Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0020369

Physical Location & Seq

Genomic Coordinates Forward (+)

15496538 .. 15504805

Gene Structure 8268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4515 bp

ATGCGTGCACATGTACATGATAATTGTGGGATGATCGATCTGTACGAATTGATGATGACCAATGTTAATTTTGGTTTTACAGTAGCTACTAAATTCATCAATGAGTTAAAGGCAATTCCATTACAATTTAGTAAGAATGTAGAAAAATGGACCTATAGTACAAATCGCCAAATGATGTTGAACCTAGAAGACGCTCCTAGAAACTTGATTTCTCAATGTGAAACTTGTTCATTTCAGTGGAGAATTATATATATGCCCGAAGCATATCTCCATAAAAATTCCAAAGGAGAATGTGTCATGAAGTGTAGAAAATCCCTGAAGGATCCAAATTGCTTGAAAACAATGGATGGTATAAATTGCTTAGTGAGTACTTTCATTAAGAAATTGTTGCAACATAATAAATCTCTTGCAAGAGTTGATATTAGAATGGGACTCCTGAAGAGTGTACAAAAATTATGTAATGTAAAAAAGAATATTGTCTCAAGCTGTAAATCGAACATTATAACCATATGGATTGAAGAGTATGAAAAGATCATCCATCCTCGTGAGGGAAATGATGAATTGATATTTGGTTCAGAAGTACCATATCTTAGCGGAGCTTCATGTGAAGCACAATATCAACATATGGGTATTAGAATGAAGAAAATTTATCTATTGATATCTCCTAAAATTATCGACTTGTGCTTATTCTATTCCAAAGAACTCACTAATAGCCATGGTCTTATTGGGCAAAAAGGATTTGTATTTACATGTGGAAATAGATTGATCCTACAACGATCAAGGAAGCAACCATTCATTGCTACATCTTCTTATCTCTCAGAAATACATGTGTTTCCACCTTCAGAAATAAACACTCCAACTATCTTAATTCAAAATCAGGGGGAGCATCCAAAAGGAGGTGTGAATAATAAACAACCAAATATGACCGTAGCTTTACAATGTTGTCAGATAAAAAGTCTTGGTAAGATTGTTAGGTTGAAAAACGTGAAGGAGGTATTTGCATCATTGAAGAAAAAACACAAAAATAGAGAGAAAGATTTGGAGGAAAGGAAAGAAAAGAGGAAAGGAAGAGAGAAAAGAAAGAAGAGATGTTCAGGAGAAAATACCATTTGTACTCCTACTATTTTAGATAATGAAAGAAAGTACTACTGCTACCCTGAGGATATAGGCATACTTGCCGAACGTCATAAATATTGCATATTGTTTACTCTATATTCCATTTTTCATTTTTGTCTATGGTATTGGAAGAAATTTAAAAAGTTAAAGAAAAAATCTTTCTTCTTTGCAAGATCCTCATGTATTGTTTTATTAATAGGAAAAACAAGTTCGAACACGAAACTTGATTATGCATTCAGAAGAAAAGTATCGATTAACCAAAATCTAGTATTTACTCATCACATAAAAATGACTAACACAATAGCATTGCCCATATTCGTATACTCAATATCTTTCGCCGAAGGGGGGAACGCACATGTAGCCTCAAGCCCCATCTCTTGTAGTTGTGGAGGAGAGAGAAAGACAGATTTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGGACAAAAGTTTATGGGAGGGGGAGAGGGGAAGGGTAAGGGGATGATGATGAAGTGTGGTTGGACAAATCAAAGTCTCACATGTAAGGCACGAGGCCACCCAACTGACAATCAACTTGTGGGGACTTGTCTCTCGATTATATACACACACATATTATATATATATATATATAATTATCTACCATCCATGATTTTGGTCCTTCTGTTAAAAACTCTTTGGGTAATTTTTAAAGCTTCTGTAGAACAATATTATACCATTTGGAAGACCAATGGATGCTGCAGGTGGCTGGAAAATAGCCTGAAAGGTGACTGGTTTGAAGGAAAACTGGAAAACTCACCGAAAACTGGTGATTTAAAAATGAAAATCATACTTATCGATGAGATGAAGATAATGGTACCTTTCTTGACGGCTAAAGCGCTATGGTTTGGCAGGAAAATGGCTCGAAAATGGCTAACTATAAAATACGATAAAGGAACCAATATCTTCGTCTCATTGAGAAGTATGATTTTTGTTTTTGAATCACTCGATTTTCGAGGTTTCCAGTTTTTCCGCGAACCTGTCACCTTTCAGGCTATTTTCCGGCCATCTCCGATGACCATTGGGCTTCCAAATAGGTATAATCTTGTTCTACACTCTCCTATCTTCATTTTGATATATTATGTTGCCCAAAGAGTTTTTAACGGAATGACCAAAATCATGAATGGTGGACAATCTCAGGGACCATTTCTATTGATTTTGAATCTCAAGGACCATTTTGTATATTTAATATATATGTATTATATCCCAACTAACTTAATCATGAAAGGATTTCAAAGCAAAAGAGAGTTATTTCTTATCAGCCATATGCATGTCCTCTTACCCATAGATCATCAGACACATCATGTTATTAATTTTCACCAAAACTATAAACATGTACCTTGTGCTATAAAGTTGGCTTGTAAATTACTGAATTTTAAATTAACGAATTATATACCTCGACTCGTTGATTACATAATATACTATGTGTTTAATTTCTTCCTTTCACGATATCGCTCATCAAGGCACCACACTAAGTTTTTAAGTTTATACCTTATTGAAGCCGCCAAAAAAAATCTCATCCATCTCCCAATACATGTATTCCTTAATTTGTTAAACATTCTTCCCCCTCCCTCCCCCACCCCCCTCTCTCTCCCTTTCGCTCCCCACACGCGTGCATTGTACACATGCACATTCGTTCTTGAGCCACAAAAATATCCTCATTGCAACCGTGATTGCGAATGTTATTATTTAAGGGGGAGCAGAGTGCTAAAGGACAATTTGTTGATTGTACTAATATTGGCAGCAGCAGCAACAACAACAATGTCGATCTTGTCCATAATATTCCTCTACAGCAATAGCACCAACTCGAACTTTCTGAGGTTTTTCAGTTCTTTTGCTACTTCTTCACTCATCAGATCAAAACACAACAGAATCCAACTTCCTTTGGGAACTTTTGGGCTTCCATTTCTTGGTGAAACCATTGAGTTTGTAACTTGTGCTTACTCTGACTCCCCTGAGAGCTTCATGAACAAACGCTGCCACTTGTATGGGAAGGTGTTCAAGTCACACATATTTGGAAGTCCAACAATTGTATCAACAGATGCAGAAGTGAGTAAAATTGTTCTGCAGAGTGATGCAAAATCTTTTGTGCCATCTTACCCAAAATCTCTCACTGAGTTGATGGGGAAGTCTTCGATTTTGCTCATCAATGGAGCCCTGCAGAGAAGAATCCATGGACTCATTGGAGCCTTCTTTAAGTCCCCACATCTCAAAGCTCAAATCACCACAGGCATGCAGAACTCTGTCCAACAATCCATGGAAAATTGGAGAGATGACCATTTCATTTACATACAAGATGAAACCAAACATATTGCCTTTCAAGTACTTGTCAAGGCATTGATTAGTTTGGATCCTGGTGAAGACATGGAGTTCCTAAAGAAACAGTTCCAAGAATTCATTGCTGGCCTCATGTCTATCCCAATAAATATTCCTGGAAGTAGACTTTACAGATCATTACAGGCAAAGAAGAAAATGGTCAAGCTAGTACAGAAAATCATACAAGCGAGAAAAAAAGAGAGTGATATCATCTCCAATAAGGTTCCCAAAGATGTGGTAGATGTTCTGCTAAGTGACACAAGTGAGCAATTAACAGATAATCTGATAGCAGATAACATGATTGATATGATGATACCAGGGGAGGATTCAGTGCCACTTCTCATGACTATTGCAGTCAAATACCTCTCAGATTCCCCCACTGCTCTCCAACAATTAGCTGAGGAGAACACGAAGTTAAAAACTCAGAAAGATGAGCTTGGAGAGCCATTGTGTTGGAGTGATTACTTATCCTTACCATTTACGCAAAACGTGATCACAGAAACCCTAAGGATGGGAAACATCATAACTGGGGTGATGAGGAAGGCCATGAAAGATGTGGAGATAAAAGGGTATTTAATACCGAAGGGATGGTGTGTCTTCACATATTTTAGATCAGTTCATCTTGATCAGAATAACTATGATTGGCCTTATCACTTCAATCCATGGCGGTGGCAAGACAAAGATATGAGCAGCTGCAACTTCACTCCTTTTGGAGGTGGGCAAAGGCTGTGTCCTGGACTTGAATTAGCAAGGCTGGAAGCCTCCATTTTCTTACACCACTTTGTCACACAATTCAGAGGTCTATGTGGGGAGAGTGTTCAAAAAACGCTAGTTAGGCCTGTTGATCAATCGATTCGATTAACGGTGTGGCGGACATCTTACACCCGAGTTCAAACAAAAACTCGAGGGAAAATGATAGAATATATATGGCATTTTTTGGGATTTCCTCAGCCAGATGCAAACTTTTATGCTTTTTGGGAGAAATTGAACAAAGTTGTCTATGAGCAAAGACAATATTGCAGTCATCAAACTTTCTGGCACTTCCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009791 