pycom17g24470

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
22786864 .. 22787244
381 bp
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UTR
Exon/CDS
Intron
pycom17g24470.2

Sequence Viewer

Length: 222 bp
ATGGGAGATTGCAGGCCATTGGGTTTCTTGCTGGGTTTGCCTTTTGCTTTGATCGCATTGGTCTTGTCTGTTCTCGGTGCTGTCATCTGGGTTTTCGGGACGGTGTTGAGTTGCTTGTGCCCGTGCTGCATTTGTTTTAGTGGATTAGCGAATCTTGCAGTTTCTCTTATCAAGCTTCCTGTCAAAATTATTACATGGTTTATTGACCAGATCCCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

7.78

Weight (kDa)

7.52

Isoelectric Point (pI)

20.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 205
AluBI AGCT 1 cut(s) 175
AluI AGCT 1 cut(s) 175
AlwI GGATC 1 cut(s) 205
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 122
BbvI GCAGC 1 cut(s) 113
BisI GCNGC 1 cut(s) 127
BlsI GCNGC 1 cut(s) 128
BseSI GKGCMC 1 cut(s) 122
BseXI GCAGC 1 cut(s) 113
BseYI CCCAGC 1 cut(s) 31
BshFI GGCC 1 cut(s) 16
BslFI GGGAC 1 cut(s) 112
BsmFI GGGAC 1 cut(s) 112
BsnI GGCC 1 cut(s) 16
Bsp1286I GDGCHC 1 cut(s) 122
Bsp143I GATC 2 cut(s) 51, 210
BspANI GGCC 1 cut(s) 16
BspPI GGATC 1 cut(s) 205
BssMI GATC 2 cut(s) 51, 210
Bst4CI ACNGT 1 cut(s) 103
BstC8I GCNNGC 1 cut(s) 14
BstKTI GATC 2 cut(s) 54, 213
BstMBI GATC 2 cut(s) 51, 210
BstMWI GCNNNNNNNGC 4 cut(s) 37, 53, 126, 155
BstSLI GKGCMC 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 113
BstX2I RGATCY 1 cut(s) 210
BstYI RGATCY 1 cut(s) 210
BsuRI GGCC 1 cut(s) 16
Cac8I GCNNGC 1 cut(s) 14
CviAII CATG 1 cut(s) 195
CviJI RGCY 2 cut(s) 16, 175
CviKI_1 RGCY 2 cut(s) 16, 175
DpnI GATC 2 cut(s) 53, 212
DpnII GATC 2 cut(s) 51, 210
FaeI CATG 1 cut(s) 198
FaiI YATR 1 cut(s) 196
FaqI GGGAC 1 cut(s) 112
FatI CATG 1 cut(s) 194
Fnu4HI GCNGC 1 cut(s) 127
Fsp4HI GCNGC 1 cut(s) 127
GluI GCNGC 1 cut(s) 127
GsaI CCCAGC 1 cut(s) 35
HaeIII GGCC 1 cut(s) 16
Hin1II CATG 1 cut(s) 198
HindIII AAGCTT 1 cut(s) 173
HinfI GANTC 1 cut(s) 151
Hpy188III TCNNGA 1 cut(s) 97
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4V TGCA 3 cut(s) 12, 129, 158
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 53, 126, 155
Hsp92II CATG 1 cut(s) 198
Kzo9I GATC 2 cut(s) 51, 210
LpnPI CCDG 3 cut(s) 17, 73, 192
Lsp1109I GCAGC 1 cut(s) 113
MalI GATC 2 cut(s) 53, 212
MboI GATC 2 cut(s) 51, 210
MflI RGATCY 1 cut(s) 210
MhlI GDGCHC 1 cut(s) 122
MluCI AATT 1 cut(s) 186
MwoI GCNNNNNNNGC 4 cut(s) 37, 53, 126, 155
NdeII GATC 2 cut(s) 51, 210
NlaIII CATG 1 cut(s) 198
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 31
PsuI RGATCY 1 cut(s) 210
SatI GCNGC 1 cut(s) 127
Sau3AI GATC 2 cut(s) 51, 210
SduI GDGCHC 1 cut(s) 122
SetI ASST 1 cut(s) 177
Sse9I AATT 1 cut(s) 186
TaaI ACNGT 1 cut(s) 103
TasI AATT 1 cut(s) 186
TfiI GAWTC 1 cut(s) 151
TseI GCWGC 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.