Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0010403

Physical Location & Seq

Genomic Coordinates Reverse (-)

11679226 .. 11683848

Gene Structure 4623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGATAAGAGACAACTTGCTCAACGGTAAAAAAGAAGAAGGAAAAAATGTGCGACCATTTCAAAGCGAGCTTCTCGCAAACTCAAAGGCAATCTCTATCTGGTGGAGAGGAGAGAGAGCGATGACGATGACGATGCTAGTGAGCATTGTCGGTCTTCTTCTCCTTATGCTTCTTCTGATCCTCCTCCTCAACTTCCTCGCCTGCAAACCATGGCGCTTCTTCTCCTCCTCCTCTCGTTCTCGCACTATCAAGGTCGGTGAGCTTGAGAGACCCCTTGTTTCGGATGATGCGGATCTTGTCCGGAACCAGGGCATTGATTTTCCAAGAGGTTACGATCGAGAGGGAGCATGCTTTCCAAGTGAAGGGAATTTTCGCTCACCCCGACCACAAGGACTTGTGCATAAGCCGAGGCTTCCCACTGCAGCTCCCATTTTGGCTCAAGGTGATAGCTTGGTCCTGGATGTGATTTCTGATGCTCCAGAGGATATTTTGGTTGGTCAGACACTGAAGCGTCCATTTGCAATCCAGCAGTTAGTGGAAGAGCAGAAGAACGGTAGCCAGAGAACCTGCCTCAACCTGGAGGTCATATCTGGTCCTTCCCATGGACTTCGTTGTTCCATACAGTCAACAAGTACCTCCAGGCTTCCTATGACCCTAGGAAGGGTTCCTCCAAGTGATTTATTATTGAAGGACTCGGAGGTGTCAGGAAAGCATGCATTGATAAACTGGAATTCAAATAAAATGAAATGGGAGCTGGTAGACATGGGCAGCCTGAATGGAACACTTCTGAACTCTCAGCCAATCAATAATCCTGATTCTGGAAGTAGACATTGGGGTAACCCCATGGAGCTTGCAAGTGGAGACATAATAACACTCGGAACGACCTCAAAAGTGTTTGTTCATATAGCATCGGAAACTGAGAGTCAGGTCCCGTTTGGAGTTGGCATGGCTTCAGATCCCATGGCTCTGCGTCGTGGAGGGAAGAAGCTTCCAATGGAAGATGTGTGCTACTATCAATGGCCTCTTCCTGGGGTCGATCAGTTCGGACTTTTTGGTATCTGTGATGGACATGGTGGAGCAGAGGCCGCCATATCTGCTAGCAAGCTTCTTCCTCAGATCATTGCCAACATTTTATCGGATTCGCTAAAAAGGGAGAGGGTCTTGTCAGTATGTGATGCTTCAGATGTTCTCAGGGAGTCATTTTTACAGACAGAAACATGCATGAATCACCATTACGAGGGCTGTACTGCGACTCTGCTTCTAGTTTGGACTGATGGTAGTGACAGTTTCTTTGTACAATGTGCAAATCTTGGAGATTCAGCTTGTGTTATGAATGTTGATGGGAAGCTGATTAAGATGACCGAAGATCATAGAATTAGTAGTTCTGGTGAAAGACTCCGAATCCAGGAAACGGGAGTGCCTTTGAAAGAGGGTGAAACACGACTATGTGGTTTGAACCTTGCTCGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCCCGCTTCAGTTCAGAACCATACATTAGCCCAGTGGTGCATATCAATCAAGCGAGCAATGCCTTTGCGATAATGGCCAGTGATGGCTTATGGGATGTAATTAGTCCGAAGAAGGCGACTCAGCTAGTCCTTCAGACGAAAGAGAGATACTCGATGGACGGGGAGAATTTGGCGGAGAAGAATGCTAATATTTTGTTGAGTGAGGCTAGAACTGTGCGAACAAAGGATAATACTTCTATAATTTTCTTAGATTTTGATACTTCTAGGATCGCATGTAAATCTGAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050408 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PP2C

Protein Analysis

597

Amino Acids

65.67

Weight (kDa)

6.13

Isoelectric Point (pI)