GO:0009908 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0016705 GO:0016709 GO:0022414 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048441 GO:0048443 GO:0048465 GO:0048466 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0090567 GO:0099402 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

1505

Amino Acids

174.26

Weight (kDa)

9.5

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	1013 - 1424	1e-51	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0020369)

Species	Orthologous Gene IDs
malus_domestica	MD03G1116600.v1.1
pyrus_communis	pycom07g12140 pycom08g18400 pycom13g27360 pycom13g27370 pycom17g18000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	503
AarI	CACCTGC	1 cut(s)	1842
Acc36I	ACCTGC	1 cut(s)	1842
Acc65I	GGTACC	1 cut(s)	1966
AccB1I	GGYRCC	2 cut(s)	1966, 2613
AccB7I	CCANNNNNTGG	1 cut(s)	3059
AccI	GTMKAC	2 cut(s)	1437, 3589
AccII	CGCG	2 cut(s)	2124, 2761
AciI	CCGC	5 cut(s)	594, 2122, 2652, 4132, 4336
AclWI	GGATC	6 cut(s)	317, 330, 760, 1284, 3494, 3507
AcoI	YGGCCR	1 cut(s)	2153
AcsI	RAATTY	6 cut(s)	92, 277, 645, 1250, 2521, 3542
AcuI	CTGAAG	3 cut(s)	338, 458, 825
AfeI	AGCGCT	1 cut(s)	1989
AfiI	CCNNNNNNNGG	7 cut(s)	548, 896, 1461, 1916, 3059, 3976, 4178
AflIII	ACRYGT	8 cut(s)	10, 749, 826, 1471, 1652, 2482, 2683, 2759
AjnI	CCWGG	4 cut(s)	3502, 3580, 3781, 4198
AjuI	GAANNNNNNNTTGG	2 cut(s)	552, 584
AleI	CACNNNNGTG	1 cut(s)	2760
Alw21I	GWGCWC	1 cut(s)	10
Alw26I	GTCTC	4 cut(s)	484, 1652, 1706, 2065
Alw44I	GTGCAC	1 cut(s)	6
AlwI	GGATC	6 cut(s)	317, 330, 760, 1284, 3494, 3507
Ama87I	CYCGRG	2 cut(s)	4350, 4368
Aor51HI	AGCGCT	1 cut(s)	1989
AoxI	GGCC	6 cut(s)	1666, 2153, 3553, 4008, 4109, 4301
ApaLI	GTGCAC	1 cut(s)	6
ApeKI	GCWGC	7 cut(s)	1848, 2891, 2894, 2897, 3126, 4155, 4158
ApoI	RAATTY	6 cut(s)	92, 277, 645, 1250, 2521, 3542
ArsI	GACNNNNNNTTYG	2 cut(s)	4180, 4212
AseI	ATTAAT	2 cut(s)	1310, 2460
Asp700I	GAANNNNTTC	2 cut(s)	3146, 3533
Asp718I	GGTACC	1 cut(s)	1966
AspLEI	GCGC	1 cut(s)	1990
AspS9I	GGNCC	4 cut(s)	150, 1768, 2291, 2320
AsuHPI	GGTGA	9 cut(s)	1889, 1899, 1931, 2125, 2459, 3074, 3364, 3518, 4009
AsuII	TTCGAA	1 cut(s)	1328
AvaI	CYCGRG	2 cut(s)	4350, 4368
AvaII	GGWCC	4 cut(s)	150, 1768, 2291, 2320
AxyI	CCTNAGG	2 cut(s)	1158, 3971
BaeGI	GKGCMC	1 cut(s)	10
