Rmu_sc0039339.1_g000001

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0039339.1
OG0019975
Physical Location & Seq
Forward (+)
1 .. 221
221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0039339.1_g000001.1.cds

Sequence Viewer

Length: 221 bp
ataggaccagtgagggatatgaatcattgctccgcattggcaagaggtacaagtcggctgctgggatcatggtgaatagctctgcggatttggaactgggtgctctcaaggctttcaaggaacaagggccaggtcttggtcttccaccggtttaccctatcggacctgtgattaagaccggttcaacggacgtgtttagtggaaatgactgcttgagctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

72

Amino Acids

7.53

Weight (kDa)

8.09

Isoelectric Point (pI)

27.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019975)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0195321 RchiOBHm_Chr7g0195331
rosa_multiflora Rmu_sc0002381.1_g000006 Rmu_sc0039338.1_g000001 Rmu_sc0039339.1_g000001
rosa_rugosa Rorug07G0217100
rosa_samantha Rh7CG154900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 136
AciI CCGC 2 cut(s) 33, 85
AclWI GGATC 1 cut(s) 73
AfaI GTAC 1 cut(s) 49
AfiI CCNNNNNNNGG 1 cut(s) 136
AflIII ACRYGT 1 cut(s) 191
AgeI ACCGGT 2 cut(s) 147, 178
AgsI TTSAA 2 cut(s) 117, 185
AjiI CACGTC 1 cut(s) 192
AjnI CCWGG 1 cut(s) 129
AluBI AGCT 2 cut(s) 80, 218
AluI AGCT 2 cut(s) 80, 218
Alw21I GWGCWC 1 cut(s) 105
AlwI GGATC 1 cut(s) 73
AoxI GGCC 1 cut(s) 127
ApeKI GCWGC 1 cut(s) 58
AsiGI ACCGGT 2 cut(s) 147, 178
AspS9I GGNCC 3 cut(s) 5, 127, 163
AsuHPI GGTGA 1 cut(s) 84
AvaII GGWCC 2 cut(s) 5, 163
BbsI GAAGAC 1 cut(s) 133
Bbv12I GWGCWC 1 cut(s) 105
BbvI GCAGC 1 cut(s) 45
BciT130I CCWGG 1 cut(s) 131
BisI GCNGC 1 cut(s) 59
BlsI GCNGC 1 cut(s) 60
Bme1390I CCNGG 1 cut(s) 131
Bme18I GGWCC 2 cut(s) 5, 163
BmgBI CACGTC 1 cut(s) 192
BmgT120I GGNCC 3 cut(s) 5, 127, 163
BmrFI CCNGG 1 cut(s) 131
BmrI ACTGGG 1 cut(s) 106
BmuI ACTGGG 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 133
BpuEI CTTGAG 1 cut(s) 91
BsaBI GATNNNNATC 1 cut(s) 21
BsaWI WCCGGW 2 cut(s) 147, 178
Bsc4I CCNNNNNNNGG 1 cut(s) 136
Bse118I RCCGGY 2 cut(s) 147, 178
Bse1I ACTGG 2 cut(s) 8, 101
Bse3DI GCAATG 1 cut(s) 25
Bse8I GATNNNNATC 1 cut(s) 21
BseBI CCWGG 1 cut(s) 131
BseJI GATNNNNATC 1 cut(s) 21
BseLI CCNNNNNNNGG 1 cut(s) 136
BseMI GCAATG 1 cut(s) 25
BseNI ACTGG 2 cut(s) 8, 101
BseXI GCAGC 1 cut(s) 45
BseYI CCCAGC 1 cut(s) 61
BshFI GGCC 1 cut(s) 129
BshTI ACCGGT 2 cut(s) 147, 178
BsiHKAI GWGCWC 1 cut(s) 105
BsiSI CCGG 2 cut(s) 148, 179
BslI CCNNNNNNNGG 1 cut(s) 136
BsnI GGCC 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 105
Bsp143I GATC 1 cut(s) 65
BspACI CCGC 2 cut(s) 33, 85
BspANI GGCC 1 cut(s) 129
BspPI GGATC 1 cut(s) 73
BsrDI GCAATG 1 cut(s) 25
BsrFI RCCGGY 2 cut(s) 147, 178
BsrI ACTGG 2 cut(s) 8, 101
BssAI RCCGGY 2 cut(s) 147, 178
