Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0013183

Physical Location & Seq

Genomic Coordinates Reverse (-)

56810853 .. 56814654

Gene Structure 3802 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG253300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGTGGTGGAGCGAGACATCGACGATCTGCCGAAGAACGAGGCGAACCACACGGCATTAACGCCGCTGTGGTTTCTGGAGAGAGCAGCTGTGGTGCACCCCACCAGGAAATCGCTGGTCCATGGATCTCGTCACTACACGTGGCTCCAGACTTACCAGCGCTGCCGTCGTGTGGCCTCCGCCCTCAACAACCACTCCGTCGGCCTCGGTTCCACGGTATCAATAATTGCACCAAATGTTCCAGCCCTTTATGAAGCACATTTTGGAATTCCAATGGCAGGAGCTGTGTTAAACACTGTCAATGTCCGTCTAAATGCATCGACCATTGCTTTCCTTCTTGGTCATTCATCATCTGTAGTTGTGATGGTGGATCAAGAAATTTTCACCTTAGCCGAGGAGGCTTTGAAGATTTGGGCAGAGAAAAGCAAAGGCCAATACAAGCCTCCACTCTTAATTGTCATAGGTGATGAAAGCTTGGATCCTAAGGGACTCAAATATGCTCTGGGAAGAGGCGCCATTGAATATGAGAAATTCTTGGAAACTGGTGACCCTGAGTATGCCTGGCAACCACCAAAGGATGAGTGGCAGAGTATTGCTTTGGGTTATACTTCCGGAACAACAGCCAGCCCTAAGGGGGTGGTGTTGCACCATCGTGGGGCTTATTTGATGTCTTTAAGTGGTGGTCTTGTCTGGGGGATGAATGAAGGAGCTGTATATCTTTGGACTCTACCCATGTTCCATTGCAATGGTTGGTGTTACACTTGGGCACTTGCAGCTTTTTGTGGGACAAACATATGCCTTCGACAGGTTACAGCCAAGACAGTCTATTCAGCAATACACAAGTATGCTGTGACTCACTTTTGTGCTGCACCCGTGGTGCTCAACACCATTGTCAATGCTCCAGAAGACGATACCATCCTTCCTCTCCCTCATGTTGTACACGTAATGACAGCTGGTGCTGCTCCTCCACCTTCTGTTCTCTTTGCAATGTCCCAAAGGGGGTTCAAAGTCACCCACACTTATGGTCTATCCGAAACTTATGGCCCCGCCACAGTATGTGCATGGAAGCCTGAGTGGGACTCCCTTCCCCCTGAAACCCAAGCTCGATTAAATGCGCGTCAAGGTGTTCGGTACATTGGTTTGGAGAGAGCAGATGTTCTGAACCCTCGCACTATGGAACCTGTTCCTGCAGATGGAAAAACTGTGGGAGAGATAATGATGCGGGGAAATCTTGTAATGAAGGGTTACTTAAAGAACCCGAAGGAAAATGAGGAAACTTTTGCAAACGGGTGGTTTCATTCTGGTGATCTTGCCGTGAAACATCCAGATTCATACATAGAAATCAAAGACAGATCAAAGGACATTATCATATCAGGAGGTGAGAATATCAGTAGTGTGGAGGTAGAGAACATTCTATATCAACACCCAGCCATATTGGAGGTATCAGTGGTTGCAAGGCCAGATGAGAAGTGGGGAGAGTCTCCTTGTGCTTTTGTGACATTGAAGCAAAGCGTTAATAAGTCCGATGAAAAGCGTGTGGCAGAAGATATAATGAAGTTCTGCCGGGAAAAGATGCCGGCTTATTGGGTTCCCAAATCTGTCTTGTTCGGACCATTACCAAAGACAGCTACTGGGAAGATACAGAAGCATTTGCTGAGGACAAAAGCCAAAGAGTTGGGACCTGTCAAGAGGGTGAGCAAGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003987 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005975 GO:0006081 GO:0006082 GO:0006083 GO:0006097 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009987 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0016999 GO:0017144 GO:0019605 GO:0019752 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046459 GO:0046487 GO:0047760 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