BaeI	ACNNNNGTAYC	2 cut(s)	3165, 3198
BamHI	GGATCC	2 cut(s)	322, 3499
BanI	GGYRCC	2 cut(s)	1966, 2613
BanII	GRGCYC	1 cut(s)	3307
BauI	CACGAG	2 cut(s)	543, 1662
BbsI	GAAGAC	5 cut(s)	195, 1841, 3273, 3516, 4054
Bbv12I	GWGCWC	1 cut(s)	10
BbvCI	CCTCAGC	2 cut(s)	3864, 4413
BbvI	GCAGC	7 cut(s)	1835, 2903, 2906, 2909, 3113, 4145, 4167
BceAI	ACGGC	1 cut(s)	1995
BciT130I	CCWGG	4 cut(s)	3504, 3582, 3783, 4200
BclI	TGATCA	3 cut(s)	3957, 4090, 4309
BcoDI	GTCTC	4 cut(s)	484, 1652, 1706, 2065
BfaI	CTAG	5 cut(s)	185, 198, 1382, 3632, 4295
BfmI	CTRYAG	6 cut(s)	154, 1809, 1849, 2938, 3215, 3308
BfoI	RGCGCY	1 cut(s)	1991
BfuAI	ACCTGC	1 cut(s)	1842
BisI	GCNGC	8 cut(s)	1849, 2652, 2892, 2895, 2898, 3127, 4156, 4159
BlsI	GCNGC	8 cut(s)	1850, 2653, 2893, 2896, 2899, 3128, 4157, 4160
BmcAI	AGTACT	3 cut(s)	370, 1145, 3474
Bme1390I	CCNGG	4 cut(s)	3504, 3582, 3783, 4200
Bme18I	GGWCC	4 cut(s)	150, 1768, 2291, 2320
BmeT110I	CYCGRG	2 cut(s)	4350, 4368
BmgT120I	GGNCC	4 cut(s)	150, 1768, 2291, 2320
BmiI	GGNNCC	9 cut(s)	324, 1968, 2047, 2292, 2615, 3304, 3337, 3501, 3690
BmrFI	CCNGG	4 cut(s)	3504, 3582, 3783, 4200
BmrI	ACTGGG	1 cut(s)	4002
BmsI	GCATC	6 cut(s)	895, 1010, 1835, 3181, 3214, 4411
BmuI	ACTGGG	1 cut(s)	4002
BpiI	GAAGAC	5 cut(s)	195, 1841, 3273, 3516, 4054
Bpu10I	CCTNAGC	2 cut(s)	3864, 4413
Bpu14I	TTCGAA	1 cut(s)	1328
BpuEI	CTTGAG	4 cut(s)	466, 1465, 2300, 2810
Bsa29I	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
BsaJI	CCNNGG	5 cut(s)	715, 3322, 3405, 3782, 4127
BsaXI	ACNNNNNCTCC	4 cut(s)	279, 309, 3083, 3113
Bsc4I	CCNNNNNNNGG	7 cut(s)	548, 896, 1461, 1916, 3059, 3976, 4178
Bse1I	ACTGG	5 cut(s)	1886, 1902, 1921, 2113, 3997
Bse21I	CCTNAGG	2 cut(s)	1158, 3971
Bse3DI	GCAATG	4 cut(s)	795, 1421, 2809, 3546
BseBI	CCWGG	4 cut(s)	3504, 3582, 3783, 4200
BseCI	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
BseDI	CCNNGG	5 cut(s)	715, 3322, 3405, 3782, 4127
BseLI	CCNNNNNNNGG	7 cut(s)	548, 896, 1461, 1916, 3059, 3976, 4178
BseMI	GCAATG	4 cut(s)	795, 1421, 2809, 3546
BseNI	ACTGG	5 cut(s)	1886, 1902, 1921, 2113, 3997
BseRI	GAGGAG	2 cut(s)	1521, 3881
BseSI	GKGCMC	1 cut(s)	10
BseXI	GCAGC	7 cut(s)	1835, 2903, 2906, 2909, 3113, 4145, 4167
Bsh1236I	CGCG	2 cut(s)	2124, 2761
BshFI	GGCC	6 cut(s)	1668, 2155, 3555, 4010, 4111, 4303
BshNI	GGYRCC	2 cut(s)	1966, 2613
BshVI	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
BsiHKAI	GWGCWC	1 cut(s)	10
