Rorug04G0197300

acetate butyrate--CoA ligase AAE7

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
34315452 .. 34318534
3083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0197300.1

Sequence Viewer

Length: 1815 bp
ATGCCTGTAATACCACATAAGTCTGTAACCATCATTTCTGTGACCTCAATTGATGAATCCCAAATGGAGAAAAGAGGACCCAAGAAGGCACAAACAACACATAATGACAAAGAAGAAGCAGAGCAATTGCACAGCATTGATAAGACACCCTACCTTCTACAATTTCCAAACCGCGTCATAGTTGACATCCACTGTAAAATCCCAATCAAGACACTCATCAAATGCAGGCGAGTATGCAAGTCTTGGCGATCTTTGTTCTCAGATCCTCGATTCACCAAAGACCTATTTGCCAGAACACCCGCTTGCCATTTGGTGATAGCTTCGTGTAGGTACTTCTTGCTCGACTTCAACGATGCTTCGAGCCCAAACGGTGTGGCAGCACTGAAAACGACATTTCATAGAAGCAGCGAAGACATTGTGGGATCATGTAATGGCTTCCTCTGCTTGTACAAGAAGGAGCTAAATTGTCACGGATTTTACATATCCAATCCCATTACATGTGAGTCTTTACCTCTTCCAAAACCTATCAAGCAAGATGATCCTCCTCCCATTTCTTGTGGGCCTTCTGCTGATGCCATCACTAATAACATATTGGCTTTTCTAGAATCCACTCGTCCAAAGTCTGTTAAGGAAATTGTGTATCAATCTTGTTGTGCATTTGGGTTTGGGTTTAGTCCCATCAGTGGTGTCTACAAAGTAGTTCTCTTTACTTCTTCAAGGCTCATAGAAGCTTCATCTCCGCGTGAGTTTGTGCTTAGAAGTGGACCTCCGAAGGTGATGGTTCTGACTGTTGGCTCTGCGAGTTGGAGACATATTGGGGACTCTGTTATGTGCAATTTTGATCATCAGTCAGGAATTTATCTTAATGGATGTCTTCATTGGATAGGTCTACCCACTCAGGGTTCTCGTTTTATATATGCGTTTGACATTGAAAGTGAGTGTTTCAAACAGATACATCTACCTCCTTTTATTTTGGATAACAAGATAACTAAATGTAACCTTGGAGTTGTGAACGGGTGCCTCTCTATAACTGTTCCTTCAAGTTATAATTTCACAGTTTGGGTGAAGAAGGATCATGGTGTTAAGAAGCCTTGGACTAAAGAGCTTGATATTAAAGTGGATTTGCATTTAGGGTGTGGTTCTTCAACTGAAGTTCTGAATTCTTCAAAGGAACGGAAAGTCTTGTTGTTACAGAATAGGTTGCAGGCTCATATTCCTGGAAGAAGGGGCTTTGTGGGGGTTGAGGTTGATGGGATACCATCTTTGATTGACGCATCATATCTCTACGTTCCAAGCTTTGTTTCACTTAAAGATGTCTTTGGGGGTCAAAACTTGAAGTCTGGTAGATCTGAAGAATCGAGTGTTAGAGAAGCTGGTGAGTTGCAACAACCTGCACCAAATGAGACAAAGCTCAGAAGGACCTGCAATTTAAAAGACCAATCTGTCAAAAGTCAAAGAGGGCCAGGTAATGTGAAAGCTAATGCAGTGGATTATGGGAATGCTGAAGCAGCACAGCGGAATCTTCTATATAAAGCTAATGGATTAAATCAAGGGAATGTGCAATCTAAAGCTGCAGTAGTTGAACACAAACAACAGGACATGAGAGCACCGAAGAAGGCAAAAACCACAGGTAGGGCTCAACCAATAGAAGCCTCTGCCTCCCAAATAGTGCCGATATCACCATCATCATCCCAGTCCACACAGCCATCTGTTTCGCTGCCATTAACTGGAAATCAGTTCATTCATCCCACAACTGTTCTAAAGATGAAGACCAAGCCCCCTTCAAAGAGCAAGAGAGCTCCAGAAAAGAAGTAA

Protein Analysis

604

Amino Acids

66.66

Weight (kDa)

9.36

Isoelectric Point (pI)