568

Amino Acids

62.83

Weight (kDa)

8.39

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	26 - 417	8.8e-70	AMP-binding enzyme
AMP-binding_C	PF13193	467 - 546	8e-21	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16910
fragaria_vesca	FvH4_4g19360 FvH4_4g19360
malus_domestica	MD13G1157200.v1.1 MD16G1158200.v1.1
prunus_persica	Prupe.1G123000_v2.0.a1
pyrus_communis	pycom13g13470 pycom16g13310
rosa_chinensis	RchiOBHm_Chr4g0424391
rosa_laevigata	RLG00000007478
rosa_multiflora	Rmu_sc0005995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366340
rosa_rugosa	Rorug04G0197300
rosa_samantha	Rh4AG253300 Rh4BG258700 Rh4CG270000 Rh4DG253200
rosa_wichuraiana	Rw4G021860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1705
AccB1I	GGYRCC	1 cut(s)	512
AccII	CGCG	1 cut(s)	1117
AccIII	TCCGGA	1 cut(s)	611
AciI	CCGC	4 cut(s)	65, 180, 1047, 1222
AclWI	GGATC	4 cut(s)	133, 378, 473, 486
AcsI	RAATTY	3 cut(s)	267, 378, 530
AcvI	CACGTG	1 cut(s)	141
AcyI	GRCGYC	1 cut(s)	513
AfaI	GTAC	2 cut(s)	939, 1133
AfeI	AGCGCT	1 cut(s)	161
AfiI	CCNNNNNNNGG	7 cut(s)	172, 278, 634, 655, 805, 999, 1193
AflIII	ACRYGT	2 cut(s)	138, 940
AgsI	TTSAA	4 cut(s)	406, 521, 1006, 1504
AjnI	CCWGG	2 cut(s)	104, 560
AjuI	GAANNNNNNNTTGG	2 cut(s)	246, 278
AleI	CACNNNNGTG	2 cut(s)	651, 861
AluBI	AGCT	8 cut(s)	89, 284, 474, 710, 776, 953, 1103, 1628
AluI	AGCT	8 cut(s)	89, 284, 474, 710, 776, 953, 1103, 1628
Alw21I	GWGCWC	2 cut(s)	99, 882
Alw26I	GTCTC	2 cut(s)	9, 1485
Alw44I	GTGCAC	1 cut(s)	95
AlwI	GGATC	4 cut(s)	133, 378, 473, 486
AlwNI	CAGNNNCTG	2 cut(s)	284, 1631
Aor13HI	TCCGGA	1 cut(s)	611
Aor51HI	AGCGCT	1 cut(s)	161
AoxI	GGCC	5 cut(s)	174, 202, 430, 1042, 1457
ApaLI	GTGCAC	1 cut(s)	95
ApeKI	GCWGC	5 cut(s)	86, 162, 773, 866, 959
ApoI	RAATTY	3 cut(s)	267, 378, 530
Asp700I	GAANNNNTTC	1 cut(s)	1182
AspLEI	GCGC	3 cut(s)	162, 515, 1117
AspS9I	GGNCC	4 cut(s)	118, 1043, 1610, 1679
AsuC2I	CCSGG	1 cut(s)	1565
AsuHPI	GGTGA	7 cut(s)	376, 476, 557, 1003, 1316, 1391, 1705
AvaII	GGWCC	3 cut(s)	118, 1610, 1679
