Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0017141

Physical Location & Seq

Genomic Coordinates Forward (+)

12373835 .. 12376198

Gene Structure 2364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGTCCAGCCTTCCCCACACCACCCTAGCCCTCCCTCCCCACCCGAACCCGTACCCTAACACACCCGCAACCCTCTCCACCGCCGTATCCTCCGCCAGAAGCCTCACCCACCTCAAACAAGTCCACGCTCAAATCCTAAAATCCAACCTCGACCGCCCCGACTCCCTCCTTTGCAATCTCCTCCTCTCCTCCTGCACCCTCTCGCTGAGCCTCCACTACCCTCTTTCCATCTTCAACCAAATCCCCAAACCCCAAATCCATCTGTGCAACAAGCTCCTGCGCGAGTTCTCACGATGCGCTGAGCCCGATAAGGCCCTTTTGGTGTATGAGAGGATGAGGAGGGAGGATGTGGGGGTGGACAGGTTCAGCATTCCGCCGCTGCTGAAGGCGGTGGCCAGAGCTTCGGCTTTGAGTGAAGGGATGGAGATTCACGGTGTAGCTTGGAAGTTGGGTTTTCATTCGGACCCGTTTGTGGAGACCGGGTTGGTCAGAATGTATGCCGCTTGTGGGAGGATCATGGATGCACGGTTGGTGTTTGATAAAATGTCTCGCAGAGATGTGGTTGCCTGGAGTATTATGATTAACGGGTACTGTCAGAGTGGCCATTTCGACACTGCATTCCGCTTGTTTGAAGAGATGAAGAACTCTAATGCGGAGCCAGATCCAGATGAGATGATACTTTCTGCCATTCTTTCAGCTTGTGGTCATGCTGGAAAGTTGGCTTATGGGAAAGCAATCCATGACTTCATTATGGAGAATGATATTGTGGTTGACTCTCATTTACGGAGCGCACTTATCGCCATGTATGCAGGTAGTGGCTCTATGGACTTGGCTCAGCAGTTGTTTGACAAGACATCACAAAAAAATTTCGTAGTTGCAACCGCAATGGTTTCTGGGTATTCAAAACTGGGACGGGTTGAAGATGCACGTTTGATTTTTGACCAAATTGTTGAGAAGGACTTGGTCTGCTGGAGCGCCATGATATCTGGTTATGCAGAAAGTGATCGACCTCAAGAGGCTCTTAGATTGTTTGCTGAAATGGAAGCTTCGGGGTTAAGACCTGATCCAGTGACCATGTTGAGTGTCATTTCAGCTTGCGGTCATCTTGGTGCACTGGATCAAGCTAAGTGGGTTCATTTATATGTTGACAAGAATGGATTTGGCAGAGTTTTGTCTGTCAACAATGCGCTGATTGATATGTATGCCAAATGCGGGAACCTGGAAAAAGCAACAGAGGTGTTTGAGAACATGAGAAGAAGAAATGTGATATCTTGGACCACTATGATTAGCGCCTTTGCGATACATGGGGAGGCTAGTAATGCACTAAACTTCTTCAATCAAATGAAAGATGAAAATTTTGAGCCAAATGGGGTTACATTTGTGGGCGTGCTTTATGCTTGTAGCCATATGGGGTTAGTTGAGGAGGGTAGAAGAGTCTTTGAATCGATGATTGATGAATACAACATCACTCCGAAACATGAGCACTATGGATGCATGGTTGACCTCTTTGGTCGTGCCGGTCTTTTGAGAGAAGCTCTTGAGGTTATAGAGGCAATGCCCTTTGCACCGAATGTTGTCATTTGGGGATCTTTGATGGCTGCTTGTCAGATTCATGGTGAGACTGAATTAGGAGAATATGCTGCAAGACAGCTTCTTGAGCTGGAACCAGACCATGATGGAGCCCTTGTGGCGTTATCAAACATTTACGCAAAACAAGGAAGATGGGAAGATGTTGGCATTGTGAGGAAAACAATGAAAAGCAGTGGTATATCTAAGGAGAGGGGGTATAGCAGGATAGAACTAAACAACGAGGTACACGAGTTTTTAATGGCAGATAGAAATCATAAACAAGCAGATCAGATCTATGAAAAATTAGATGAGGTAGTTAGTGAGGTGAAGCGGGTTGGTTATACTCCCAACACGAGTTGCGTTTTGTTTGATTTAGAAGAGGAAGAAAAGAAGGAAGCGATTCTCTTGCACAGTGAGAAGTTGGCTCTTTCTTACGGTTTGATAAGTAAGAAGCAAGGTTCAAGCATTCACATAGTTAAGAATCTCCGGATTTGCGAAGACTGCCATACTTTCATGAAGTTGGCTTCAAAGGTGTATGAGAGAGAGATTATTGTCAGAGATAGGACTAGGTTTCATCACTACAAACATGGTTTATGCTCTTGTAAAGACTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

729

Amino Acids

81.79

Weight (kDa)

6.12

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	185 - 221	5.3e-12	PPR repeat family
PPR_1	PF12854	186 - 214	3e-10	PPR repeat
PPR	PF01535	188 - 216	6.5e-09	PPR repeat
PPR_2	PF13041	320 - 367	4.3e-10	PPR repeat family
PPR	PF01535	322 - 352	5.8e-07	PPR repeat
PPR	PF01535	395 - 422	3.5e-06	PPR repeat
PPR_2	PF13041	420 - 468	3.2e-10	PPR repeat family
E_motif	PF20431	538 - 600	2e-20	E motif
DYW_deaminase	PF14432	636 - 728	1.4e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14820
fragaria_vesca	FvH4_4g16280
malus_domestica	MD16G1195600.v1.1
prunus_persica	Prupe.1G015600_v2.0.a1
pyrus_communis	pycom16g16480
rosa_chinensis	RchiOBHm_Chr4g0415871
rosa_laevigata	RLG00000008032
rosa_multiflora	Rmu_co8517385.1_g000001 Rmu_sc0002438.1_g000005
rosa_rugosa	Rorug04G0137100
rosa_samantha	Rh4BG196800 Rh4CG209900
rosa_wichuraiana	Rw4G016860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	800
AccII	CGCG	1 cut(s)	282
AccIII	TCCGGA	1 cut(s)	2055
AclWI	GGATC	5 cut(s)	521, 656, 1058, 1125, 1594
AcoI	YGGCCR	2 cut(s)	393, 601
AcsI	RAATTY	2 cut(s)	865, 1354
AcuI	CTGAAG	1 cut(s)	404
AfaI	GTAC	3 cut(s)	53, 590, 1815
AfiI	CCNNNNNNNGG	3 cut(s)	472, 507, 1212
AgsI	TTSAA	8 cut(s)	235, 632, 903, 920, 1336, 1442, 2031, 2097
AjnI	CCWGG	2 cut(s)	566, 1218
Alw21I	GWGCWC	2 cut(s)	1114, 1485
Alw26I	GTCTC	3 cut(s)	470, 552, 1613
Alw44I	GTGCAC	1 cut(s)	1110
AlwI	GGATC	5 cut(s)	521, 656, 1058, 1125, 1594
Aor13HI	TCCGGA	1 cut(s)	2055
AoxI	GGCC	3 cut(s)	312, 393, 601
ApaLI	GTGCAC	1 cut(s)	1110
ApeKI	GCWGC	3 cut(s)	379, 1598, 1640
ApoI	RAATTY	2 cut(s)	865, 1354
Asp700I	GAANNNNTTC	1 cut(s)	1968
AspLEI	GCGC	6 cut(s)	282, 299, 791, 977, 1189, 1292
AspS9I	GGNCC	3 cut(s)	313, 463, 1275