47.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	194 - 301	1.6e-07	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	218 - 293	1.1e-14	FHA domain
PP2C	PF00481	324 - 577	1.3e-43	Protein phosphatase 2C
PP2C_2	PF13672	351 - 458	2.3e-06	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19280 AT5G19280
fragaria_vesca	FvH4_4g14950 FvH4_4g14950
malus_domestica	MD13G1186700.v1.1 MD16G1187600.v1.1
prunus_persica	Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1
pyrus_communis	pycom13g16160 pycom16g15740
rosa_chinensis	RchiOBHm_Chr4g0417151
rosa_laevigata	RLG00000007927
rosa_multiflora	Rmu_sc0000646.1_g000022
rosa_roxburghii	Rroxscaffold_5G00360970
rosa_rugosa	Rorug04G0146200
rosa_samantha	Rh4AG209000 Rh4BG205900 Rh4CG220000 Rh4DG206700
rosa_wichuraiana	Rw4G017700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	575
AccI	GTMKAC	2 cut(s)	759, 826
AccIII	TCCGGA	1 cut(s)	300
AciI	CCGC	4 cut(s)	290, 1086, 1504, 1673
AclWI	GGATC	4 cut(s)	172, 300, 950, 1775
AcoI	YGGCCR	1 cut(s)	1575
AcsI	RAATTY	4 cut(s)	367, 730, 1481, 1666
AcuI	CTGAAG	5 cut(s)	527, 936, 1164, 1492, 1616
AfaI	GTAC	3 cut(s)	634, 1246, 1296
AgsI	TTSAA	5 cut(s)	62, 688, 735, 1426, 1456
AjnI	CCWGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
AjuI	GAANNNNNNNTTGG	2 cut(s)	814, 846
Alw26I	GTCTC	4 cut(s)	3, 262, 855, 1470
AlwI	GGATC	4 cut(s)	172, 300, 950, 1775
AlwNI	CAGNNNCTG	1 cut(s)	505
Aor13HI	TCCGGA	1 cut(s)	300
AoxI	GGCC	3 cut(s)	1019, 1083, 1575
ApeKI	GCWGC	2 cut(s)	422, 768
ApoI	RAATTY	4 cut(s)	367, 730, 1481, 1666
ArsI	GACNNNNNNTTYG	2 cut(s)	1274, 1306
AspA2I	CCTAGG	1 cut(s)	655
AspLEI	GCGC	1 cut(s)	216
AspS9I	GGNCC	3 cut(s)	454, 593, 928
AsuHPI	GGTGA	6 cut(s)	269, 369, 455, 1220, 1400, 1445
AsuNHI	GCTAGC	1 cut(s)	1097
AvaII	GGWCC	3 cut(s)	454, 593, 928
AvrII	CCTAGG	1 cut(s)	655
BalI	TGGCCA	1 cut(s)	1577
BbsI	GAAGAC	1 cut(s)	146
BbvI	GCAGC	2 cut(s)	434, 780
BccI	CCATC	5 cut(s)	1058, 1268, 1334, 1577, 1648
BcgI	CGANNNNNNTGC	2 cut(s)	115, 149
BciT130I	CCWGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
BcoDI	GTCTC	4 cut(s)	3, 262, 855, 1470
BfaI	CTAG	7 cut(s)	137, 656, 1098, 1262, 1625, 1707, 1764
BfmI	CTRYAG	1 cut(s)	420
BfoI	RGCGCY	1 cut(s)	217
BfuAI	ACCTGC	1 cut(s)	575
BisI	GCNGC	3 cut(s)	423, 769, 1086
BlnI	CCTAGG	1 cut(s)	655
BlsI	GCNGC	3 cut(s)	424, 770, 1087
Bme1390I	CCNGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
Bme18I	GGWCC	3 cut(s)	454, 593, 928