BsiHKCI	CYCGRG	2 cut(s)	4350, 4368
BsiSI	CCGG	1 cut(s)	2152
BslFI	GGGAC	4 cut(s)	444, 1708, 2304, 3334
BslI	CCNNNNNNNGG	7 cut(s)	548, 896, 1461, 1916, 3059, 3976, 4178
BsmAI	GTCTC	4 cut(s)	484, 1652, 1706, 2065
BsmBI	CGTCTC	1 cut(s)	2065
BsmFI	GGGAC	4 cut(s)	444, 1708, 2304, 3334
BsmI	GAATGC	1 cut(s)	1349
BsnI	GGCC	6 cut(s)	1668, 2155, 3555, 4010, 4111, 4303
BsoBI	CYCGRG	2 cut(s)	4350, 4368
Bsp119I	TTCGAA	1 cut(s)	1328
Bsp1286I	GDGCHC	2 cut(s)	10, 3307
Bsp1407I	TGTACA	3 cut(s)	13, 445, 2769
Bsp19I	CCATGG	4 cut(s)	715, 3322, 3405, 4127
BspACI	CCGC	5 cut(s)	594, 2122, 2652, 4132, 4336
BspANI	GGCC	6 cut(s)	1668, 2155, 3555, 4010, 4111, 4303
BspDI	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
BspFNI	CGCG	2 cut(s)	2124, 2761
BspHI	TCATGA	5 cut(s)	297, 2268, 2370, 3114, 3807
BspLI	GGNNCC	9 cut(s)	324, 1968, 2047, 2292, 2615, 3304, 3337, 3501, 3690
BspMAI	CTGCAG	3 cut(s)	1853, 3219, 3312
BspMI	ACCTGC	1 cut(s)	1842
BspPI	GGATC	6 cut(s)	317, 330, 760, 1284, 3494, 3507
BspT104I	TTCGAA	1 cut(s)	1328
BspT107I	GGYRCC	2 cut(s)	1966, 2613
BsrDI	GCAATG	4 cut(s)	795, 1421, 2809, 3546
BsrGI	TGTACA	3 cut(s)	13, 445, 2769
BsrI	ACTGG	5 cut(s)	1886, 1902, 1921, 2113, 3997
BssECI	CCNNGG	5 cut(s)	715, 3322, 3405, 3782, 4127
BssNAI	GTATAC	1 cut(s)	1438
BssSI	CACGAG	2 cut(s)	543, 1662
BssT1I	CCWWGG	4 cut(s)	715, 3322, 3405, 4127
Bst1107I	GTATAC	1 cut(s)	1438
Bst2BI	CACGAG	2 cut(s)	543, 1662
Bst2UI	CCWGG	4 cut(s)	3504, 3582, 3783, 4200
Bst4CI	ACNGT	5 cut(s)	82, 928, 2819, 3534, 4330
Bst6I	CTCTTC	4 cut(s)	434, 513, 1063, 1079
BstAUI	TGTACA	3 cut(s)	13, 445, 2769
BstBI	TTCGAA	1 cut(s)	1328
BstC8I	GCNNGC	4 cut(s)	6, 2763, 3383, 3553
BstDSI	CCRYGG	4 cut(s)	715, 3322, 3405, 4127
BstENI	CCTNNNNNAGG	1 cut(s)	4176
BstFNI	CGCG	2 cut(s)	2124, 2761
BstH2I	RGCGCY	1 cut(s)	1991
BstHHI	GCGC	1 cut(s)	1990
BstMAI	GTCTC	4 cut(s)	484, 1652, 1706, 2065
BstMWI	GCNNNNNNNGC	4 cut(s)	1475, 2897, 3907, 4300
BstNI	CCWGG	4 cut(s)	3504, 3582, 3783, 4200
BstSCI	CCNGG	4 cut(s)	3502, 3580, 3781, 4198
BstSFI	CTRYAG	6 cut(s)	154, 1809, 1849, 2938, 3215, 3308
BstSLI	GKGCMC	1 cut(s)	10
BstUI	CGCG	2 cut(s)	2124, 2761
BstV1I	GCAGC	7 cut(s)	1835, 2903, 2906, 2909, 3113, 4145, 4167
BstV2I	GAAGAC	5 cut(s)	195, 1841, 3273, 3516, 4054
BstX2I	RGATCY	3 cut(s)	322, 1289, 3499
BstXI	CCANNNNNNTGG	5 cut(s)	1765, 3137, 3700, 3918, 4134
BstYI	RGATCY	3 cut(s)	322, 1289, 3499
