RchiOBHm_Chr7g0195321

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0019975
Physical Location & Seq
Reverse (-)
13200595 .. 13206096
5502 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 255 bp
ATGGGAGAGATTTTGGAGACGTACGTTTTTCAAGATAGGACCAGTGAGGGATATGAATCATTGCTCCGCATTGGCAAGAGGTACAAGTCGGCTGCTGGGATCATGGTGAATAGCTTTGCGGATTTGGAACTGGGTGCTCTCAAGGCTTTCAAGGAACAAGGGCCAGGTCTTGGTCTTCCACCGGTTTACCCTATCGGACCTGTGATTAAGACCGGTTCAACGGACGTGTTTAGTGGAAATGACTGCTTGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

84

Amino Acids

9.02

Weight (kDa)

4.93

Isoelectric Point (pI)

27.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019975)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0195321 RchiOBHm_Chr7g0195331
rosa_multiflora Rmu_sc0002381.1_g000006 Rmu_sc0039338.1_g000001 Rmu_sc0039339.1_g000001
rosa_rugosa Rorug07G0217100
rosa_samantha Rh7CG154900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 170
AciI CCGC 2 cut(s) 67, 119
AclWI GGATC 1 cut(s) 107
AfaI GTAC 2 cut(s) 23, 83
AfiI CCNNNNNNNGG 1 cut(s) 170
AflIII ACRYGT 1 cut(s) 225
AgeI ACCGGT 2 cut(s) 181, 212
AgsI TTSAA 3 cut(s) 32, 151, 219
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 1 cut(s) 163
AluBI AGCT 2 cut(s) 114, 252
AluI AGCT 2 cut(s) 114, 252
Alw21I GWGCWC 1 cut(s) 139
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 1 cut(s) 107
AoxI GGCC 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 92
AsiGI ACCGGT 2 cut(s) 181, 212
AspS9I GGNCC 3 cut(s) 39, 161, 197
AsuHPI GGTGA 1 cut(s) 118
AvaII GGWCC 2 cut(s) 39, 197
BbsI GAAGAC 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 139
BbvI GCAGC 1 cut(s) 79
BciT130I CCWGG 1 cut(s) 165
BcoDI GTCTC 1 cut(s) 11
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
Bme1390I CCNGG 1 cut(s) 165
Bme18I GGWCC 2 cut(s) 39, 197
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 3 cut(s) 39, 161, 197
BmrFI CCNGG 1 cut(s) 165
BmrI ACTGGG 1 cut(s) 140
BmuI ACTGGG 1 cut(s) 140
BpiI GAAGAC 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 125
BsaBI GATNNNNATC 1 cut(s) 55
BsaWI WCCGGW 2 cut(s) 181, 212
Bsc4I CCNNNNNNNGG 1 cut(s) 170
Bse118I RCCGGY 2 cut(s) 181, 212
Bse1I ACTGG 2 cut(s) 42, 135
Bse3DI GCAATG 1 cut(s) 59
Bse8I GATNNNNATC 1 cut(s) 55
BseBI CCWGG 1 cut(s) 165
BseJI GATNNNNATC 1 cut(s) 55
BseLI CCNNNNNNNGG 1 cut(s) 170
BseMI GCAATG 1 cut(s) 59
BseNI ACTGG 2 cut(s) 42, 135
BseXI GCAGC 1 cut(s) 79
BseYI CCCAGC 1 cut(s) 95
BshFI GGCC 1 cut(s) 163
BshTI ACCGGT 2 cut(s) 181, 212
BsiHKAI GWGCWC 1 cut(s) 139
BsiSI CCGG 2 cut(s) 182, 213
BsiWI CGTACG 1 cut(s) 21
BslI CCNNNNNNNGG 1 cut(s) 170
BsmAI GTCTC 1 cut(s) 11
BsmBI CGTCTC 1 cut(s) 11
BsnI GGCC 1 cut(s) 163
Bsp1286I GDGCHC 1 cut(s) 139
Bsp143I GATC 1 cut(s) 99
BspACI CCGC 2 cut(s) 67, 119
BspANI GGCC 1 cut(s) 163
BspPI GGATC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 59
BsrFI RCCGGY 2 cut(s) 181, 212
BsrI ACTGG 2 cut(s) 42, 135