BmgT120I	GGNCC	3 cut(s)	454, 593, 928
BmiI	GGNNCC	3 cut(s)	305, 666, 930
BmrFI	CCNGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
BmrI	ACTGGG	1 cut(s)	1526
BmsI	GCATC	6 cut(s)	123, 277, 463, 917, 1165, 1458
BmtI	GCTAGC	1 cut(s)	1101
BmuI	ACTGGG	1 cut(s)	1526
BpiI	GAAGAC	1 cut(s)	146
BplI	GAGNNNNNCTC	2 cut(s)	1634, 1666
BpmI	CTGGAG	3 cut(s)	462, 599, 622
BpuEI	CTTGAG	2 cut(s)	284, 423
BsaBI	GATNNNNATC	1 cut(s)	291
BsaI	GGTCTC	1 cut(s)	262
BsaJI	CCNNGG	8 cut(s)	209, 307, 407, 601, 655, 843, 960, 1028
BsaWI	WCCGGW	1 cut(s)	300
BsaXI	ACNNNNNCTCC	2 cut(s)	409, 439
Bse1I	ACTGG	3 cut(s)	731, 1532, 1578
Bse3DI	GCAATG	2 cut(s)	1119, 1564
Bse8I	GATNNNNATC	1 cut(s)	291
BseAI	TCCGGA	1 cut(s)	300
BseBI	CCWGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
BseDI	CCNNGG	8 cut(s)	209, 307, 407, 601, 655, 843, 960, 1028
BseGI	GGATG	4 cut(s)	289, 466, 1473, 1600
BseJI	GATNNNNATC	1 cut(s)	291
BseMI	GCAATG	2 cut(s)	1119, 1564
BseMII	CTCAG	5 cut(s)	809, 909, 1127, 1204, 1634
BseNI	ACTGG	3 cut(s)	731, 1532, 1578
BseRI	GAGGAG	6 cut(s)	123, 173, 176, 214, 217, 220
BseXI	GCAGC	2 cut(s)	434, 780
Bsh1285I	CGRYCG	1 cut(s)	337
BshFI	GGCC	3 cut(s)	1021, 1085, 1577
BsiEI	CGRYCG	1 cut(s)	337
BsiSI	CCGG	1 cut(s)	301
BslFI	GGGAC	1 cut(s)	914
BsmAI	GTCTC	4 cut(s)	3, 262, 855, 1470
BsmFI	GGGAC	1 cut(s)	914
BsmI	GAATGC	1 cut(s)	1687
BsnI	GGCC	3 cut(s)	1021, 1085, 1577
Bso31I	GGTCTC	1 cut(s)	262
Bsp13I	TCCGGA	1 cut(s)	300
Bsp1407I	TGTACA	1 cut(s)	1294
Bsp143I	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
Bsp19I	CCATGG	4 cut(s)	209, 601, 843, 960
BspACI	CCGC	4 cut(s)	290, 1086, 1504, 1673
BspANI	GGCC	3 cut(s)	1021, 1085, 1577
BspCNI	CTCAG	5 cut(s)	808, 910, 1126, 1203, 1633
BspEI	TCCGGA	1 cut(s)	300
BspLI	GGNNCC	3 cut(s)	305, 666, 930
BspMAI	CTGCAG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	575
BspOI	GCTAGC	1 cut(s)	1101
BspPI	GGATC	4 cut(s)	172, 300, 950, 1775
BspQI	GCTCTTC	1 cut(s)	534
BspTNI	GGTCTC	1 cut(s)	262
BsrDI	GCAATG	2 cut(s)	1119, 1564
BsrGI	TGTACA	1 cut(s)	1294
BsrI	ACTGG	3 cut(s)	731, 1532, 1578
BssECI	CCNNGG	8 cut(s)	209, 307, 407, 601, 655, 843, 960, 1028
BssMI	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
BssT1I	CCWWGG	5 cut(s)	209, 601, 655, 843, 960
Bst2UI	CCWGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
Bst4CI	ACNGT	5 cut(s)	26, 554, 624, 1286, 1714
Bst6I	CTCTTC	2 cut(s)	534, 1029
BstAUI	TGTACA	1 cut(s)	1294
BstC8I	GCNNGC	8 cut(s)	68, 202, 349, 714, 852, 1099, 1103, 1555