AxyI	CCTNAGG	2 cut(s)	483, 630
BaeGI	GKGCMC	2 cut(s)	99, 769
BaeI	ACNNNNGTAYC	2 cut(s)	1123, 1156
BamHI	GGATCC	1 cut(s)	478
BanI	GGYRCC	1 cut(s)	512
BbrPI	CACGTG	1 cut(s)	141
BbsI	GAAGAC	1 cut(s)	912
Bbv12I	GWGCWC	2 cut(s)	99, 882
BbvCI	CCTCAGC	1 cut(s)	1655
BbvI	GCAGC	5 cut(s)	98, 149, 785, 853, 946
BccI	CCATC	4 cut(s)	358, 657, 923, 1187
BceAI	ACGGC	3 cut(s)	69, 150, 1298
BciT130I	CCWGG	2 cut(s)	106, 562
BcnI	CCSGG	1 cut(s)	1565
BcoDI	GTCTC	2 cut(s)	9, 1485
BfmI	CTRYAG	2 cut(s)	354, 1188
BfoI	RGCGCY	2 cut(s)	163, 516
BglI	GCCNNNNNGGC	1 cut(s)	398
BisI	GCNGC	6 cut(s)	65, 87, 163, 774, 867, 960
BlsI	GCNGC	6 cut(s)	66, 88, 164, 775, 868, 961
Bme1390I	CCNGG	3 cut(s)	106, 562, 1565
Bme18I	GGWCC	3 cut(s)	118, 1610, 1679
BmgT120I	GGNCC	4 cut(s)	118, 1043, 1610, 1679
BmiI	GGNNCC	8 cut(s)	146, 211, 480, 514, 1045, 1179, 1590, 1680
BmrFI	CCNGG	3 cut(s)	106, 562, 1565
BmrI	ACTGGG	1 cut(s)	1641
BmsI	GCATC	3 cut(s)	326, 1209, 1563
BmuI	ACTGGG	1 cut(s)	1641
BpiI	GAAGAC	1 cut(s)	912
BplI	GAGNNNNNCTC	2 cut(s)	1064, 1096
BpmI	CTGGAG	3 cut(s)	98, 131, 885
Bpu10I	CCTNAGC	2 cut(s)	388, 1655
BpuMI	CCSGG	1 cut(s)	1565
BsaAI	YACGTR	2 cut(s)	141, 943
BsaHI	GRCGYC	1 cut(s)	513
BsaJI	CCNNGG	5 cut(s)	121, 205, 213, 393, 873
BsaWI	WCCGGW	1 cut(s)	611
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	7 cut(s)	172, 278, 634, 655, 805, 999, 1193
Bse118I	RCCGGY	1 cut(s)	1576
Bse1I	ACTGG	2 cut(s)	547, 1636
Bse21I	CCTNAGG	2 cut(s)	483, 630
Bse3DI	GCAATG	4 cut(s)	324, 739, 751, 993
BseAI	TCCGGA	1 cut(s)	611
BseBI	CCWGG	2 cut(s)	106, 562
BseDI	CCNNGG	5 cut(s)	121, 205, 213, 393, 873
BseGI	GGATG	4 cut(s)	583, 702, 915, 1321
BseLI	CCNNNNNNNGG	7 cut(s)	172, 278, 634, 655, 805, 999, 1193
BseMI	GCAATG	4 cut(s)	324, 739, 751, 993
BseMII	CTCAG	3 cut(s)	543, 1062, 1646
BseNI	ACTGG	2 cut(s)	547, 1636
BseRI	GAGGAG	2 cut(s)	410, 954
BseSI	GKGCMC	2 cut(s)	99, 769
BseXI	GCAGC	5 cut(s)	98, 149, 785, 853, 946
BseYI	CCCAGC	1 cut(s)	1426
BsgI	GTGCAG	1 cut(s)	852
Bsh1236I	CGCG	1 cut(s)	1117
BshFI	GGCC	5 cut(s)	176, 204, 432, 1044, 1459
BshNI	GGYRCC	1 cut(s)	512
BsiHKAI	GWGCWC	2 cut(s)	99, 882
BsiSI	CCGG	3 cut(s)	612, 1564, 1577
BslFI	GGGAC	5 cut(s)	501, 799, 976, 1091, 1692
BslI	CCNNNNNNNGG	7 cut(s)	172, 278, 634, 655, 805, 999, 1193
