGCC 4 cut(s) 769, 1184, 1386, 1392
ApeKI GCWGC 4 cut(s) 500, 593, 686, 811
ApoI RAATTY 1 cut(s) 104
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
Asp700I GAANNNNTTC 1 cut(s) 108
AspLEI GCGC 2 cut(s) 242, 1217
AspS9I GGNCC 6 cut(s) 407, 770, 1293, 1337, 1386, 1406
AsuC2I CCSGG 3 cut(s) 632, 1236, 1360
AsuHPI GGTGA 7 cut(s) 284, 368, 682, 1003, 1043, 1118, 1214
AvaII GGWCC 4 cut(s) 407, 1293, 1337, 1406
AxyI CCTNAGG 1 cut(s) 357
BanI GGYRCC 1 cut(s) 239
BbvCI CCTCAGC 1 cut(s) 1382
BbvI GCAGC 4 cut(s) 512, 580, 673, 798
BccI CCATC 3 cut(s) 85, 388, 914
BceAI ACGGC 1 cut(s) 848
BcnI CCSGG 3 cut(s) 632, 1236, 1360
BcoDI GTCTC 4 cut(s) 248, 632, 890, 1417
BfoI RGCGCY 1 cut(s) 243
BfuAI ACCTGC 1 cut(s) 1312
BisI GCNGC 4 cut(s) 501, 594, 687, 812
BlsI GCNGC 4 cut(s) 502, 595, 688, 813
Bme1390I CCNGG 3 cut(s) 632, 1236, 1360
Bme18I GGWCC 4 cut(s) 407, 1293, 1337, 1406
BmgT120I GGNCC 6 cut(s) 407, 770, 1293, 1337, 1386, 1406
BmiI GGNNCC 3 cut(s) 241, 772, 1407
BmrFI CCNGG 3 cut(s) 632, 1236, 1360
BmsI GCATC 3 cut(s) 382, 936, 1057
BplI GAGNNNNNCTC 6 cut(s) 307, 339, 394, 426, 791, 823
Bpu10I CCTNAGC 1 cut(s) 1382
BpuMI CCSGG 3 cut(s) 632, 1236, 1360
BsaBI GATNNNNATC 1 cut(s) 1257
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 8 cut(s) 114, 379, 600, 630, 847, 930, 1326, 1389
BsaWI WCCGGW 1 cut(s) 1100
Bsc4I CCNNNNNNNGG 4 cut(s) 361, 920, 1017, 1359
Bse118I RCCGGY 1 cut(s) 1290
Bse1I ACTGG 1 cut(s) 908
Bse21I CCTNAGG 1 cut(s) 357
Bse3DI GCAATG 5 cut(s) 318, 466, 478, 720, 1340
Bse8I GATNNNNATC 1 cut(s) 1257
BseAI TCCGGA 1 cut(s) 1100
BseDI CCNNGG 8 cut(s) 114, 379, 600, 630, 847, 930, 1326, 1389
BseGI GGATG 3 cut(s) 310, 429, 1048
BseJI GATNNNNATC 1 cut(s) 1257
BseLI CCNNNNNNNGG 4 cut(s) 361, 920, 1017, 1359
BseMI GCAATG 5 cut(s) 318, 466, 478, 720, 1340
BseMII CTCAG 4 cut(s) 270, 789, 885, 1373
BseNI ACTGG 1 cut(s) 908
BseRI GAGGAG 1 cut(s) 650
BseXI GCAGC 4 cut(s) 512, 580, 673, 798
BseYI CCCAGC 2 cut(s) 1153, 1402
BsgI GTGCAG 1 cut(s) 579
BshFI GGCC 4 cut(s) 771, 1186, 1388, 1394
BshNI GGYRCC 1 cut(s) 239
BsiSI CCGG 5 cut(s) 632, 1101, 1235, 1291, 1359
BslFI GGGAC 4 cut(s) 526, 703, 818, 1419
BslI CCNNNNNNNGG 4 cut(s) 361, 920, 1017, 1359
BsmAI GTCTC 4 cut(s) 248, 632, 890, 1417
BsmFI GGGAC 4 cut(s) 526, 703, 818, 1419
BsnI GGCC 4 cut(s) 771, 1186, 1388, 1394
Bsp13I TCCGGA 1 cut(s) 1100
Bsp1407I TGTACA 1 cut(s) 664
Bsp143I GATC 5 cut(s) 97, 205, 1033, 1079, 1322
Bsp19I CCATGG 1 cut(s) 930
BspACI CCGC 2 cut(s) 949, 1353