BstDEI	CTNAG	6 cut(s)	795, 918, 1113, 1190, 1620, 1747
BstDSI	CCRYGG	4 cut(s)	209, 601, 843, 960
BstEII	GGTNACC	1 cut(s)	836
BstF5I	GGATG	4 cut(s)	289, 466, 1473, 1600
BstH2I	RGCGCY	1 cut(s)	217
BstHHI	GCGC	1 cut(s)	216
BstKTI	GATC	8 cut(s)	180, 295, 337, 958, 1039, 1119, 1369, 1770
BstMAI	GTCTC	4 cut(s)	3, 262, 855, 1470
BstMBI	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
BstMCI	CGRYCG	1 cut(s)	337
BstMWI	GCNNNNNNNGC	4 cut(s)	1085, 1094, 1559, 1574
BstNI	CCWGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
BstNSI	RCATGY	4 cut(s)	351, 716, 1221, 1776
BstPI	GGTNACC	1 cut(s)	836
BstSCI	CCNGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
BstSFI	CTRYAG	1 cut(s)	420
BstV1I	GCAGC	2 cut(s)	434, 780
BstV2I	GAAGAC	1 cut(s)	146
BstX2I	RGATCY	2 cut(s)	292, 955
BstYI	RGATCY	2 cut(s)	292, 955
BsuRI	GGCC	3 cut(s)	1021, 1085, 1577
BtgI	CCRYGG	4 cut(s)	209, 601, 843, 960
BtgZI	GCGATG	1 cut(s)	134
BtsCI	GGATG	4 cut(s)	289, 466, 1473, 1600
BtsI	GCAGTG	1 cut(s)	417
BtsIMutI	CAGTG	4 cut(s)	417, 503, 1539, 1585
BveI	ACCTGC	1 cut(s)	575
Cac8I	GCNNGC	8 cut(s)	68, 202, 349, 714, 852, 1099, 1103, 1555
CaiI	CAGNNNCTG	1 cut(s)	505
CfoI	GCGC	1 cut(s)	216
Cfr13I	GGNCC	3 cut(s)	454, 593, 928
CseI	GACGC	2 cut(s)	500, 959
Csp6I	GTAC	3 cut(s)	633, 1245, 1295
CviQI	GTAC	3 cut(s)	633, 1245, 1295
DdeI	CTNAG	6 cut(s)	795, 918, 1113, 1190, 1620, 1747
DpnI	GATC	8 cut(s)	179, 294, 336, 957, 1038, 1118, 1368, 1769
DpnII	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
EaeI	YGGCCR	1 cut(s)	1575
Eam1104I	CTCTTC	2 cut(s)	534, 1029
EarI	CTCTTC	2 cut(s)	534, 1029
EciI	GGCGGA	1 cut(s)	1688
Eco130I	CCWWGG	5 cut(s)	209, 601, 655, 843, 960
Eco31I	GGTCTC	1 cut(s)	262
Eco47I	GGWCC	3 cut(s)	454, 593, 928
Eco57I	CTGAAG	5 cut(s)	527, 936, 1164, 1492, 1616
Eco91I	GGTNACC	1 cut(s)	836
EcoO109I	RGGNCCY	1 cut(s)	928
EcoO65I	GGTNACC	1 cut(s)	836
EcoRI	GAATTC	1 cut(s)	730
EcoRII	CCWGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
EcoT14I	CCWWGG	5 cut(s)	209, 601, 655, 843, 960
EcoT22I	ATGCAT	2 cut(s)	718, 1223
ErhI	CCWWGG	5 cut(s)	209, 601, 655, 843, 960
FaqI	GGGAC	1 cut(s)	914
FauI	CCCGC	1 cut(s)	1511
FblI	GTMKAC	2 cut(s)	759, 826
Fnu4HI	GCNGC	3 cut(s)	423, 769, 1086
FokI	GGATG	4 cut(s)	296, 473, 1480, 1607
Fsp4HI	GCNGC	3 cut(s)	423, 769, 1086
FspBI	CTAG	7 cut(s)	137, 656, 1098, 1262, 1625, 1707, 1764
GlaI	GCGC	1 cut(s)	215
GluI	GCNGC	3 cut(s)	423, 769, 1086
GsuI	CTGGAG	3 cut(s)	462, 599, 622
