Rh7CG154900

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0019975
Physical Location & Seq
Reverse (-)
12732372 .. 12733408
1037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG154900.1

Sequence Viewer

Length: 432 bp
ATGTACATTACCATGGAAGAGTCTTCCACCCACCAGAAACTTAAACCACCCCACATCGCCATTGTCCCAACTCCGGGTCTAGGCCACCTGATTCCCCTCGTCGAGCTGGCCAAACGACTGATCGTCCACCAGAACTTCACCGTCACCTTCTTCATCCCTAACCACGGTTCGAATCTGACTCCGCAAAAGAAAGTCCTGGAAGATTTGCCCGAAACCATATCCTCCACATTCCTCCCTCCCGTGAACTTGGACGACCTCCCTCACGATGCCTTCATGGAAACCAAAATCGCTCTCACCTTGACTCGCTCATTCCCGGCTCTGCGTGACTCGGTTAAGGCGCTCACCGAGTCCACTCGGCTAGTGACTATTGTTGTTGATATCTTTGGCACAGAGGTCTTTGATGTGGCTAAGGAATGCAATGTGCTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

143

Amino Acids

15.91

Weight (kDa)

5.81

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019975)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0195321 RchiOBHm_Chr7g0195331
rosa_multiflora Rmu_sc0002381.1_g000006 Rmu_sc0039338.1_g000001 Rmu_sc0039339.1_g000001
rosa_rugosa Rorug07G0217100
rosa_samantha Rh7CG154900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 182
AcoI YGGCCR 1 cut(s) 108
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 4 cut(s) 73, 74, 80, 164
AhdI GACNNNNNGTC 1 cut(s) 122
AjnI CCWGG 1 cut(s) 195
AluBI AGCT 1 cut(s) 106
AluI AGCT 1 cut(s) 106
AoxI GGCC 2 cut(s) 82, 108
AspLEI GCGC 1 cut(s) 340
AsuC2I CCSGG 2 cut(s) 75, 314
AsuHPI GGTGA 4 cut(s) 130, 136, 286, 334
AsuII TTCGAA 1 cut(s) 170
BalI TGGCCA 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 15
BciT130I CCWGG 1 cut(s) 197
BcnI CCSGG 2 cut(s) 75, 314
BfaI CTAG 2 cut(s) 80, 359
BfoI RGCGCY 1 cut(s) 341
Bme1390I CCNGG 3 cut(s) 75, 197, 314
BmeRI GACNNNNNGTC 1 cut(s) 122
BmrFI CCNGG 3 cut(s) 75, 197, 314
BmsI GCATC 1 cut(s) 256
BpiI GAAGAC 1 cut(s) 15
Bpu10I CCTNAGC 1 cut(s) 408
Bpu14I TTCGAA 1 cut(s) 170
BpuMI CCSGG 2 cut(s) 75, 314
BsaJI CCNNGG 2 cut(s) 12, 163
Bsc4I CCNNNNNNNGG 4 cut(s) 73, 74, 80, 164
Bse3DI GCAATG 1 cut(s) 424
BseBI CCWGG 1 cut(s) 197
BseDI CCNNGG 2 cut(s) 12, 163
BseGI GGATG 1 cut(s) 153
BseLI CCNNNNNNNGG 4 cut(s) 73, 74, 80, 164
BseMI GCAATG 1 cut(s) 424
BshFI GGCC 2 cut(s) 84, 110
BsiSI CCGG 2 cut(s) 74, 314
BslFI GGGAC 1 cut(s) 50
BslI CCNNNNNNNGG 4 cut(s) 73, 74, 80, 164
BsmFI GGGAC 1 cut(s) 50
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 2 cut(s) 84, 110
Bsp119I TTCGAA 1 cut(s) 170
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 1 cut(s) 120
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 1 cut(s) 182
BspANI GGCC 2 cut(s) 84, 110
BspT104I TTCGAA 1 cut(s) 170
BsrDI GCAATG 1 cut(s) 424
BsrGI TGTACA 1 cut(s) 3
BssECI CCNNGG 2 cut(s) 12, 163
BssMI GATC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 197
Bst4CI ACNGT 2 cut(s) 142, 167
Bst6I CTCTTC 1 cut(s) 12
BstAUI TGTACA 1 cut(s) 3
BstBI TTCGAA 1 cut(s) 170
BstC8I GCNNGC 1 cut(s) 108
BstDEI CTNAG 2 cut(s) 408, 429
BstDSI CCRYGG 2 cut(s) 12, 163
BstF5I GGATG 1 cut(s) 153
BstH2I RGCGCY 1 cut(s) 341
BstHHI GCGC 1 cut(s) 340
BstKTI GATC 1 cut(s) 123
BstMBI GATC 1 cut(s) 120
BstNI CCWGG 1 cut(s) 197
BstSCI CCNGG 3 cut(s) 73, 195, 312
BstV2I GAAGAC 1 cut(s) 15
BsuRI GGCC 2 cut(s) 84, 110
BtgI CCRYGG 2 cut(s) 12, 163
BtgZI GCGATG 1 cut(s) 40
BtsCI GGATG 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 108
CfoI GCGC 1 cut(s) 340
Csp6I GTAC 1 cut(s) 4