AsuC2I	CCSGG	1 cut(s)	481
AsuHPI	GGTGA	3 cut(s)	97, 1628, 1906
AvaII	GGWCC	2 cut(s)	463, 1275
BaeGI	GKGCMC	1 cut(s)	1114
BaeI	ACNNNNGTAYC	4 cut(s)	69, 102, 1805, 1838
BalI	TGGCCA	2 cut(s)	395, 603
BanII	GRGCYC	2 cut(s)	306, 1684
BauI	CACGAG	2 cut(s)	1817, 1921
BbsI	GAAGAC	1 cut(s)	2073
Bbv12I	GWGCWC	2 cut(s)	1114, 1485
BbvI	GCAGC	3 cut(s)	366, 1585, 1627
BccI	CCATC	6 cut(s)	236, 267, 415, 1588, 1670, 1716
BceAI	ACGGC	1 cut(s)	68
BcgI	CGANNNNNNTGC	2 cut(s)	1957, 1991
BciT130I	CCWGG	2 cut(s)	568, 1220
BciVI	GTATCC	1 cut(s)	97
BcnI	CCSGG	1 cut(s)	481
BcoDI	GTCTC	3 cut(s)	470, 552, 1613
BfaI	CTAG	3 cut(s)	26, 1314, 2136
BfoI	RGCGCY	2 cut(s)	978, 1293
BfuAI	ACCTGC	1 cut(s)	800
BfuI	GTATCC	1 cut(s)	97
BglI	GCCNNNNNGGC	1 cut(s)	1688
BglII	AGATCT	1 cut(s)	1860
BisI	GCNGC	5 cut(s)	377, 380, 501, 1599, 1641
BlpI	GCTNAGC	3 cut(s)	206, 300, 834
BlsI	GCNGC	5 cut(s)	378, 381, 502, 1600, 1642
Bme1390I	CCNGG	3 cut(s)	481, 568, 1220
Bme18I	GGWCC	2 cut(s)	463, 1275
BmgT120I	GGNCC	3 cut(s)	313, 463, 1275
BmiI	GGNNCC	5 cut(s)	465, 657, 1217, 1665, 1681
BmrFI	CCNGG	3 cut(s)	481, 568, 1220
BmrI	ACTGGG	1 cut(s)	917
BmsI	GCATC	4 cut(s)	284, 511, 913, 1481
BmuI	ACTGGG	1 cut(s)	917
BpiI	GAAGAC	1 cut(s)	2073
BplI	GAGNNNNNCTC	2 cut(s)	1519, 1551
BpmI	CTGGAG	2 cut(s)	589, 991
Bpu1102I	GCTNAGC	3 cut(s)	206, 300, 834
BpuEI	CTTGAG	3 cut(s)	996, 1559, 1676
BpuMI	CCSGG	1 cut(s)	481
Bsa29I	ATCGAT	1 cut(s)	1445
BsaBI	GATNNNNATC	1 cut(s)	1839
BsaI	GGTCTC	1 cut(s)	470
BsaWI	WCCGGW	1 cut(s)	2055
BsaXI	ACNNNNNCTCC	6 cut(s)	467, 497, 1671, 1701, 1769, 1799
Bsc4I	CCNNNNNNNGG	3 cut(s)	472, 507, 1212
Bse118I	RCCGGY	1 cut(s)	1517
Bse1I	ACTGG	3 cut(s)	912, 1067, 1119
Bse3DI	GCAATG	2 cut(s)	891, 1560
Bse8I	GATNNNNATC	1 cut(s)	1839
BseAI	TCCGGA	1 cut(s)	2055
BseBI	CCWGG	2 cut(s)	568, 1220
BseCI	ATCGAT	1 cut(s)	1445
BseGI	GGATG	5 cut(s)	339, 352, 426, 526, 1496
BseJI	GATNNNNATC	1 cut(s)	1839
BseLI	CCNNNNNNNGG	3 cut(s)	472, 507, 1212
BseMI	GCAATG	2 cut(s)	891, 1560
BseMII	CTCAG	3 cut(s)	197, 291, 848
BseNI	ACTGG	3 cut(s)	912, 1067, 1119
BseRI	GAGGAG	5 cut(s)	170, 173, 178, 352, 1436