BssMI GATC 1 cut(s) 65
Bst2UI CCWGG 1 cut(s) 131
BstKTI GATC 1 cut(s) 68
BstMBI GATC 1 cut(s) 65
BstMWI GCNNNNNNNGC 1 cut(s) 109
BstNI CCWGG 1 cut(s) 131
BstSCI CCNGG 1 cut(s) 129
BstV1I GCAGC 1 cut(s) 45
BstV2I GAAGAC 1 cut(s) 133
BsuRI GGCC 1 cut(s) 129
BtrI CACGTC 1 cut(s) 192
BtsIMutI CAGTG 1 cut(s) 15
Cfr10I RCCGGY 2 cut(s) 147, 178
Cfr13I GGNCC 3 cut(s) 5, 127, 163
Csp6I GTAC 1 cut(s) 48
CspAI ACCGGT 2 cut(s) 147, 178
CviAII CATG 1 cut(s) 69
CviJI RGCY 5 cut(s) 58, 80, 112, 129, 218
CviKI_1 RGCY 5 cut(s) 58, 80, 112, 129, 218
CviQI GTAC 1 cut(s) 48
DpnI GATC 1 cut(s) 67
DpnII GATC 1 cut(s) 65
Eco47I GGWCC 2 cut(s) 5, 163
EcoRII CCWGG 1 cut(s) 129
FaeI CATG 1 cut(s) 72
FaiI YATR 2 cut(s) 20, 70
FatI CATG 1 cut(s) 68
Fnu4HI GCNGC 1 cut(s) 59
Fsp4HI GCNGC 1 cut(s) 59
GluI GCNGC 1 cut(s) 59
GsaI CCCAGC 1 cut(s) 65
HaeIII GGCC 1 cut(s) 129
HapII CCGG 2 cut(s) 148, 179
Hin1II CATG 1 cut(s) 72
HinfI GANTC 1 cut(s) 22
HpaII CCGG 2 cut(s) 148, 179
HphI GGTGA 1 cut(s) 84
Hpy166II GTNNAC 1 cut(s) 153
Hpy188I TCNGA 1 cut(s) 163
Hpy8I GTNNAC 1 cut(s) 153
HpyCH4IV ACGT 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 109
HpySE526I ACGT 1 cut(s) 191
Hsp92II CATG 1 cut(s) 72
Kzo9I GATC 1 cut(s) 65
LmnI GCTCC 1 cut(s) 35
LpnPI CCDG 8 cut(s) 21, 47, 82, 116, 143, 161, 179, 192
Lsp1109I GCAGC 1 cut(s) 45
MaeII ACGT 1 cut(s) 191
MalI GATC 1 cut(s) 67
MboI GATC 1 cut(s) 65
MboII GAAGA 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 105
MnlI CCTC 2 cut(s) 6, 38
MseI TTAA 1 cut(s) 173
MspI CCGG 2 cut(s) 148, 179
MspR9I CCNGG 1 cut(s) 131
MvaI CCWGG 1 cut(s) 131
MwoI GCNNNNNNNGC 1 cut(s) 109
NdeII GATC 1 cut(s) 65
NlaIII CATG 1 cut(s) 72
PfeI GAWTC 1 cut(s) 22
PflMI CCANNNNNTGG 1 cut(s) 136
PinAI ACCGGT 2 cut(s) 147, 178
PkrI GCNGC 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 129
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 1 cut(s) 129
PspPI GGNCC 3 cut(s) 5, 127, 163
RsaI GTAC 1 cut(s) 49
RsaNI GTAC 1 cut(s) 48
SaqAI TTAA 1 cut(s) 173
SatI GCNGC 1 cut(s) 59
Sau3AI GATC 1 cut(s) 65
Sau96I GGNCC 3 cut(s) 5, 127, 163
ScrFI CCNGG 1 cut(s) 131
SduI GDGCHC 1 cut(s) 105
SetI ASST 6 cut(s) 49, 82, 135, 168, 194, 220
SinI GGWCC 2 cut(s) 5, 163
SmlI CTYRAG 2 cut(s) 106, 213
SmoI CTYRAG 2 cut(s) 106, 213
SsiI CCGC 2 cut(s) 33, 85
StyD4I CCNGG 1 cut(s) 129
TaiI ACGT 1 cut(s) 194
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 1 cut(s) 173
Tru9I TTAA 1 cut(s) 173
TscAI CASTG 1 cut(s) 15
TseI GCWGC 1 cut(s) 58
TspDTI ATGAA 1 cut(s) 35
TspGWI ACGGA 1 cut(s) 202
TspRI CASTG 1 cut(s) 15
Van91I CCANNNNNTGG 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 5, 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.