BssAI RCCGGY 2 cut(s) 181, 212
BssMI GATC 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 165
BstKTI GATC 1 cut(s) 102
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 1 cut(s) 99
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstNI CCWGG 1 cut(s) 165
BstSCI CCNGG 1 cut(s) 163
BstV1I GCAGC 1 cut(s) 79
BstV2I GAAGAC 1 cut(s) 167
BsuRI GGCC 1 cut(s) 163
BtrI CACGTC 1 cut(s) 226
BtsIMutI CAGTG 1 cut(s) 49
Cfr10I RCCGGY 2 cut(s) 181, 212
Cfr13I GGNCC 3 cut(s) 39, 161, 197
Csp6I GTAC 2 cut(s) 22, 82
CspAI ACCGGT 2 cut(s) 181, 212
CviAII CATG 1 cut(s) 103
CviJI RGCY 5 cut(s) 92, 114, 146, 163, 252
CviKI_1 RGCY 5 cut(s) 92, 114, 146, 163, 252
CviQI GTAC 2 cut(s) 22, 82
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
Eco47I GGWCC 2 cut(s) 39, 197
EcoRII CCWGG 1 cut(s) 163
Esp3I CGTCTC 1 cut(s) 11
FaeI CATG 1 cut(s) 106
FaiI YATR 2 cut(s) 54, 104
FatI CATG 1 cut(s) 102
Fnu4HI GCNGC 1 cut(s) 93
Fsp4HI GCNGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 93
GsaI CCCAGC 1 cut(s) 99
HaeIII GGCC 1 cut(s) 163
HapII CCGG 2 cut(s) 182, 213
Hin1II CATG 1 cut(s) 106
HinfI GANTC 1 cut(s) 56
HpaII CCGG 2 cut(s) 182, 213
HphI GGTGA 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 32
Hpy8I GTNNAC 1 cut(s) 187
HpyCH4IV ACGT 3 cut(s) 20, 24, 225
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpySE526I ACGT 3 cut(s) 20, 24, 225
Hsp92II CATG 1 cut(s) 106
Kzo9I GATC 1 cut(s) 99
LmnI GCTCC 1 cut(s) 69
LpnPI CCDG 8 cut(s) 55, 81, 116, 150, 177, 195, 213, 226
Lsp1109I GCAGC 1 cut(s) 79
MaeII ACGT 3 cut(s) 20, 24, 225
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MboII GAAGA 1 cut(s) 167
MhlI GDGCHC 1 cut(s) 139
MnlI CCTC 2 cut(s) 40, 72
MseI TTAA 1 cut(s) 207
MspI CCGG 2 cut(s) 182, 213
MspR9I CCNGG 1 cut(s) 165
MvaI CCWGG 1 cut(s) 165
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeII GATC 1 cut(s) 99
NlaIII CATG 1 cut(s) 106
PfeI GAWTC 1 cut(s) 56
Pfl23II CGTACG 1 cut(s) 21
PflMI CCANNNNNTGG 1 cut(s) 170
PinAI ACCGGT 2 cut(s) 181, 212
PkrI GCNGC 1 cut(s) 94
Psp6I CCWGG 1 cut(s) 163
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 163
PspLI CGTACG 1 cut(s) 21
PspPI GGNCC 3 cut(s) 39, 161, 197
RsaI GTAC 2 cut(s) 23, 83
RsaNI GTAC 2 cut(s) 22, 82
SaqAI TTAA 1 cut(s) 207
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 1 cut(s) 99
Sau96I GGNCC 3 cut(s) 39, 161, 197
ScrFI CCNGG 1 cut(s) 165
SduI GDGCHC 1 cut(s) 139
SetI ASST 8 cut(s) 23, 27, 83, 116, 169, 202, 228, 254
SinI GGWCC 2 cut(s) 39, 197
SmlI CTYRAG 2 cut(s) 140, 247
SmoI CTYRAG 2 cut(s) 140, 247
SsiI CCGC 2 cut(s) 67, 119
StyD4I CCNGG 1 cut(s) 163
TaiI ACGT 3 cut(s) 23, 27, 228
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TscAI CASTG 1 cut(s) 49
TseI GCWGC 1 cut(s) 92
TspDTI ATGAA 1 cut(s) 69
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 49
Van91I CCANNNNNTGG 1 cut(s) 170
VpaK11BI GGWCC 2 cut(s) 39, 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.