53.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 52 - 93 3.1e-07 F-box domain
FBA_3 PF08268 125 - 368 7.8e-19 F-box associated beta propeller domain
FBA_1 PF07734 141 - 435 3.1e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013183)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1047
AasI GACNNNNNNGTC 1 cut(s) 1442
Acc36I ACCTGC 2 cut(s) 1399, 1430
AccB1I GGYRCC 1 cut(s) 1017
AccB7I CCANNNNNTGG 1 cut(s) 1727
AccI GTMKAC 2 cut(s) 690, 889
AccII CGCG 2 cut(s) 174, 742
AciI CCGC 4 cut(s) 172, 300, 740, 1516
AclWI GGATC 4 cut(s) 257, 430, 533, 1080
AcsI RAATTY 2 cut(s) 855, 1159
AcuI CTGAAG 3 cut(s) 1170, 1371, 1524
AfaI GTAC 2 cut(s) 332, 449
AfiI CCNNNNNNNGG 4 cut(s) 683, 899, 1632, 1727
AflIII ACRYGT 1 cut(s) 497
AjnI CCWGG 2 cut(s) 1216, 1462
AjuI GAANNNNNNNTTGG 2 cut(s) 1285, 1317
Alw21I GWGCWC 2 cut(s) 1609, 1801
Alw26I GTCTC 2 cut(s) 802, 1397
AlwI GGATC 4 cut(s) 257, 430, 533, 1080
AoxI GGCC 2 cut(s) 560, 1460
ApeKI GCWGC 5 cut(s) 377, 405, 1508, 1571, 1717
ApoI RAATTY 2 cut(s) 855, 1159
AspS9I GGNCC 5 cut(s) 77, 560, 764, 1419, 1460
AsuHPI GGTGA 6 cut(s) 265, 325, 787, 1075, 1388, 1671
AvaII GGWCC 3 cut(s) 77, 764, 1419
BanI GGYRCC 1 cut(s) 1017
BanII GRGCYC 3 cut(s) 365, 1639, 1801
BbsI GAAGAC 3 cut(s) 417, 866, 1775
Bbv12I GWGCWC 2 cut(s) 1609, 1801
BbvI GCAGC 5 cut(s) 389, 417, 1520, 1558, 1704
BccI CCATC 8 cut(s) 38, 584, 686, 772, 1244, 1267, 1690, 1714
BciT130I CCWGG 2 cut(s) 1218, 1464
BciVI GTATCC 1 cut(s) 1248
BclI TGATCA 1 cut(s) 841
BcoDI GTCTC 2 cut(s) 802, 1397
BfaI CTAG 1 cut(s) 602
BfmI CTRYAG 1 cut(s) 1572
BfuAI ACCTGC 2 cut(s) 1399, 1430
BfuI GTATCC 1 cut(s) 1248
BglII AGATCT 1 cut(s) 1346
BisI GCNGC 5 cut(s) 378, 406, 1509, 1572, 1718
BlsI GCNGC 5 cut(s) 379, 407, 1510, 1573, 1719
Bme1390I CCNGG 2 cut(s) 1218, 1464
Bme18I GGWCC 3 cut(s) 77, 764, 1419
BmgT120I GGNCC 5 cut(s) 77, 560, 764, 1419, 1460
BmiI GGNNCC 2 cut(s) 79, 1019
BmrFI CCNGG 2 cut(s) 1218, 1464
BmrI ACTGGG 1 cut(s) 1687
BmsI GCATC 3 cut(s) 343, 562, 1283
BmuI ACTGGG 1 cut(s) 1687
BpiI GAAGAC 3 cut(s) 417, 866, 1775
BpmI CTGGAG 1 cut(s) 1785
BsaJI CCNNGG 2 cut(s) 1000, 1091
Bsc4I CCNNNNNNNGG 4 cut(s) 683, 899, 1632, 1727
Bse1I ACTGG 2 cut(s) 1693, 1732
BseBI CCWGG 2 cut(s) 1218, 1464
BseDI CCNNGG 2 cut(s) 1000, 1091
BseGI GGATG 4 cut(s) 186, 875, 1688, 1744
BseLI CCNNNNNNNGG 4 cut(s) 683, 899, 1632, 1727
BseMII CTCAG 3 cut(s) 273, 911, 1426
BseNI ACTGG 2 cut(s) 1693, 1732
BseRI GAGGAG 1 cut(s) 534
BseXI GCAGC 5 cut(s) 389, 417, 1520, 1558, 1704