BspANI GGCC 4 cut(s) 771, 1186, 1388, 1394
BspCNI CTCAG 4 cut(s) 271, 790, 886, 1374
BspEI TCCGGA 1 cut(s) 1100
BspLI GGNNCC 3 cut(s) 241, 772, 1407
BspMI ACCTGC 1 cut(s) 1312
BspPI GGATC 3 cut(s) 105, 200, 1317
BspT107I GGYRCC 1 cut(s) 239
BsrDI GCAATG 5 cut(s) 318, 466, 478, 720, 1340
BsrFI RCCGGY 1 cut(s) 1290
BsrGI TGTACA 1 cut(s) 664
BsrI ACTGG 1 cut(s) 908
BssAI RCCGGY 1 cut(s) 1290
BssECI CCNNGG 8 cut(s) 114, 379, 600, 630, 847, 930, 1326, 1389
BssMI GATC 5 cut(s) 97, 205, 1033, 1079, 1322
BssNAI GTATAC 1 cut(s) 442
BssNI GRCGYC 1 cut(s) 240
BssT1I CCWWGG 4 cut(s) 114, 847, 930, 1389
Bst1107I GTATAC 1 cut(s) 442
Bst4CI ACNGT 4 cut(s) 25, 380, 781, 1313
Bst6I CTCTTC 1 cut(s) 229
BstACI GRCGYC 1 cut(s) 240
BstAUI TGTACA 1 cut(s) 664
BstC8I GCNNGC 3 cut(s) 352, 498, 844
BstDEI CTNAG 6 cut(s) 178, 279, 357, 798, 894, 1382
BstDSI CCRYGG 4 cut(s) 379, 600, 930, 1326
BstEII GGTNACC 1 cut(s) 272
BstF5I GGATG 3 cut(s) 310, 429, 1048
BstH2I RGCGCY 1 cut(s) 243
BstHHI GCGC 2 cut(s) 242, 1217
BstKTI GATC 5 cut(s) 100, 208, 1036, 1082, 1325
BstMAI GTCTC 4 cut(s) 248, 632, 890, 1417
BstMBI GATC 5 cut(s) 97, 205, 1033, 1079, 1322
BstMWI GCNNNNNNNGC 4 cut(s) 125, 686, 873, 923
BstNSI RCATGY 1 cut(s) 662
BstPI GGTNACC 1 cut(s) 272
BstSCI CCNGG 3 cut(s) 630, 1234, 1358
BstV1I GCAGC 4 cut(s) 512, 580, 673, 798
BstX2I RGATCY 1 cut(s) 1322
BstXI CCANNNNNNTGG 2 cut(s) 473, 1402
BstYI RGATCY 1 cut(s) 1322
BstZ17I GTATAC 1 cut(s) 442
Bsu36I CCTNAGG 1 cut(s) 357
BsuRI GGCC 4 cut(s) 771, 1186, 1388, 1394
BtgI CCRYGG 4 cut(s) 379, 600, 930, 1326
BtsCI GGATG 3 cut(s) 310, 429, 1048
BtsI GCAGTG 2 cut(s) 51, 1047
BtsIMutI CAGTG 3 cut(s) 21, 51, 1047
BveI ACCTGC 1 cut(s) 1312
Cac8I GCNNGC 3 cut(s) 352, 498, 844
CaiI CAGNNNCTG 1 cut(s) 11
CfoI GCGC 2 cut(s) 242, 1217
Cfr10I RCCGGY 1 cut(s) 1290
Cfr13I GGNCC 6 cut(s) 407, 770, 1293, 1337, 1386, 1406
Csp6I GTAC 4 cut(s) 605, 665, 859, 1309
CviAII CATG 6 cut(s) 460, 572, 659, 868, 931, 1190
CviQI GTAC 4 cut(s) 605, 665, 859, 1309
DdeI CTNAG 6 cut(s) 178, 279, 357, 798, 894, 1382
DinI GGCGCC 1 cut(s) 241
DpnI GATC 5 cut(s) 99, 207, 1035, 1081, 1324
DpnII GATC 5 cut(s) 97, 205, 1033, 1079, 1322
DraI TTTAAA 1 cut(s) 978
Eam1104I CTCTTC 1 cut(s) 229
EarI CTCTTC 1 cut(s) 229
Eco130I CCWWGG 4 cut(s) 114, 847, 930, 1389
Eco47I GGWCC 4 cut(s) 407, 1293, 1337, 1406
Eco57I CTGAAG 1 cut(s) 450
Eco81I CCTNAGG 1 cut(s) 357
Eco91I GGTNACC 1 cut(s) 272
EcoO109I RGGNCCY 1 cut(s) 1406
EcoO65I GGTNACC 1 cut(s) 272
EcoT14I CCWWGG 4 cut(s) 114, 847, 930, 1389
