Rmu_sc0002381.1_g000006

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002381.1
OG0019975
Physical Location & Seq
Forward (+)
27728 .. 28318
591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002381.1_g000006.1.cds

Sequence Viewer

Length: 591 bp
atgaaacctccccatgtggccattgtcccaagtccaggtataggtcatctcattcccctcgttgagctagccaaacgacttgtcgtccaccaccacttcagcgtcacctttttcatccccagcgatgatggatcaaacttgacaccccaaagaaaagttctggataccttgccccaaaccatatcatccacctttctccctcccgtaaactttgacgacctccctaaggacattaagcacttaaccagaatcgctctcaccatgactcggtccctccctgctcttcgtgactcgatcaaggccctagccgagtcgactcggctggttgccctagtggttgatctttttggttgcgatgcttttgatatggctaaggaatttgatgtgcttccctacattttttaccctacaaatgctatggtattgtggtttcagtttgaattgccaaagctcgaccagaccatttcttgtgagtacagagatttgcttgaaccggtcaaactcccgggatgtgtgccgatgcacggtaaaaatttgttagattcggttcaagataggaccaacccattcaaagagaaatctgaagtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

196

Amino Acids

22.06

Weight (kDa)

6.14

Isoelectric Point (pI)

42.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019975)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0195321 RchiOBHm_Chr7g0195331
rosa_multiflora Rmu_sc0002381.1_g000006 Rmu_sc0039338.1_g000001 Rmu_sc0039339.1_g000001
rosa_rugosa Rorug07G0217100
rosa_samantha Rh7CG154900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 314
AclWI GGATC 1 cut(s) 139
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 2 cut(s) 377, 532
AcuI CTGAAG 1 cut(s) 82
AfaI GTAC 1 cut(s) 476
AfiI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
AgeI ACCGGT 1 cut(s) 493
AgsI TTSAA 4 cut(s) 440, 491, 551, 571
AhdI GACNNNNNGTC 1 cut(s) 83
AjnI CCWGG 1 cut(s) 34
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 2 cut(s) 67, 451
AluI AGCT 2 cut(s) 67, 451
AlwI GGATC 1 cut(s) 139
Ama87I CYCGRG 1 cut(s) 505
AoxI GGCC 2 cut(s) 18, 300
ApoI RAATTY 2 cut(s) 377, 532
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
AsiGI ACCGGT 1 cut(s) 493
AspS9I GGNCC 3 cut(s) 270, 301, 558
AsuC2I CCSGG 2 cut(s) 506, 507
AsuHPI GGTGA 2 cut(s) 97, 250
AsuNHI GCTAGC 1 cut(s) 67
AvaI CYCGRG 1 cut(s) 505
AvaII GGWCC 2 cut(s) 270, 558
AxyI CCTNAGG 1 cut(s) 225
BalI TGGCCA 1 cut(s) 20
BccI CCATC 1 cut(s) 122
BciT130I CCWGG 1 cut(s) 36
BciVI GTATCC 1 cut(s) 157
BcnI CCSGG 2 cut(s) 506, 507
BfaI CTAG 3 cut(s) 68, 305, 332
BfuI GTATCC 1 cut(s) 157
Bme1390I CCNGG 3 cut(s) 36, 506, 507
Bme18I GGWCC 2 cut(s) 270, 558
BmeRI GACNNNNNGTC 1 cut(s) 83
BmeT110I CYCGRG 1 cut(s) 505
BmgT120I GGNCC 3 cut(s) 270, 301, 558
BmiI GGNNCC 1 cut(s) 272
BmrFI CCNGG 3 cut(s) 36, 506, 507
BmsI GCATC 2 cut(s) 346, 510
BmtI GCTAGC 1 cut(s) 71
Bpu10I CCTNAGC 1 cut(s) 372
BpuMI CCSGG 2 cut(s) 506, 507
BsaJI CCNNGG 1 cut(s) 505
BsaWI WCCGGW 1 cut(s) 493
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
Bse118I RCCGGY 1 cut(s) 493
Bse21I CCTNAGG 1 cut(s) 225
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 505
BseGI GGATG 3 cut(s) 114, 185, 515
BseLI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
BseYI CCCAGC 1 cut(s) 119
BshFI GGCC 2 cut(s) 20, 302
BshTI ACCGGT 1 cut(s) 493
BsiHKCI CYCGRG 1 cut(s) 505
BsiSI CCGG 2 cut(s) 494, 506
BslFI GGGAC 2 cut(s) 11, 256
BslI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
BsmFI GGGAC 2 cut(s) 11, 256
BsnI GGCC 2 cut(s) 20, 302
BsoBI CYCGRG 1 cut(s) 505