CviAII CATG 2 cut(s) 13, 274
CviJI RGCY 6 cut(s) 84, 106, 110, 317, 358, 407
CviKI_1 RGCY 6 cut(s) 84, 106, 110, 317, 358, 407
CviQI GTAC 1 cut(s) 4
DdeI CTNAG 2 cut(s) 408, 429
DpnI GATC 1 cut(s) 122
DpnII GATC 1 cut(s) 120
DriI GACNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 1 cut(s) 12
Eam1105I GACNNNNNGTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 12
Eco130I CCWWGG 1 cut(s) 12
Eco32I GATATC 1 cut(s) 379
EcoRII CCWGG 1 cut(s) 195
EcoRV GATATC 1 cut(s) 379
EcoT14I CCWWGG 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 12
FaeI CATG 2 cut(s) 16, 277
FaiI YATR 3 cut(s) 14, 218, 275
FaqI GGGAC 1 cut(s) 50
FatI CATG 2 cut(s) 12, 273
FokI GGATG 1 cut(s) 140
FspBI CTAG 2 cut(s) 80, 359
GlaI GCGC 1 cut(s) 339
HaeII RGCGCY 1 cut(s) 341
HaeIII GGCC 2 cut(s) 84, 110
HapII CCGG 2 cut(s) 74, 314
HhaI GCGC 1 cut(s) 340
Hin1II CATG 2 cut(s) 16, 277
Hin6I GCGC 1 cut(s) 338
HinP1I GCGC 1 cut(s) 338
HinfI GANTC 7 cut(s) 20, 91, 172, 178, 301, 326, 347
HpaII CCGG 2 cut(s) 74, 314
HphI GGTGA 4 cut(s) 130, 136, 286, 334
Hpy166II GTNNAC 3 cut(s) 127, 244, 351
Hpy188I TCNGA 1 cut(s) 177
Hpy188III TCNNGA 1 cut(s) 263
Hpy8I GTNNAC 3 cut(s) 127, 244, 351
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 2 cut(s) 157, 280
HpyCH4III ACNGT 2 cut(s) 142, 167
HpyCH4V TGCA 1 cut(s) 417
HpyF3I CTNAG 2 cut(s) 408, 429
Hsp92II CATG 2 cut(s) 16, 277
HspAI GCGC 1 cut(s) 338
Kzo9I GATC 1 cut(s) 120
LpnPI CCDG 8 cut(s) 47, 87, 92, 101, 143, 182, 209, 327
LweI GCATC 1 cut(s) 256
MaeI CTAG 2 cut(s) 80, 359
MaeIII GTNAC 3 cut(s) 142, 323, 361
MalI GATC 1 cut(s) 122
MboI GATC 1 cut(s) 120
MboII GAAGA 4 cut(s) 15, 29, 142, 212
MlsI TGGCCA 1 cut(s) 110
MluNI TGGCCA 1 cut(s) 110
MlyI GAGTC 5 cut(s) 29, 172, 295, 320, 356
MnlI CCTC 7 cut(s) 107, 232, 242, 246, 266, 270, 385
Mox20I TGGCCA 1 cut(s) 110
MscI TGGCCA 1 cut(s) 110
MseI TTAA 2 cut(s) 42, 333
MslI CAYNNNNRTG 1 cut(s) 11
Msp20I TGGCCA 1 cut(s) 110
MspI CCGG 2 cut(s) 74, 314
MspR9I CCNGG 3 cut(s) 75, 197, 314
Mva1269I GAATGC 1 cut(s) 419
MvaI CCWGG 1 cut(s) 197
NciI CCSGG 2 cut(s) 75, 314
NcoI CCATGG 1 cut(s) 12
NdeII GATC 1 cut(s) 120
NlaIII CATG 2 cut(s) 16, 277
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 3 cut(s) 142, 323, 361
NspV TTCGAA 1 cut(s) 170
PctI GAATGC 1 cut(s) 419
PfeI GAWTC 2 cut(s) 91, 172
PfoI TCCNGGA 1 cut(s) 195
PleI GAGTC 5 cut(s) 28, 172, 295, 320, 355
PpsI GAGTC 5 cut(s) 28, 172, 295, 320, 355
Psp6I CCWGG 1 cut(s) 195
PspGI CCWGG 1 cut(s) 195
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
RseI CAYNNNNRTG 1 cut(s) 11
SaqAI TTAA 2 cut(s) 42, 333
Sau3AI GATC 1 cut(s) 120
SchI GAGTC 5 cut(s) 29, 172, 295, 320, 356
ScrFI CCNGG 3 cut(s) 75, 197, 314
SetI ASST 6 cut(s) 90, 108, 149, 258, 299, 396
SfaNI GCATC 1 cut(s) 256
SfuI TTCGAA 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 11
SsiI CCGC 1 cut(s) 182
SspMI CTAG 2 cut(s) 80, 359
StyD4I CCNGG 3 cut(s) 73, 195, 312
StyI CCWWGG 1 cut(s) 12
TaaI ACNGT 2 cut(s) 142, 167
TaqI TCGA 2 cut(s) 102, 170
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 2 cut(s) 91, 172
Tru1I TTAA 2 cut(s) 42, 333
Tru9I TTAA 2 cut(s) 42, 333
TseFI GTSAC 3 cut(s) 142, 323, 361
Tsp45I GTSAC 3 cut(s) 142, 323, 361
TspDTI ATGAA 2 cut(s) 142, 262
XspI CTAG 2 cut(s) 80, 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.