BsmAI	GTCTC	2 cut(s)	9, 1485
BsmFI	GGGAC	5 cut(s)	501, 799, 976, 1091, 1692
BsnI	GGCC	5 cut(s)	176, 204, 432, 1044, 1459
Bsp1286I	GDGCHC	3 cut(s)	99, 769, 882
Bsp13I	TCCGGA	1 cut(s)	611
Bsp1407I	TGTACA	1 cut(s)	937
Bsp143I	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
Bsp19I	CCATGG	1 cut(s)	121
BspACI	CCGC	4 cut(s)	65, 180, 1047, 1222
BspANI	GGCC	5 cut(s)	176, 204, 432, 1044, 1459
BspCNI	CTCAG	3 cut(s)	544, 1063, 1647
BspEI	TCCGGA	1 cut(s)	611
BspFNI	CGCG	1 cut(s)	1117
BspLI	GGNNCC	8 cut(s)	146, 211, 480, 514, 1045, 1179, 1590, 1680
BspMAI	CTGCAG	1 cut(s)	1192
BspPI	GGATC	4 cut(s)	133, 378, 473, 486
BspT107I	GGYRCC	1 cut(s)	512
BsrDI	GCAATG	4 cut(s)	324, 739, 751, 993
BsrFI	RCCGGY	1 cut(s)	1576
BsrGI	TGTACA	1 cut(s)	937
BsrI	ACTGG	2 cut(s)	547, 1636
BssAI	RCCGGY	1 cut(s)	1576
BssECI	CCNNGG	5 cut(s)	121, 205, 213, 393, 873
BssMI	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
BssNI	GRCGYC	1 cut(s)	513
BssT1I	CCWWGG	1 cut(s)	121
Bst2UI	CCWGG	2 cut(s)	106, 562
Bst4CI	ACNGT	5 cut(s)	217, 298, 823, 1054, 1204
Bst6I	CTCTTC	1 cut(s)	502
BstACI	GRCGYC	1 cut(s)	513
BstAUI	TGTACA	1 cut(s)	937
BstBAI	YACGTR	2 cut(s)	141, 943
BstC8I	GCNNGC	2 cut(s)	625, 1578
BstDEI	CTNAG	6 cut(s)	388, 483, 552, 630, 1071, 1655
BstDSI	CCRYGG	3 cut(s)	121, 213, 873
BstEII	GGTNACC	1 cut(s)	545
BstENI	CCTNNNNNAGG	1 cut(s)	803
BstF5I	GGATG	4 cut(s)	583, 702, 915, 1321
BstFNI	CGCG	1 cut(s)	1117
BstH2I	RGCGCY	2 cut(s)	163, 516
BstHHI	GCGC	3 cut(s)	162, 515, 1117
BstKTI	GATC	6 cut(s)	28, 128, 373, 481, 1309, 1355
BstMAI	GTCTC	2 cut(s)	9, 1485
BstMBI	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
BstMWI	GCNNNNNNNGC	3 cut(s)	398, 773, 959
BstNI	CCWGG	2 cut(s)	106, 562
BstPI	GGTNACC	1 cut(s)	545
BstSCI	CCNGG	3 cut(s)	104, 560, 1563
BstSFI	CTRYAG	2 cut(s)	354, 1188
BstSLI	GKGCMC	2 cut(s)	99, 769
BstUI	CGCG	1 cut(s)	1117
BstV1I	GCAGC	5 cut(s)	98, 149, 785, 853, 946
BstV2I	GAAGAC	1 cut(s)	912
BstX2I	RGATCY	2 cut(s)	125, 478
BstXI	CCANNNNNNTGG	3 cut(s)	746, 1022, 1675
BstYI	RGATCY	2 cut(s)	125, 478
Bsu36I	CCTNAGG	2 cut(s)	483, 630
BsuRI	GGCC	5 cut(s)	176, 204, 432, 1044, 1459
BtgI	CCRYGG	3 cut(s)	121, 213, 873
BtsCI	GGATG	4 cut(s)	583, 702, 915, 1321
BtsIMutI	CAGTG	2 cut(s)	294, 1452