BsgI GTGCAG 1 cut(s) 1377
Bsh1236I CGCG 2 cut(s) 174, 742
BshFI GGCC 2 cut(s) 562, 1462
BshNI GGYRCC 1 cut(s) 1017
BsiHKAI GWGCWC 2 cut(s) 1609, 1801
BslFI GGGAC 2 cut(s) 660, 833
BslI CCNNNNNNNGG 4 cut(s) 683, 899, 1632, 1727
BsmAI GTCTC 2 cut(s) 802, 1397
BsmFI GGGAC 2 cut(s) 660, 833
BsmI GAATGC 1 cut(s) 1504
BsnI GGCC 2 cut(s) 562, 1462
Bsp1286I GDGCHC 4 cut(s) 365, 1609, 1639, 1801
Bsp1407I TGTACA 1 cut(s) 447
Bsp143I GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
BspACI CCGC 4 cut(s) 172, 300, 740, 1516
BspANI GGCC 2 cut(s) 562, 1462
BspCNI CTCAG 3 cut(s) 272, 910, 1425
BspFNI CGCG 2 cut(s) 174, 742
BspLI GGNNCC 2 cut(s) 79, 1019
BspMAI CTGCAG 1 cut(s) 1576
BspMI ACCTGC 2 cut(s) 1399, 1430
BspPI GGATC 4 cut(s) 257, 430, 533, 1080
BspT107I GGYRCC 1 cut(s) 1017
BsrGI TGTACA 1 cut(s) 447
BsrI ACTGG 2 cut(s) 1693, 1732
BssECI CCNNGG 2 cut(s) 1000, 1091
BssMI GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
BssT1I CCWWGG 2 cut(s) 1000, 1091
Bst2UI CCWGG 2 cut(s) 1218, 1464
Bst4CI ACNGT 6 cut(s) 194, 371, 790, 1033, 1057, 1756
Bst6I CTCTTC 1 cut(s) 519
BstAUI TGTACA 1 cut(s) 447
BstC8I GCNNGC 3 cut(s) 227, 304, 1206
BstDEI CTNAG 4 cut(s) 259, 755, 897, 1412
BstF5I GGATG 4 cut(s) 186, 875, 1688, 1744
BstFNI CGCG 2 cut(s) 174, 742
BstKTI GATC 7 cut(s) 251, 265, 425, 541, 844, 1075, 1349
BstMAI GTCTC 2 cut(s) 802, 1397
BstMBI GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
BstMWI GCNNNNNNNGC 2 cut(s) 441, 1508
BstNI CCWGG 2 cut(s) 1218, 1464
BstNSI RCATGY 1 cut(s) 501
BstSCI CCNGG 2 cut(s) 1216, 1462
BstSFI CTRYAG 1 cut(s) 1572
BstUI CGCG 2 cut(s) 174, 742
BstV1I GCAGC 5 cut(s) 389, 417, 1520, 1558, 1704
BstV2I GAAGAC 3 cut(s) 417, 866, 1775
BstX2I RGATCY 2 cut(s) 262, 1346
BstYI RGATCY 2 cut(s) 262, 1346
BsuI GTATCC 1 cut(s) 1248
BsuRI GGCC 2 cut(s) 562, 1462
BtsCI GGATG 4 cut(s) 186, 875, 1688, 1744
BtsI GCAGTG 1 cut(s) 1491
BtsIMutI CAGTG 4 cut(s) 190, 380, 688, 1491
BveI ACCTGC 2 cut(s) 1399, 1430
Cac8I GCNNGC 3 cut(s) 227, 304, 1206
Cfr13I GGNCC 5 cut(s) 77, 560, 764, 1419, 1460
CseI GACGC 2 cut(s) 163, 1280
Csp6I GTAC 2 cut(s) 331, 448
CspCI CAANNNNNGTGG 2 cut(s) 354, 389
CviAII CATG 4 cut(s) 426, 498, 1076, 1600
CviQI GTAC 2 cut(s) 331, 448
DdeI CTNAG 4 cut(s) 259, 755, 897, 1412
DpnI GATC 7 cut(s) 250, 264, 424, 540, 843, 1074, 1348
DpnII GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
DraI TTTAAA 1 cut(s) 1431
DrdI GACNNNNNNGTC 1 cut(s) 1442
DseDI GACNNNNNNGTC 1 cut(s) 1442
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Ecl136II GAGCTC 1 cut(s) 1799