EgeI GGCGCC 1 cut(s) 241
EheI GGCGCC 1 cut(s) 241
ErhI CCWWGG 4 cut(s) 114, 847, 930, 1389
FaeI CATG 6 cut(s) 463, 575, 662, 871, 934, 1193
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FaqI GGGAC 4 cut(s) 526, 703, 818, 1419
FatI CATG 6 cut(s) 459, 571, 658, 867, 930, 1189
FauI CCCGC 1 cut(s) 942
FauNDI CATATG 1 cut(s) 521
FblI GTMKAC 1 cut(s) 441
Fnu4HI GCNGC 4 cut(s) 501, 594, 687, 812
FokI GGATG 3 cut(s) 317, 436, 1035
Fsp4HI GCNGC 4 cut(s) 501, 594, 687, 812
GlaI GCGC 2 cut(s) 241, 1216
GluI GCNGC 4 cut(s) 501, 594, 687, 812
GsaI CCCAGC 2 cut(s) 1157, 1406
HaeII RGCGCY 1 cut(s) 243
HaeIII GGCC 4 cut(s) 771, 1186, 1388, 1394
HapII CCGG 5 cut(s) 632, 1101, 1235, 1291, 1359
HhaI GCGC 2 cut(s) 242, 1217
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 6 cut(s) 463, 575, 662, 871, 934, 1193
Hin6I GCGC 2 cut(s) 240, 1215
HinP1I GCGC 2 cut(s) 240, 1215
HindIII AAGCTT 1 cut(s) 126
HinfI GANTC 5 cut(s) 451, 580, 735, 806, 1258
HpaII CCGG 5 cut(s) 632, 1101, 1235, 1291, 1359
HphI GGTGA 7 cut(s) 284, 368, 682, 1003, 1043, 1118, 1214
Hpy166II GTNNAC 2 cut(s) 442, 450
Hpy188I TCNGA 5 cut(s) 393, 734, 760, 1252, 1320
Hpy188III TCNNGA 3 cut(s) 101, 1052, 1101
Hpy8I GTNNAC 2 cut(s) 442, 450
HpyAV CCTTC 7 cut(s) 71, 149, 425, 536, 656, 708, 961
HpyCH4III ACNGT 4 cut(s) 25, 380, 781, 1313
HpyCH4V TGCA 9 cut(s) 44, 373, 471, 500, 596, 713, 842, 904, 1181
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 686, 873, 923
HpyF3I CTNAG 6 cut(s) 178, 279, 357, 798, 894, 1382
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 6 cut(s) 463, 575, 662, 871, 934, 1193
HspAI GCGC 2 cut(s) 240, 1215
KasI GGCGCC 1 cut(s) 239
Kpn2I TCCGGA 1 cut(s) 1100
Kzo9I GATC 5 cut(s) 97, 205, 1033, 1079, 1322
LmnI GCTCC 3 cut(s) 8, 434, 923
Lsp1109I GCAGC 4 cut(s) 512, 580, 673, 798
LweI GCATC 3 cut(s) 382, 936, 1057
MaeIII GTNAC 6 cut(s) 46, 161, 272, 577, 736, 1222
MalI GATC 5 cut(s) 99, 207, 1035, 1081, 1324
MboI GATC 5 cut(s) 97, 205, 1033, 1079, 1322
MboII GAAGA 3 cut(s) 246, 1283, 1375
MflI RGATCY 1 cut(s) 1322
MluCI AATT 1 cut(s) 104
Mly113I GGCGCC 1 cut(s) 240
MlyI GAGTC 4 cut(s) 445, 574, 744, 800
MroI TCCGGA 1 cut(s) 1100
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 4 cut(s) 17, 621, 837, 977
MslI CAYNNNNRTG 6 cut(s) 378, 471, 588, 747, 866, 1029
MspA1I CMGCKG 2 cut(s) 680, 917
MspI CCGG 5 cut(s) 632, 1101, 1235, 1291, 1359
MspR9I CCNGG 3 cut(s) 632, 1236, 1360
MwoI GCNNNNNNNGC 4 cut(s) 125, 686, 873, 923
NarI GGCGCC 1 cut(s) 240