Cac8I	GCNNGC	2 cut(s)	625, 1578
CaiI	CAGNNNCTG	2 cut(s)	284, 1631
CfoI	GCGC	3 cut(s)	162, 515, 1117
Cfr10I	RCCGGY	1 cut(s)	1576
Cfr13I	GGNCC	4 cut(s)	118, 1043, 1610, 1679
CseI	GACGC	1 cut(s)	1106
Csp6I	GTAC	2 cut(s)	938, 1132
CviAII	CATG	4 cut(s)	122, 733, 932, 1062
CviQI	GTAC	2 cut(s)	938, 1132
DdeI	CTNAG	6 cut(s)	388, 483, 552, 630, 1071, 1655
DinI	GGCGCC	1 cut(s)	514
DpnI	GATC	6 cut(s)	27, 127, 372, 480, 1308, 1354
DpnII	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
Eam1104I	CTCTTC	1 cut(s)	502
EarI	CTCTTC	1 cut(s)	502
EciI	GGCGGA	1 cut(s)	169
Eco130I	CCWWGG	1 cut(s)	121
Eco47I	GGWCC	3 cut(s)	118, 1610, 1679
Eco47III	AGCGCT	1 cut(s)	161
Eco72I	CACGTG	1 cut(s)	141
Eco81I	CCTNAGG	2 cut(s)	483, 630
Eco91I	GGTNACC	1 cut(s)	545
EcoNI	CCTNNNNNAGG	1 cut(s)	803
EcoO109I	RGGNCCY	1 cut(s)	1679
EcoO65I	GGTNACC	1 cut(s)	545
EcoRI	GAATTC	1 cut(s)	267
EcoRII	CCWGG	2 cut(s)	104, 560
EcoT14I	CCWWGG	1 cut(s)	121
EcoT22I	ATGCAT	1 cut(s)	319
EgeI	GGCGCC	1 cut(s)	514
EheI	GGCGCC	1 cut(s)	514
ErhI	CCWWGG	1 cut(s)	121
FaeI	CATG	4 cut(s)	125, 736, 935, 1065
FalI	AAGNNNNNCTT	2 cut(s)	1232, 1264
FaqI	GGGAC	5 cut(s)	501, 799, 976, 1091, 1692
FatI	CATG	4 cut(s)	121, 732, 931, 1061
FauI	CCCGC	2 cut(s)	1054, 1215
FauNDI	CATATG	1 cut(s)	794
Fnu4HI	GCNGC	6 cut(s)	65, 87, 163, 774, 867, 960
FokI	GGATG	4 cut(s)	590, 709, 902, 1308
Fsp4HI	GCNGC	6 cut(s)	65, 87, 163, 774, 867, 960
GlaI	GCGC	3 cut(s)	161, 514, 1116
GluI	GCNGC	6 cut(s)	65, 87, 163, 774, 867, 960
GsaI	CCCAGC	1 cut(s)	1430
GsuI	CTGGAG	3 cut(s)	98, 131, 885
HaeII	RGCGCY	2 cut(s)	163, 516
HaeIII	GGCC	5 cut(s)	176, 204, 432, 1044, 1459
HapII	CCGG	3 cut(s)	612, 1564, 1577
HgaI	GACGC	1 cut(s)	1106
HhaI	GCGC	3 cut(s)	162, 515, 1117
Hin1I	GRCGYC	1 cut(s)	513
Hin1II	CATG	4 cut(s)	125, 736, 935, 1065
Hin6I	GCGC	3 cut(s)	160, 513, 1115
HinP1I	GCGC	3 cut(s)	160, 513, 1115
HindIII	AAGCTT	1 cut(s)	472
HinfI	GANTC	6 cut(s)	489, 724, 853, 1079, 1328, 1478
HpaII	CCGG	3 cut(s)	612, 1564, 1577
HphI	GGTGA	7 cut(s)	376, 476, 557, 1003, 1316, 1391, 1705
Hpy166II	GTNNAC	2 cut(s)	97, 940
Hpy188I	TCNGA	4 cut(s)	1033, 1161, 1525, 1610
Hpy188III	TCNNGA	8 cut(s)	77, 148, 374, 612, 902, 1325, 1374, 1687
Hpy8I	GTNNAC	2 cut(s)	97, 940
Hpy99I	CGWCG	3 cut(s)	26, 171, 203