Eco130I CCWWGG 2 cut(s) 1000, 1091
Eco24I GRGCYC 3 cut(s) 365, 1639, 1801
Eco32I GATATC 1 cut(s) 1677
Eco47I GGWCC 3 cut(s) 77, 764, 1419
Eco53kI GAGCTC 1 cut(s) 1799
Eco57I CTGAAG 3 cut(s) 1170, 1371, 1524
EcoICRI GAGCTC 1 cut(s) 1799
EcoO109I RGGNCCY 2 cut(s) 77, 1419
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 2 cut(s) 1216, 1462
EcoRV GATATC 1 cut(s) 1677
EcoT14I CCWWGG 2 cut(s) 1000, 1091
EcoT38I GRGCYC 3 cut(s) 365, 1639, 1801
ErhI CCWWGG 2 cut(s) 1000, 1091
FaeI CATG 4 cut(s) 429, 501, 1079, 1603
FaqI GGGAC 2 cut(s) 660, 833
FatI CATG 4 cut(s) 425, 497, 1075, 1599
FauI CCCGC 1 cut(s) 307
FbaI TGATCA 1 cut(s) 841
FblI GTMKAC 2 cut(s) 690, 889
Fnu4HI GCNGC 5 cut(s) 378, 406, 1509, 1572, 1718
FokI GGATG 4 cut(s) 173, 882, 1675, 1731
FriOI GRGCYC 3 cut(s) 365, 1639, 1801
Fsp4HI GCNGC 5 cut(s) 378, 406, 1509, 1572, 1718
FspBI CTAG 1 cut(s) 602
GluI GCNGC 5 cut(s) 378, 406, 1509, 1572, 1718
GsuI CTGGAG 1 cut(s) 1785
HaeIII GGCC 2 cut(s) 562, 1462
HgaI GACGC 2 cut(s) 163, 1280
Hin1II CATG 4 cut(s) 429, 501, 1079, 1603
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 2 cut(s) 729, 1294
HinfI GANTC 7 cut(s) 56, 270, 503, 605, 821, 1355, 1519
HphI GGTGA 6 cut(s) 265, 325, 787, 1075, 1388, 1671
Hpy166II GTNNAC 6 cut(s) 184, 691, 764, 890, 1012, 1698
Hpy188I TCNGA 6 cut(s) 262, 771, 786, 1158, 1351, 1415
Hpy188III TCNNGA 4 cut(s) 208, 602, 852, 1802
Hpy8I GTNNAC 6 cut(s) 184, 691, 764, 890, 1012, 1698
HpyCH4III ACNGT 6 cut(s) 194, 371, 790, 1033, 1057, 1756
HpyCH4IV ACGT 1 cut(s) 1287
HpyF10VI GCNNNNNNNGC 2 cut(s) 441, 1508
HpyF3I CTNAG 4 cut(s) 259, 755, 897, 1412
HpySE526I ACGT 1 cut(s) 1287
Hsp92II CATG 4 cut(s) 429, 501, 1079, 1603
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
LmnI GCTCC 2 cut(s) 457, 1804
Lsp1109I GCAGC 5 cut(s) 389, 417, 1520, 1558, 1704
LweI GCATC 3 cut(s) 343, 562, 1283
MaeI CTAG 1 cut(s) 602
MaeII ACGT 1 cut(s) 1287
MaeIII GTNAC 5 cut(s) 25, 40, 467, 995, 1188
MalI GATC 7 cut(s) 250, 264, 424, 540, 843, 1074, 1348
MboI GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
MfeI CAATTG 2 cut(s) 48, 125
MflI RGATCY 2 cut(s) 262, 1346
MhlI GDGCHC 4 cut(s) 365, 1609, 1639, 1801
MlyI GAGTC 2 cut(s) 512, 815
MmeI TCCRAC 1 cut(s) 785
MseI TTAA 8 cut(s) 627, 864, 1083, 1113, 1308, 1430, 1544, 1724
MslI CAYNNNNRTG 1 cut(s) 38
MspA1I CMGCKG 1 cut(s) 1516
MspR9I CCNGG 2 cut(s) 1218, 1464
MunI CAATTG 2 cut(s) 48, 125
Mva1269I GAATGC 1 cut(s) 1504
MvaI CCWGG 2 cut(s) 1218, 1464
MvnI CGCG 2 cut(s) 174, 742