BseSI	GKGCMC	1 cut(s)	1114
BseXI	GCAGC	3 cut(s)	366, 1585, 1627
BsgI	GTGCAG	1 cut(s)	178
Bsh1236I	CGCG	1 cut(s)	282
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	3 cut(s)	314, 395, 603
BshVI	ATCGAT	1 cut(s)	1445
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	2 cut(s)	1114, 1485
BsiSI	CCGG	3 cut(s)	480, 1518, 2056
BslFI	GGGAC	1 cut(s)	924
BslI	CCNNNNNNNGG	3 cut(s)	472, 507, 1212
BsmAI	GTCTC	3 cut(s)	470, 552, 1613
BsmFI	GGGAC	1 cut(s)	924
BsmI	GAATGC	3 cut(s)	369, 617, 2034
BsnI	GGCC	3 cut(s)	314, 395, 603
Bso31I	GGTCTC	1 cut(s)	470
Bsp1286I	GDGCHC	4 cut(s)	306, 1114, 1485, 1684
Bsp13I	TCCGGA	1 cut(s)	2055
Bsp143I	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
Bsp1720I	GCTNAGC	3 cut(s)	206, 300, 834
BspANI	GGCC	3 cut(s)	314, 395, 603
BspCNI	CTCAG	3 cut(s)	198, 292, 847
BspDI	ATCGAT	1 cut(s)	1445
BspEI	TCCGGA	1 cut(s)	2055
BspFNI	CGCG	1 cut(s)	282
BspHI	TCATGA	1 cut(s)	2082
BspLI	GGNNCC	5 cut(s)	465, 657, 1217, 1665, 1681
BspMI	ACCTGC	1 cut(s)	800
BspPI	GGATC	5 cut(s)	521, 656, 1058, 1125, 1594
BspTNI	GGTCTC	1 cut(s)	470
BsrDI	GCAATG	2 cut(s)	891, 1560
BsrFI	RCCGGY	1 cut(s)	1517
BsrI	ACTGG	3 cut(s)	912, 1067, 1119
BssAI	RCCGGY	1 cut(s)	1517
BssMI	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
BssSI	CACGAG	2 cut(s)	1817, 1921
Bst2BI	CACGAG	2 cut(s)	1817, 1921
Bst2UI	CCWGG	2 cut(s)	568, 1220
Bst4CI	ACNGT	5 cut(s)	434, 528, 593, 1982, 2006
Bst6I	CTCTTC	3 cut(s)	627, 1426, 1941
BstC8I	GCNNGC	2 cut(s)	1096, 1388
BstDEI	CTNAG	6 cut(s)	206, 300, 834, 1022, 1125, 1773
BstF5I	GGATG	5 cut(s)	339, 352, 426, 526, 1496
BstFNI	CGCG	1 cut(s)	282
BstH2I	RGCGCY	2 cut(s)	978, 1293
BstHHI	GCGC	6 cut(s)	282, 299, 791, 977, 1189, 1292
BstKTI	GATC	8 cut(s)	516, 664, 1006, 1066, 1120, 1589, 1858, 1863
BstMAI	GTCTC	3 cut(s)	470, 552, 1613
BstMBI	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	6 cut(s)	797, 806, 1319, 1657, 1688, 2070
BstNI	CCWGG	2 cut(s)	568, 1220
BstSCI	CCNGG	3 cut(s)	479, 566, 1218
BstSLI	GKGCMC	1 cut(s)	1114
BstUI	CGCG	1 cut(s)	282
BstV1I	GCAGC	3 cut(s)	366, 1585, 1627
BstV2I	GAAGAC	1 cut(s)	2073
BstX2I	RGATCY	3 cut(s)	661, 1586, 1860