HpyAV	CCTTC	8 cut(s)	344, 698, 809, 929, 981, 1094, 1234, 1255
HpyCH4III	ACNGT	5 cut(s)	217, 298, 823, 1054, 1204
HpyCH4IV	ACGT	2 cut(s)	140, 942
HpyF10VI	GCNNNNNNNGC	3 cut(s)	398, 773, 959
HpyF3I	CTNAG	6 cut(s)	388, 483, 552, 630, 1071, 1655
HpySE526I	ACGT	2 cut(s)	140, 942
Hsp92I	GRCGYC	1 cut(s)	513
Hsp92II	CATG	4 cut(s)	125, 736, 935, 1065
HspAI	GCGC	3 cut(s)	160, 513, 1115
KasI	GGCGCC	1 cut(s)	512
Kpn2I	TCCGGA	1 cut(s)	611
KroI	GCCGGC	1 cut(s)	1576
KroNI	GCCGGC	1 cut(s)	1578
Kzo9I	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
LmnI	GCTCC	6 cut(s)	10, 150, 281, 707, 904, 967
Lsp1109I	GCAGC	5 cut(s)	98, 149, 785, 853, 946
LweI	GCATC	3 cut(s)	326, 1209, 1563
MaeII	ACGT	2 cut(s)	140, 942
MaeIII	GTNAC	8 cut(s)	131, 545, 755, 808, 850, 1009, 1244, 1495
MalI	GATC	6 cut(s)	27, 127, 372, 480, 1308, 1354
MboI	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
MboII	GAAGA	6 cut(s)	46, 418, 519, 917, 1556, 1648
MflI	RGATCY	2 cut(s)	125, 478
MhlI	GDGCHC	3 cut(s)	99, 769, 882
MluCI	AATT	5 cut(s)	225, 267, 378, 453, 530
Mly113I	GGCGCC	1 cut(s)	513
MlyI	GAGTC	5 cut(s)	483, 718, 847, 1073, 1487
Mph1103I	ATGCAT	1 cut(s)	319
MroI	TCCGGA	1 cut(s)	611
MroNI	GCCGGC	1 cut(s)	1576
MroXI	GAANNNNTTC	1 cut(s)	1182
MseI	TTAA	7 cut(s)	59, 290, 452, 674, 1109, 1250, 1515
MslI	CAYNNNNRTG	6 cut(s)	651, 744, 843, 861, 1020, 1302
MspA1I	CMGCKG	3 cut(s)	67, 89, 953
MspI	CCGG	3 cut(s)	612, 1564, 1577
MspR9I	CCNGG	3 cut(s)	106, 562, 1565
MvaI	CCWGG	2 cut(s)	106, 562
MvnI	CGCG	1 cut(s)	1117
MwoI	GCNNNNNNNGC	3 cut(s)	398, 773, 959
NaeI	GCCGGC	1 cut(s)	1578
NarI	GGCGCC	1 cut(s)	513
NciI	CCSGG	1 cut(s)	1565
NcoI	CCATGG	1 cut(s)	121
NdeI	CATATG	1 cut(s)	794
NdeII	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
NgoMIV	GCCGGC	1 cut(s)	1576
NlaIII	CATG	4 cut(s)	125, 736, 935, 1065
NlaIV	GGNNCC	8 cut(s)	146, 211, 480, 514, 1045, 1179, 1590, 1680
NmeAIII	GCCGAG	1 cut(s)	418
NmuCI	GTSAC	5 cut(s)	131, 545, 850, 1009, 1495
NsiI	ATGCAT	1 cut(s)	319
OliI	CACNNNNGTG	2 cut(s)	651, 861
PdiI	GCCGGC	1 cut(s)	1578
PdmI	GAANNNNTTC	1 cut(s)	1182
PfeI	GAWTC	1 cut(s)	1328
PkrI	GCNGC	6 cut(s)	66, 88, 164, 775, 868, 961
PleI	GAGTC	5 cut(s)	483, 718, 847, 1073, 1486
PluTI	GGCGCC	1 cut(s)	516
PmaCI	CACGTG	1 cut(s)	141