MwoI GCNNNNNNNGC 2 cut(s) 441, 1508
NdeII GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
NlaIII CATG 4 cut(s) 429, 501, 1079, 1603
NlaIV GGNNCC 2 cut(s) 79, 1019
NmuCI GTSAC 2 cut(s) 40, 467
NspI RCATGY 1 cut(s) 501
PciI ACATGT 1 cut(s) 497
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 1 cut(s) 1504
PfeI GAWTC 5 cut(s) 56, 270, 605, 1355, 1519
PflMI CCANNNNNTGG 1 cut(s) 1727
PfoI TCCNGGA 1 cut(s) 1216
PkrI GCNGC 5 cut(s) 379, 407, 1510, 1573, 1719
PleI GAGTC 2 cut(s) 511, 815
PpsI GAGTC 2 cut(s) 511, 815
PpuMI RGGWCCY 2 cut(s) 77, 1419
PscI ACATGT 1 cut(s) 497
PsiI TTATAA 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 1801
Psp5II RGGWCCY 2 cut(s) 77, 1419
Psp6I CCWGG 2 cut(s) 1216, 1462
PspGI CCWGG 2 cut(s) 1216, 1462
PspN4I GGNNCC 2 cut(s) 79, 1019
PspPI GGNCC 5 cut(s) 77, 560, 764, 1419, 1460
PspPPI RGGWCCY 2 cut(s) 77, 1419
PstI CTGCAG 1 cut(s) 1576
PsuI RGATCY 2 cut(s) 262, 1346
RsaI GTAC 2 cut(s) 332, 449
RsaNI GTAC 2 cut(s) 331, 448
RseI CAYNNNNRTG 1 cut(s) 38
SacI GAGCTC 1 cut(s) 1801
SaqAI TTAA 8 cut(s) 627, 864, 1083, 1113, 1308, 1430, 1544, 1724
SatI GCNGC 5 cut(s) 378, 406, 1509, 1572, 1718
Sau3AI GATC 7 cut(s) 248, 262, 422, 538, 841, 1072, 1346
Sau96I GGNCC 5 cut(s) 77, 560, 764, 1419, 1460
SchI GAGTC 2 cut(s) 512, 815
ScrFI CCNGG 2 cut(s) 1218, 1464
SduI GDGCHC 4 cut(s) 365, 1609, 1639, 1801
SfaNI GCATC 3 cut(s) 343, 562, 1283
SfcI CTRYAG 1 cut(s) 1572
SinI GGWCC 3 cut(s) 77, 764, 1419
SmiMI CAYNNNNRTG 1 cut(s) 38
SsiI CCGC 4 cut(s) 172, 300, 740, 1516
SspMI CTAG 1 cut(s) 602
SstI GAGCTC 1 cut(s) 1801
StyD4I CCNGG 2 cut(s) 1216, 1462
StyI CCWWGG 2 cut(s) 1000, 1091
TaaI ACNGT 6 cut(s) 194, 371, 790, 1033, 1057, 1756
TaiI ACGT 1 cut(s) 1290
TaqI TCGA 4 cut(s) 268, 342, 359, 1358
TatI WGTACW 1 cut(s) 447
TfiI GAWTC 5 cut(s) 56, 270, 605, 1355, 1519
Tru1I TTAA 8 cut(s) 627, 864, 1083, 1113, 1308, 1430, 1544, 1724
Tru9I TTAA 8 cut(s) 627, 864, 1083, 1113, 1308, 1430, 1544, 1724
TscAI CASTG 4 cut(s) 197, 387, 688, 1491
TseFI GTSAC 2 cut(s) 40, 467
TseI GCWGC 5 cut(s) 377, 405, 1508, 1571, 1717
Tsp45I GTSAC 2 cut(s) 40, 467
TspDTI ATGAA 7 cut(s) 69, 386, 723, 866, 1729, 1733, 1781
TspGWI ACGGA 2 cut(s) 486, 1189
TspRI CASTG 4 cut(s) 197, 387, 688, 1491
Van91I CCANNNNNTGG 1 cut(s) 1727
VpaK11BI GGWCC 3 cut(s) 77, 764, 1419
XapI RAATTY 2 cut(s) 855, 1159
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 1 cut(s) 501
XmiI GTMKAC 2 cut(s) 690, 889
XspI CTAG 1 cut(s) 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.