BstZ17I	GTATAC	1 cut(s)	1438
Bsu15I	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
Bsu36I	CCTNAGG	2 cut(s)	1158, 3971
BsuRI	GGCC	6 cut(s)	1668, 2155, 3555, 4010, 4111, 4303
BsuTUI	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
BtgI	CCRYGG	4 cut(s)	715, 3322, 3405, 4127
BtsI	GCAGTG	1 cut(s)	3843
BtsIMutI	CAGTG	5 cut(s)	242, 3261, 3801, 3843, 4510
BveI	ACCTGC	1 cut(s)	1842
Cac8I	GCNNGC	4 cut(s)	6, 2763, 3383, 3553
CciI	TCATGA	5 cut(s)	297, 2268, 2370, 3114, 3807
CfoI	GCGC	1 cut(s)	1990
Cfr13I	GGNCC	4 cut(s)	150, 1768, 2291, 2320
ClaI	ATCGAT	4 cut(s)	36, 1367, 1947, 4316
CseI	GACGC	1 cut(s)	200
DraI	TTTAAA	4 cut(s)	1255, 1801, 1926, 2527
EaeI	YGGCCR	1 cut(s)	2153
Eam1104I	CTCTTC	4 cut(s)	434, 513, 1063, 1079
EarI	CTCTTC	4 cut(s)	434, 513, 1063, 1079
EciI	GGCGGA	1 cut(s)	4351
Eco130I	CCWWGG	4 cut(s)	715, 3322, 3405, 4127
Eco147I	AGGCCT	1 cut(s)	4303
Eco24I	GRGCYC	1 cut(s)	3307
Eco32I	GATATC	3 cut(s)	660, 2600, 3673
Eco47I	GGWCC	4 cut(s)	150, 1768, 2291, 2320
Eco47III	AGCGCT	1 cut(s)	1989
Eco57I	CTGAAG	3 cut(s)	338, 458, 825
Eco81I	CCTNAGG	2 cut(s)	1158, 3971
Eco88I	CYCGRG	2 cut(s)	4350, 4368
EcoNI	CCTNNNNNAGG	1 cut(s)	4176
EcoRI	GAATTC	1 cut(s)	3542
EcoRII	CCWGG	4 cut(s)	3502, 3580, 3781, 4198
EcoRV	GATATC	3 cut(s)	660, 2600, 3673
EcoT14I	CCWWGG	4 cut(s)	715, 3322, 3405, 4127
EcoT22I	ATGCAT	2 cut(s)	1351, 2421
EcoT38I	GRGCYC	1 cut(s)	3307
ErhI	CCWWGG	4 cut(s)	715, 3322, 3405, 4127
Esp3I	CGTCTC	1 cut(s)	2065
FalI	AAGNNNNNCTT	2 cut(s)	3885, 3917
FaqI	GGGAC	4 cut(s)	444, 1708, 2304, 3334
FauNDI	CATATG	3 cut(s)	509, 624, 2415
FbaI	TGATCA	3 cut(s)	3957, 4090, 4309
FblI	GTMKAC	2 cut(s)	1437, 3589
Fnu4HI	GCNGC	8 cut(s)	1849, 2652, 2892, 2895, 2898, 3127, 4156, 4159
FriOI	GRGCYC	1 cut(s)	3307
Fsp4HI	GCNGC	8 cut(s)	1849, 2652, 2892, 2895, 2898, 3127, 4156, 4159
FspBI	CTAG	5 cut(s)	185, 198, 1382, 3632, 4295
GlaI	GCGC	1 cut(s)	1989
GluI	GCNGC	8 cut(s)	1849, 2652, 2892, 2895, 2898, 3127, 4156, 4159
HaeII	RGCGCY	1 cut(s)	1991
HaeIII	GGCC	6 cut(s)	1668, 2155, 3555, 4010, 4111, 4303
HapII	CCGG	1 cut(s)	2152
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	1 cut(s)	1990
Hin6I	GCGC	1 cut(s)	1988
HinP1I	GCGC	1 cut(s)	1988
HindIII	AAGCTT	1 cut(s)	1803
HpaII	CCGG	1 cut(s)	2152
HphI	GGTGA	9 cut(s)	1889, 1899, 1931, 2125, 2459, 3074, 3364, 3518, 4009
Hpy166II	GTNNAC	7 cut(s)	8, 446, 1206, 1438, 2279, 2772, 3590