BstYI	RGATCY	3 cut(s)	661, 1586, 1860
Bsu15I	ATCGAT	1 cut(s)	1445
BsuI	GTATCC	1 cut(s)	97
BsuRI	GGCC	3 cut(s)	314, 395, 603
BsuTUI	ATCGAT	1 cut(s)	1445
BtsCI	GGATG	5 cut(s)	339, 352, 426, 526, 1496
BtsI	GCAGTG	2 cut(s)	612, 1768
BtsIMutI	CAGTG	5 cut(s)	612, 1074, 1112, 1768, 1987
BveI	ACCTGC	1 cut(s)	800
Cac8I	GCNNGC	2 cut(s)	1096, 1388
CciI	TCATGA	1 cut(s)	2082
CfoI	GCGC	6 cut(s)	282, 299, 791, 977, 1189, 1292
Cfr10I	RCCGGY	1 cut(s)	1517
Cfr13I	GGNCC	3 cut(s)	313, 463, 1275
ClaI	ATCGAT	1 cut(s)	1445
Csp6I	GTAC	3 cut(s)	52, 589, 1814
CspCI	CAANNNNNGTGG	2 cut(s)	1109, 1144
CviQI	GTAC	3 cut(s)	52, 589, 1814
DdeI	CTNAG	6 cut(s)	206, 300, 834, 1022, 1125, 1773
DpnI	GATC	8 cut(s)	515, 663, 1005, 1065, 1119, 1588, 1857, 1862
DpnII	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
EaeI	YGGCCR	2 cut(s)	393, 601
Eam1104I	CTCTTC	3 cut(s)	627, 1426, 1941
EarI	CTCTTC	3 cut(s)	627, 1426, 1941
EciI	GGCGGA	2 cut(s)	82, 363
Eco24I	GRGCYC	2 cut(s)	306, 1684
Eco31I	GGTCTC	1 cut(s)	470
Eco32I	GATATC	2 cut(s)	984, 1269
Eco47I	GGWCC	2 cut(s)	463, 1275
Eco57I	CTGAAG	1 cut(s)	404
EcoO109I	RGGNCCY	1 cut(s)	313
EcoRII	CCWGG	2 cut(s)	566, 1218
EcoRV	GATATC	2 cut(s)	984, 1269
EcoT22I	ATGCAT	1 cut(s)	1496
EcoT38I	GRGCYC	2 cut(s)	306, 1684
FalI	AAGNNNNNCTT	2 cut(s)	1005, 1037
FaqI	GGGAC	1 cut(s)	924
FauI	CCCGC	3 cut(s)	73, 1205, 1893
FauNDI	CATATG	1 cut(s)	1407
Fnu4HI	GCNGC	5 cut(s)	377, 380, 501, 1599, 1641
FokI	GGATG	5 cut(s)	346, 359, 433, 533, 1503
FriOI	GRGCYC	2 cut(s)	306, 1684
Fsp4HI	GCNGC	5 cut(s)	377, 380, 501, 1599, 1641
FspBI	CTAG	3 cut(s)	26, 1314, 2136
GlaI	GCGC	6 cut(s)	281, 298, 790, 976, 1188, 1291
GluI	GCNGC	5 cut(s)	377, 380, 501, 1599, 1641
GsuI	CTGGAG	2 cut(s)	589, 991
HaeII	RGCGCY	2 cut(s)	978, 1293
HaeIII	GGCC	3 cut(s)	314, 395, 603
HapII	CCGG	3 cut(s)	480, 1518, 2056
HhaI	GCGC	6 cut(s)	282, 299, 791, 977, 1189, 1292
Hin6I	GCGC	6 cut(s)	280, 297, 789, 975, 1187, 1290
HinP1I	GCGC	6 cut(s)	280, 297, 789, 975, 1187, 1290
HincII	GTYRAC	4 cut(s)	772, 1147, 1180, 1501
HindII	GTYRAC	4 cut(s)	772, 1147, 1180, 1501
HindIII	AAGCTT	1 cut(s)	1044