HaeII	RGCGCY	1 cut(s)	217
HaeIII	GGCC	3 cut(s)	1021, 1085, 1577
HapII	CCGG	1 cut(s)	301
HgaI	GACGC	2 cut(s)	500, 959
HhaI	GCGC	1 cut(s)	216
Hin6I	GCGC	1 cut(s)	214
HinP1I	GCGC	1 cut(s)	214
HincII	GTYRAC	1 cut(s)	627
HindII	GTYRAC	1 cut(s)	627
HindIII	AAGCTT	2 cut(s)	986, 1103
HpaII	CCGG	1 cut(s)	301
HphI	GGTGA	6 cut(s)	269, 369, 455, 1220, 1400, 1445
Hpy166II	GTNNAC	3 cut(s)	627, 760, 827
Hpy188III	TCNNGA	7 cut(s)	301, 338, 479, 705, 812, 819, 1788
Hpy8I	GTNNAC	3 cut(s)	627, 760, 827
Hpy99I	CGWCG	1 cut(s)	975
HpyAV	CCTTC	7 cut(s)	32, 356, 606, 654, 682, 1606, 1640
HpyCH4III	ACNGT	5 cut(s)	26, 554, 624, 1286, 1714
HpyCH4V	TGCA	9 cut(s)	204, 400, 422, 521, 716, 854, 1221, 1304, 1540
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1085, 1094, 1559, 1574
HpyF3I	CTNAG	6 cut(s)	795, 918, 1113, 1190, 1620, 1747
HspAI	GCGC	1 cut(s)	214
Kpn2I	TCCGGA	1 cut(s)	300
Kzo9I	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
LguI	GCTCTTC	1 cut(s)	534
LmnI	GCTCC	6 cut(s)	344, 430, 481, 751, 847, 1076
Lsp1109I	GCAGC	2 cut(s)	434, 780
LweI	GCATC	6 cut(s)	123, 277, 463, 917, 1165, 1458
MaeI	CTAG	7 cut(s)	137, 656, 1098, 1262, 1625, 1707, 1764
MaeIII	GTNAC	3 cut(s)	329, 836, 1280
MalI	GATC	8 cut(s)	179, 294, 336, 957, 1038, 1118, 1368, 1769
MboI	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
MflI	RGATCY	2 cut(s)	292, 955
MlsI	TGGCCA	1 cut(s)	1577
MluCI	AATT	7 cut(s)	367, 730, 1374, 1481, 1599, 1666, 1740
MluNI	TGGCCA	1 cut(s)	1577
MlyI	GAGTC	6 cut(s)	686, 931, 1205, 1246, 1389, 1612
Mox20I	TGGCCA	1 cut(s)	1577
Mph1103I	ATGCAT	2 cut(s)	718, 1223
MroI	TCCGGA	1 cut(s)	300
MscI	TGGCCA	1 cut(s)	1577
MseI	TTAA	2 cut(s)	1353, 1488
MslI	CAYNNNNRTG	1 cut(s)	1444
Msp20I	TGGCCA	1 cut(s)	1577
MspI	CCGG	1 cut(s)	301
MspR9I	CCNGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
Mva1269I	GAATGC	1 cut(s)	1687
MvaI	CCWGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
MwoI	GCNNNNNNNGC	4 cut(s)	1085, 1094, 1559, 1574
NcoI	CCATGG	4 cut(s)	209, 601, 843, 960
NdeII	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
NheI	GCTAGC	1 cut(s)	1097
NlaIV	GGNNCC	3 cut(s)	305, 666, 930
NmeAIII	GCCGAG	1 cut(s)	432
NmuCI	GTSAC	1 cut(s)	1280
NsiI	ATGCAT	2 cut(s)	718, 1223
NspI	RCATGY	4 cut(s)	351, 716, 1221, 1776
PaeI	GCATGC	2 cut(s)	351, 716
PciSI	GCTCTTC	1 cut(s)	534
PcsI	WCGNNNNNNNCGW	1 cut(s)	379
PctI	GAATGC	1 cut(s)	1687
PfeI	GAWTC	7 cut(s)	815, 1139, 1225, 1316, 1401, 1499, 1784