PmlI	CACGTG	1 cut(s)	141
PpsI	GAGTC	5 cut(s)	483, 718, 847, 1073, 1486
Ppu21I	YACGTR	2 cut(s)	141, 943
PpuMI	RGGWCCY	1 cut(s)	1679
PsiI	TTATAA	1 cut(s)	1705
Psp5II	RGGWCCY	1 cut(s)	1679
Psp6I	CCWGG	2 cut(s)	104, 560
PspCI	CACGTG	1 cut(s)	141
PspEI	GGTNACC	1 cut(s)	545
PspFI	CCCAGC	1 cut(s)	1426
PspGI	CCWGG	2 cut(s)	104, 560
PspN4I	GGNNCC	8 cut(s)	146, 211, 480, 514, 1045, 1179, 1590, 1680
PspPI	GGNCC	4 cut(s)	118, 1043, 1610, 1679
PspPPI	RGGWCCY	1 cut(s)	1679
PstI	CTGCAG	1 cut(s)	1192
PstNI	CAGNNNCTG	2 cut(s)	284, 1631
PsuI	RGATCY	2 cut(s)	125, 478
PvuII	CAGCTG	2 cut(s)	89, 953
RsaI	GTAC	2 cut(s)	939, 1133
RsaNI	GTAC	2 cut(s)	938, 1132
RseI	CAYNNNNRTG	6 cut(s)	651, 744, 843, 861, 1020, 1302
SaqAI	TTAA	7 cut(s)	59, 290, 452, 674, 1109, 1250, 1515
SatI	GCNGC	6 cut(s)	65, 87, 163, 774, 867, 960
Sau3AI	GATC	6 cut(s)	25, 125, 370, 478, 1306, 1352
Sau96I	GGNCC	4 cut(s)	118, 1043, 1610, 1679
SchI	GAGTC	5 cut(s)	483, 718, 847, 1073, 1487
ScrFI	CCNGG	3 cut(s)	106, 562, 1565
SduI	GDGCHC	3 cut(s)	99, 769, 882
SfaNI	GCATC	3 cut(s)	326, 1209, 1563
SfcI	CTRYAG	2 cut(s)	354, 1188
SfoI	GGCGCC	1 cut(s)	514
SinI	GGWCC	3 cut(s)	118, 1610, 1679
SmiMI	CAYNNNNRTG	6 cut(s)	651, 744, 843, 861, 1020, 1302
Sse9I	AATT	5 cut(s)	225, 267, 378, 453, 530
SsiI	CCGC	4 cut(s)	65, 180, 1047, 1222
SspDI	GGCGCC	1 cut(s)	512
StyD4I	CCNGG	3 cut(s)	104, 560, 1563
StyI	CCWWGG	1 cut(s)	121
TaaI	ACNGT	5 cut(s)	217, 298, 823, 1054, 1204
TaiI	ACGT	2 cut(s)	143, 945
TaqI	TCGA	4 cut(s)	21, 320, 802, 1105
TasI	AATT	5 cut(s)	225, 267, 378, 453, 530
TatI	WGTACW	1 cut(s)	937
TauI	GCSGC	1 cut(s)	67
TfiI	GAWTC	1 cut(s)	1328
Tru1I	TTAA	7 cut(s)	59, 290, 452, 674, 1109, 1250, 1515
Tru9I	TTAA	7 cut(s)	59, 290, 452, 674, 1109, 1250, 1515
TscAI	CASTG	2 cut(s)	301, 1452
TseFI	GTSAC	5 cut(s)	131, 545, 850, 1009, 1495
TseI	GCWGC	5 cut(s)	86, 162, 773, 866, 959
Tsp45I	GTSAC	5 cut(s)	131, 545, 850, 1009, 1495
TspGWI	ACGGA	2 cut(s)	187, 296
TspRI	CASTG	2 cut(s)	301, 1452
VneI	GTGCAC	1 cut(s)	95
VpaK11BI	GGWCC	3 cut(s)	118, 1610, 1679
XagI	CCTNNNNNAGG	1 cut(s)	803
XapI	RAATTY	3 cut(s)	267, 378, 530
XcmI	CCANNNNNNNNNTGG	3 cut(s)	112, 579, 1467
XmnI	GAANNNNTTC	1 cut(s)	1182
Zsp2I	ATGCAT	1 cut(s)	319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.