Hpy8I	GTNNAC	7 cut(s)	8, 446, 1206, 1438, 2279, 2772, 3590
HpyCH4III	ACNGT	5 cut(s)	82, 928, 2819, 3534, 4330
HpyCH4IV	ACGT	3 cut(s)	984, 1183, 3954
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1475, 2897, 3907, 4300
HpySE526I	ACGT	3 cut(s)	984, 1183, 3954
HspAI	GCGC	1 cut(s)	1988
KpnI	GGTACC	1 cut(s)	1970
Ksp22I	TGATCA	3 cut(s)	3957, 4090, 4309
LmnI	GCTCC	7 cut(s)	199, 596, 883, 2755, 2847, 3302, 3335
Lsp1109I	GCAGC	7 cut(s)	1835, 2903, 2906, 2909, 3113, 4145, 4167
LweI	GCATC	6 cut(s)	895, 1010, 1835, 3181, 3214, 4411
MaeI	CTAG	5 cut(s)	185, 198, 1382, 3632, 4295
MaeII	ACGT	3 cut(s)	984, 1183, 3954
MaeIII	GTNAC	6 cut(s)	1877, 2131, 3079, 3153, 3719, 4249
MfeI	CAATTG	1 cut(s)	3177
MflI	RGATCY	3 cut(s)	322, 1289, 3499
MhlI	GDGCHC	2 cut(s)	10, 3307
MluI	ACGCGT	1 cut(s)	2759
MlyI	GAGTC	4 cut(s)	426, 2544, 3092, 3321
MmeI	TCCRAC	7 cut(s)	881, 1613, 3049, 3197, 3421, 3877, 3899
Mph1103I	ATGCAT	2 cut(s)	1351, 2421
MroXI	GAANNNNTTC	2 cut(s)	3146, 3533
MslI	CAYNNNNRTG	9 cut(s)	15, 235, 543, 1403, 2418, 2760, 3135, 3380, 4132
MspA1I	CMGCKG	1 cut(s)	4158
MspI	CCGG	1 cut(s)	2152
MspR9I	CCNGG	4 cut(s)	3504, 3582, 3783, 4200
MunI	CAATTG	1 cut(s)	3177
Mva1269I	GAATGC	1 cut(s)	1349
MvaI	CCWGG	4 cut(s)	3504, 3582, 3783, 4200
MvnI	CGCG	2 cut(s)	2124, 2761
MwoI	GCNNNNNNNGC	4 cut(s)	1475, 2897, 3907, 4300
NcoI	CCATGG	4 cut(s)	715, 3322, 3405, 4127
NdeI	CATATG	3 cut(s)	509, 624, 2415
NlaIV	GGNNCC	9 cut(s)	324, 1968, 2047, 2292, 2615, 3304, 3337, 3501, 3690
NmuCI	GTSAC	5 cut(s)	1877, 2131, 3153, 3719, 4249
NsiI	ATGCAT	2 cut(s)	1351, 2421
NspV	TTCGAA	1 cut(s)	1328
OliI	CACNNNNGTG	1 cut(s)	2760
PaeI	GCATGC	1 cut(s)	3385
PaeR7I	CTCGAG	1 cut(s)	4368
PagI	TCATGA	5 cut(s)	297, 2268, 2370, 3114, 3807
PaqCI	CACCTGC	1 cut(s)	1842
PceI	AGGCCT	1 cut(s)	4303
PciI	ACATGT	7 cut(s)	10, 749, 826, 1471, 1652, 2482, 2683
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	1 cut(s)	1349
PdmI	GAANNNNTTC	2 cut(s)	3146, 3533
PfeI	GAWTC	7 cut(s)	2090, 2311, 3021, 3318, 3791, 3836, 4318
PflMI	CCANNNNNTGG	1 cut(s)	3059
PfoI	TCCNGGA	2 cut(s)	3580, 4198
PkrI	GCNGC	8 cut(s)	1850, 2653, 2893, 2896, 2899, 3128, 4157, 4160
PleI	GAGTC	4 cut(s)	426, 2544, 3092, 3321
PpsI	GAGTC	4 cut(s)	426, 2544, 3092, 3321
PscI	ACATGT	7 cut(s)	10, 749, 826, 1471, 1652, 2482, 2683
PshBI	ATTAAT	2 cut(s)	1310, 2460
PsiI	TTATAA	1 cut(s)	503
Psp6I	CCWGG	4 cut(s)	3502, 3580, 3781, 4198