PfoI	TCCNGGA	2 cut(s)	456, 1404
PkrI	GCNGC	3 cut(s)	424, 770, 1087
Ple19I	CGATCG	1 cut(s)	337
PleI	GAGTC	6 cut(s)	686, 930, 1204, 1246, 1389, 1612
PpsI	GAGTC	6 cut(s)	686, 930, 1204, 1246, 1389, 1612
PpuMI	RGGWCCY	1 cut(s)	928
Psp5II	RGGWCCY	1 cut(s)	928
Psp6I	CCWGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
PspEI	GGTNACC	1 cut(s)	836
PspGI	CCWGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
PspN4I	GGNNCC	3 cut(s)	305, 666, 930
PspPI	GGNCC	3 cut(s)	454, 593, 928
PspPPI	RGGWCCY	1 cut(s)	928
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	505
PsuI	RGATCY	2 cut(s)	292, 955
PvuI	CGATCG	1 cut(s)	337
RsaI	GTAC	3 cut(s)	634, 1246, 1296
RsaNI	GTAC	3 cut(s)	633, 1245, 1295
RseI	CAYNNNNRTG	1 cut(s)	1444
SapI	GCTCTTC	1 cut(s)	534
SaqAI	TTAA	2 cut(s)	1353, 1488
SatI	GCNGC	3 cut(s)	423, 769, 1086
Sau3AI	GATC	8 cut(s)	177, 292, 334, 955, 1036, 1116, 1366, 1767
Sau96I	GGNCC	3 cut(s)	454, 593, 928
SchI	GAGTC	6 cut(s)	686, 931, 1205, 1246, 1389, 1612
ScrFI	CCNGG	6 cut(s)	308, 458, 578, 640, 1029, 1406
SfaNI	GCATC	6 cut(s)	123, 277, 463, 917, 1165, 1458
SfcI	CTRYAG	1 cut(s)	420
SinI	GGWCC	3 cut(s)	454, 593, 928
SmiMI	CAYNNNNRTG	1 cut(s)	1444
SmlI	CTYRAG	2 cut(s)	263, 438
SmoI	CTYRAG	2 cut(s)	263, 438
SphI	GCATGC	2 cut(s)	351, 716
Sse9I	AATT	7 cut(s)	367, 730, 1374, 1481, 1599, 1666, 1740
SsiI	CCGC	4 cut(s)	290, 1086, 1504, 1673
SspI	AATATT	1 cut(s)	1690
SspMI	CTAG	7 cut(s)	137, 656, 1098, 1262, 1625, 1707, 1764
StyD4I	CCNGG	6 cut(s)	306, 456, 576, 638, 1027, 1404
StyI	CCWWGG	5 cut(s)	209, 601, 655, 843, 960
TaaI	ACNGT	5 cut(s)	26, 554, 624, 1286, 1714
TaqI	TCGA	3 cut(s)	337, 1035, 1652
TaqII	GACCGA	2 cut(s)	140, 1376
TasI	AATT	7 cut(s)	367, 730, 1374, 1481, 1599, 1666, 1740
TatI	WGTACW	2 cut(s)	1244, 1294
TauI	GCSGC	1 cut(s)	1088
TfiI	GAWTC	7 cut(s)	815, 1139, 1225, 1316, 1401, 1499, 1784
Tru1I	TTAA	2 cut(s)	1353, 1488
Tru9I	TTAA	2 cut(s)	1353, 1488
TscAI	CASTG	4 cut(s)	424, 510, 1539, 1585
TseFI	GTSAC	1 cut(s)	1280
TseI	GCWGC	2 cut(s)	422, 768
Tsp45I	GTSAC	1 cut(s)	1280
TspDTI	ATGAA	4 cut(s)	758, 890, 1238, 1346
TspRI	CASTG	4 cut(s)	424, 510, 1539, 1585
VpaK11BI	GGWCC	3 cut(s)	454, 593, 928
XapI	RAATTY	4 cut(s)	367, 730, 1481, 1666
XceI	RCATGY	4 cut(s)	351, 716, 1221, 1776
XmaJI	CCTAGG	1 cut(s)	655
XmiI	GTMKAC	2 cut(s)	759, 826
XspI	CTAG	7 cut(s)	137, 656, 1098, 1262, 1625, 1707, 1764
Zsp2I	ATGCAT	2 cut(s)	718, 1223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.