HinfI	GANTC	8 cut(s)	161, 427, 773, 1434, 1442, 1609, 1969, 2050
HpaII	CCGG	3 cut(s)	480, 1518, 2056
HphI	GGTGA	3 cut(s)	97, 1628, 1906
Hpy166II	GTNNAC	8 cut(s)	124, 358, 772, 1112, 1147, 1180, 1501, 1816
Hpy188I	TCNGA	7 cut(s)	463, 491, 597, 1473, 1608, 1860, 2126
Hpy188III	TCNNGA	7 cut(s)	291, 665, 1013, 1538, 1655, 2056, 2083
Hpy8I	GTNNAC	8 cut(s)	124, 358, 772, 1112, 1147, 1180, 1501, 1816
HpyAV	CCTTC	5 cut(s)	20, 379, 410, 949, 1954
HpyCH4III	ACNGT	5 cut(s)	434, 528, 593, 1982, 2006
HpyCH4IV	ACGT	1 cut(s)	928
HpyF10VI	GCNNNNNNNGC	6 cut(s)	797, 806, 1319, 1657, 1688, 2070
HpyF3I	CTNAG	6 cut(s)	206, 300, 834, 1022, 1125, 1773
HpySE526I	ACGT	1 cut(s)	928
HspAI	GCGC	6 cut(s)	280, 297, 789, 975, 1187, 1290
Kpn2I	TCCGGA	1 cut(s)	2055
Kzo9I	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
LmnI	GCTCC	5 cut(s)	279, 655, 786, 972, 1679
Lsp1109I	GCAGC	3 cut(s)	366, 1585, 1627
LweI	GCATC	4 cut(s)	284, 511, 913, 1481
MaeI	CTAG	3 cut(s)	26, 1314, 2136
MaeII	ACGT	1 cut(s)	928
MaeIII	GTNAC	2 cut(s)	1069, 1372
MalI	GATC	8 cut(s)	515, 663, 1005, 1065, 1119, 1588, 1857, 1862
MboI	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
MflI	RGATCY	3 cut(s)	661, 1586, 1860
MhlI	GDGCHC	4 cut(s)	306, 1114, 1485, 1684
MlsI	TGGCCA	2 cut(s)	395, 603
MluCI	AATT	5 cut(s)	865, 945, 1354, 1625, 1871
MluNI	TGGCCA	2 cut(s)	395, 603
MlyI	GAGTC	3 cut(s)	155, 767, 1443
MmeI	TCCRAC	1 cut(s)	168
Mox20I	TGGCCA	2 cut(s)	395, 603
Mph1103I	ATGCAT	1 cut(s)	1496
MroI	TCCGGA	1 cut(s)	2055
MroXI	GAANNNNTTC	1 cut(s)	1968
MscI	TGGCCA	2 cut(s)	395, 603
MseI	TTAA	4 cut(s)	582, 1055, 1826, 2046
MslI	CAYNNNNRTG	2 cut(s)	1107, 1140
Msp20I	TGGCCA	2 cut(s)	395, 603
MspA1I	CMGCKG	1 cut(s)	379
MspI	CCGG	3 cut(s)	480, 1518, 2056
MspR9I	CCNGG	3 cut(s)	481, 568, 1220
Mva1269I	GAATGC	3 cut(s)	369, 617, 2034
MvaI	CCWGG	2 cut(s)	568, 1220
MvnI	CGCG	1 cut(s)	282
MwoI	GCNNNNNNNGC	6 cut(s)	797, 806, 1319, 1657, 1688, 2070
NciI	CCSGG	1 cut(s)	481
NdeI	CATATG	1 cut(s)	1407
NdeII	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
NlaIV	GGNNCC	5 cut(s)	465, 657, 1217, 1665, 1681
NmuCI	GTSAC	1 cut(s)	1069