PspGI	CCWGG	4 cut(s)	3502, 3580, 3781, 4198
PspN4I	GGNNCC	9 cut(s)	324, 1968, 2047, 2292, 2615, 3304, 3337, 3501, 3690
PspPI	GGNCC	4 cut(s)	150, 1768, 2291, 2320
PspXI	VCTCGAGB	1 cut(s)	4368
PstI	CTGCAG	3 cut(s)	1853, 3219, 3312
PsuI	RGATCY	3 cut(s)	322, 1289, 3499
PvuII	CAGCTG	1 cut(s)	4158
RseI	CAYNNNNRTG	9 cut(s)	15, 235, 543, 1403, 2418, 2760, 3135, 3380, 4132
SatI	GCNGC	8 cut(s)	1849, 2652, 2892, 2895, 2898, 3127, 4156, 4159
Sau96I	GGNCC	4 cut(s)	150, 1768, 2291, 2320
ScaI	AGTACT	3 cut(s)	370, 1145, 3474
SchI	GAGTC	4 cut(s)	426, 2544, 3092, 3321
ScrFI	CCNGG	4 cut(s)	3504, 3582, 3783, 4200
SduI	GDGCHC	2 cut(s)	10, 3307
SfaNI	GCATC	6 cut(s)	895, 1010, 1835, 3181, 3214, 4411
SfcI	CTRYAG	6 cut(s)	154, 1809, 1849, 2938, 3215, 3308
Sfr274I	CTCGAG	1 cut(s)	4368
SfuI	TTCGAA	1 cut(s)	1328
SinI	GGWCC	4 cut(s)	150, 1768, 2291, 2320
SlaI	CTCGAG	1 cut(s)	4368
SmiMI	CAYNNNNRTG	9 cut(s)	15, 235, 543, 1403, 2418, 2760, 3135, 3380, 4132
SmlI	CTYRAG	5 cut(s)	481, 1480, 2315, 2789, 4368
SmoI	CTYRAG	5 cut(s)	481, 1480, 2315, 2789, 4368
SphI	GCATGC	1 cut(s)	3385
SseBI	AGGCCT	1 cut(s)	4303
SsiI	CCGC	5 cut(s)	594, 2122, 2652, 4132, 4336
SspI	AATATT	7 cut(s)	475, 1193, 1820, 2886, 2931, 3577, 4481
SspMI	CTAG	5 cut(s)	185, 198, 1382, 3632, 4295
StuI	AGGCCT	1 cut(s)	4303
StyD4I	CCNGG	4 cut(s)	3502, 3580, 3781, 4198
StyI	CCWWGG	4 cut(s)	715, 3322, 3405, 4127
TaaI	ACNGT	5 cut(s)	82, 928, 2819, 3534, 4330
TaiI	ACGT	3 cut(s)	987, 1186, 3957
TauI	GCSGC	1 cut(s)	2654
TfiI	GAWTC	7 cut(s)	2090, 2311, 3021, 3318, 3791, 3836, 4318
TscAI	CASTG	4 cut(s)	242, 3268, 3801, 3850
TseFI	GTSAC	5 cut(s)	1877, 2131, 3153, 3719, 4249
TseI	GCWGC	7 cut(s)	1848, 2891, 2894, 2897, 3126, 4155, 4158
Tsp45I	GTSAC	5 cut(s)	1877, 2131, 3153, 3719, 4249
TspGWI	ACGGA	1 cut(s)	2268
TspRI	CASTG	4 cut(s)	242, 3268, 3801, 3850
Van91I	CCANNNNNTGG	1 cut(s)	3059
VneI	GTGCAC	1 cut(s)	6
VpaK11BI	GGWCC	4 cut(s)	150, 1768, 2291, 2320
VspI	ATTAAT	2 cut(s)	1310, 2460
XagI	CCTNNNNNAGG	1 cut(s)	4176
XapI	RAATTY	6 cut(s)	92, 277, 645, 1250, 2521, 3542
XcmI	CCANNNNNNNNNTGG	3 cut(s)	722, 3329, 4018
XhoI	CTCGAG	1 cut(s)	4368
XmiI	GTMKAC	2 cut(s)	1437, 3589
XmnI	GAANNNNTTC	2 cut(s)	3146, 3533
XspI	CTAG	5 cut(s)	185, 198, 1382, 3632, 4295
ZrmI	AGTACT	3 cut(s)	370, 1145, 3474
Zsp2I	ATGCAT	2 cut(s)	1351, 2421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.