NciI CCSGG 3 cut(s) 632, 1236, 1360
NcoI CCATGG 1 cut(s) 930
NdeI CATATG 1 cut(s) 521
NdeII GATC 5 cut(s) 97, 205, 1033, 1079, 1322
NlaIII CATG 6 cut(s) 463, 575, 662, 871, 934, 1193
NlaIV GGNNCC 3 cut(s) 241, 772, 1407
NmeAIII GCCGAG 1 cut(s) 592
NmuCI GTSAC 5 cut(s) 46, 272, 577, 736, 1222
NspI RCATGY 1 cut(s) 662
OliI CACNNNNGTG 1 cut(s) 588
PciI ACATGT 1 cut(s) 658
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 1 cut(s) 1258
PflMI CCANNNNNTGG 2 cut(s) 920, 1017
PkrI GCNGC 4 cut(s) 502, 595, 688, 813
PleI GAGTC 4 cut(s) 445, 574, 743, 800
PluTI GGCGCC 1 cut(s) 243
PpsI GAGTC 4 cut(s) 445, 574, 743, 800
PpuMI RGGWCCY 1 cut(s) 1406
PscI ACATGT 1 cut(s) 658
PsiI TTATAA 1 cut(s) 1429
Psp5II RGGWCCY 1 cut(s) 1406
PspEI GGTNACC 1 cut(s) 272
PspFI CCCAGC 2 cut(s) 1153, 1402
PspN4I GGNNCC 3 cut(s) 241, 772, 1407
PspPI GGNCC 6 cut(s) 407, 770, 1293, 1337, 1386, 1406
PspPPI RGGWCCY 1 cut(s) 1406
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 1 cut(s) 1322
PvuII CAGCTG 2 cut(s) 680, 917
RsaI GTAC 4 cut(s) 606, 666, 860, 1310
RsaNI GTAC 4 cut(s) 605, 665, 859, 1309
RseI CAYNNNNRTG 6 cut(s) 378, 471, 588, 747, 866, 1029
SaqAI TTAA 4 cut(s) 17, 621, 837, 977
SatI GCNGC 4 cut(s) 501, 594, 687, 812
Sau3AI GATC 5 cut(s) 97, 205, 1033, 1079, 1322
Sau96I GGNCC 6 cut(s) 407, 770, 1293, 1337, 1386, 1406
SchI GAGTC 4 cut(s) 445, 574, 744, 800
ScrFI CCNGG 3 cut(s) 632, 1236, 1360
SfaNI GCATC 3 cut(s) 382, 936, 1057
SfoI GGCGCC 1 cut(s) 241
SinI GGWCC 4 cut(s) 407, 1293, 1337, 1406
SmiMI CAYNNNNRTG 6 cut(s) 378, 471, 588, 747, 866, 1029
Sse9I AATT 1 cut(s) 104
SsiI CCGC 2 cut(s) 949, 1353
SspDI GGCGCC 1 cut(s) 239
StyD4I CCNGG 3 cut(s) 630, 1234, 1358
StyI CCWWGG 4 cut(s) 114, 847, 930, 1389
TaaI ACNGT 4 cut(s) 25, 380, 781, 1313
TaqI TCGA 4 cut(s) 529, 1065, 1164, 1242
TasI AATT 1 cut(s) 104
TatI WGTACW 1 cut(s) 664
TfiI GAWTC 1 cut(s) 1258
Tru1I TTAA 4 cut(s) 17, 621, 837, 977
Tru9I TTAA 4 cut(s) 17, 621, 837, 977
TscAI CASTG 3 cut(s) 28, 51, 1047
TseFI GTSAC 5 cut(s) 46, 272, 577, 736, 1222
TseI GCWGC 4 cut(s) 500, 593, 686, 811
Tsp45I GTSAC 5 cut(s) 46, 272, 577, 736, 1222
TspDTI ATGAA 6 cut(s) 63, 210, 980, 1013, 1014, 1295
TspGWI ACGGA 1 cut(s) 1315
TspRI CASTG 3 cut(s) 28, 51, 1047
Van91I CCANNNNNTGG 2 cut(s) 920, 1017
VpaK11BI GGWCC 4 cut(s) 407, 1293, 1337, 1406
XapI RAATTY 1 cut(s) 104
XceI RCATGY 1 cut(s) 662
XcmI CCANNNNNNNNNTGG 2 cut(s) 306, 1194
XmiI GTMKAC 1 cut(s) 441
XmnI GAANNNNTTC 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.