NsiI	ATGCAT	1 cut(s)	1496
PagI	TCATGA	1 cut(s)	2082
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 1815
PctI	GAATGC	3 cut(s)	369, 617, 2034
PdmI	GAANNNNTTC	1 cut(s)	1968
PfeI	GAWTC	5 cut(s)	427, 1442, 1609, 1969, 2050
PflFI	GACNNNGTC	1 cut(s)	962
PkrI	GCNGC	5 cut(s)	378, 381, 502, 1600, 1642
PleI	GAGTC	3 cut(s)	155, 767, 1442
PpsI	GAGTC	3 cut(s)	155, 767, 1442
Psp6I	CCWGG	2 cut(s)	566, 1218
PspGI	CCWGG	2 cut(s)	566, 1218
PspN4I	GGNNCC	5 cut(s)	465, 657, 1217, 1665, 1681
PspPI	GGNCC	3 cut(s)	313, 463, 1275
PsuI	RGATCY	3 cut(s)	661, 1586, 1860
PsyI	GACNNNGTC	1 cut(s)	962
RsaI	GTAC	3 cut(s)	53, 590, 1815
RsaNI	GTAC	3 cut(s)	52, 589, 1814
RseI	CAYNNNNRTG	2 cut(s)	1107, 1140
SaqAI	TTAA	4 cut(s)	582, 1055, 1826, 2046
SatI	GCNGC	5 cut(s)	377, 380, 501, 1599, 1641
Sau3AI	GATC	8 cut(s)	513, 661, 1003, 1063, 1117, 1586, 1855, 1860
Sau96I	GGNCC	3 cut(s)	313, 463, 1275
SchI	GAGTC	3 cut(s)	155, 767, 1443
ScrFI	CCNGG	3 cut(s)	481, 568, 1220
SduI	GDGCHC	4 cut(s)	306, 1114, 1485, 1684
SfaNI	GCATC	4 cut(s)	284, 511, 913, 1481
SinI	GGWCC	2 cut(s)	463, 1275
SmiMI	CAYNNNNRTG	2 cut(s)	1107, 1140
SmlI	CTYRAG	3 cut(s)	1011, 1538, 1655
SmoI	CTYRAG	3 cut(s)	1011, 1538, 1655
Sse9I	AATT	5 cut(s)	865, 945, 1354, 1625, 1871
SspMI	CTAG	3 cut(s)	26, 1314, 2136
StyD4I	CCNGG	3 cut(s)	479, 566, 1218
TaaI	ACNGT	5 cut(s)	434, 528, 593, 1982, 2006
TaiI	ACGT	1 cut(s)	931
TaqI	TCGA	4 cut(s)	150, 609, 1006, 1445
TasI	AATT	5 cut(s)	865, 945, 1354, 1625, 1871
TauI	GCSGC	2 cut(s)	379, 503
TfiI	GAWTC	5 cut(s)	427, 1442, 1609, 1969, 2050
Tru1I	TTAA	4 cut(s)	582, 1055, 1826, 2046
Tru9I	TTAA	4 cut(s)	582, 1055, 1826, 2046
TscAI	CASTG	5 cut(s)	619, 1074, 1119, 1768, 1987
TseFI	GTSAC	1 cut(s)	1069
TseI	GCWGC	3 cut(s)	379, 1598, 1640
Tsp45I	GTSAC	1 cut(s)	1069
TspGWI	ACGGA	1 cut(s)	799
TspRI	CASTG	5 cut(s)	619, 1074, 1119, 1768, 1987
Tth111I	GACNNNGTC	1 cut(s)	962
VneI	GTGCAC	1 cut(s)	1110
VpaK11BI	GGWCC	2 cut(s)	463, 1275
XapI	RAATTY	2 cut(s)	865, 1354
XmnI	GAANNNNTTC	1 cut(s)	1968
XspI	CTAG	3 cut(s)	26, 1314, 2136
Zsp2I	ATGCAT	1 cut(s)	1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.