Bsp143I GATC 3 cut(s) 131, 294, 340
BspANI GGCC 2 cut(s) 20, 302
BspLI GGNNCC 1 cut(s) 272
BspOI GCTAGC 1 cut(s) 71
BspPI GGATC 1 cut(s) 139
BspQI GCTCTTC 1 cut(s) 288
BsrFI RCCGGY 1 cut(s) 493
BssAI RCCGGY 1 cut(s) 493
BssECI CCNNGG 1 cut(s) 505
BssMI GATC 3 cut(s) 131, 294, 340
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 527
Bst6I CTCTTC 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 69
BstDEI CTNAG 2 cut(s) 225, 372
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 3 cut(s) 114, 185, 515
BstKTI GATC 3 cut(s) 134, 297, 343
BstMBI GATC 3 cut(s) 131, 294, 340
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 3 cut(s) 34, 504, 505
Bsu36I CCTNAGG 1 cut(s) 225
BsuI GTATCC 1 cut(s) 157
BsuRI GGCC 2 cut(s) 20, 302
BtgZI GCGATG 2 cut(s) 138, 369
BtsCI GGATG 3 cut(s) 114, 185, 515
Cac8I GCNNGC 1 cut(s) 69
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 3 cut(s) 270, 301, 558
Cfr9I CCCGGG 1 cut(s) 505
CseI GACGC 1 cut(s) 91
Csp6I GTAC 1 cut(s) 475
CspAI ACCGGT 1 cut(s) 493
CviAII CATG 2 cut(s) 14, 262
CviJI RGCY 8 cut(s) 20, 67, 71, 302, 308, 322, 371, 451
CviKI_1 RGCY 8 cut(s) 20, 67, 71, 302, 308, 322, 371, 451
CviQI GTAC 1 cut(s) 475
DdeI CTNAG 2 cut(s) 225, 372
DpnI GATC 3 cut(s) 133, 296, 342
DpnII GATC 3 cut(s) 131, 294, 340
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 288
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 288
Eco47I GGWCC 2 cut(s) 270, 558
Eco57I CTGAAG 1 cut(s) 82
Eco81I CCTNAGG 1 cut(s) 225
Eco88I CYCGRG 1 cut(s) 505
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoO109I RGGNCCY 1 cut(s) 301
EcoRII CCWGG 1 cut(s) 34
FaeI CATG 2 cut(s) 17, 265
FaiI YATR 6 cut(s) 15, 41, 182, 263, 368, 419
FaqI GGGAC 2 cut(s) 11, 256
FatI CATG 2 cut(s) 13, 261
FblI GTMKAC 1 cut(s) 314
FokI GGATG 3 cut(s) 101, 172, 522
FspBI CTAG 3 cut(s) 68, 305, 332
GsaI CCCAGC 1 cut(s) 123
HaeIII GGCC 2 cut(s) 20, 302
HapII CCGG 2 cut(s) 494, 506
HgaI GACGC 1 cut(s) 91
Hin1II CATG 2 cut(s) 17, 265
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HinfI GANTC 6 cut(s) 249, 265, 290, 311, 316, 542
HpaII CCGG 2 cut(s) 494, 506
HphI GGTGA 2 cut(s) 97, 250
Hpy166II GTNNAC 3 cut(s) 88, 208, 315
Hpy188I TCNGA 1 cut(s) 583
Hpy188III TCNNGA 3 cut(s) 161, 287, 551
Hpy8I GTNNAC 3 cut(s) 88, 208, 315
HpyCH4III ACNGT 1 cut(s) 527
HpyCH4V TGCA 1 cut(s) 523
HpyF3I CTNAG 2 cut(s) 225, 372
Hsp92II CATG 2 cut(s) 17, 265
Kzo9I GATC 3 cut(s) 131, 294, 340
LguI GCTCTTC 1 cut(s) 288
LweI GCATC 2 cut(s) 346, 510
MaeI CTAG 3 cut(s) 68, 305, 332
MaeIII GTNAC 2 cut(s) 103, 287
MalI GATC 3 cut(s) 133, 296, 342
MboI GATC 3 cut(s) 131, 294, 340
MboII GAAGA 1 cut(s) 275
MlsI TGGCCA 1 cut(s) 20
MluCI AATT 3 cut(s) 377, 440, 532
MluNI TGGCCA 1 cut(s) 20
MlyI GAGTC 4 cut(s) 259, 284, 310, 320
MnlI CCTC 5 cut(s) 18, 68, 210, 230, 284
Mox20I TGGCCA 1 cut(s) 20
MscI TGGCCA 1 cut(s) 20
MseI TTAA 2 cut(s) 234, 242
Msp20I TGGCCA 1 cut(s) 20
MspI CCGG 2 cut(s) 494, 506
MspR9I CCNGG 3 cut(s) 36, 506, 507
MvaI CCWGG 1 cut(s) 36
NciI CCSGG 2 cut(s) 506, 507
NdeII GATC 3 cut(s) 131, 294, 340
NheI GCTAGC 1 cut(s) 67
NlaIII CATG 2 cut(s) 17, 265
NlaIV GGNNCC 1 cut(s) 272
NmeAIII GCCGAG 2 cut(s) 298, 334
NmuCI GTSAC 2 cut(s) 103, 287
PciSI GCTCTTC 1 cut(s) 288
PfeI GAWTC 2 cut(s) 249, 542
PflFI GACNNNGTC 1 cut(s) 268
PinAI ACCGGT 1 cut(s) 493
PleI GAGTC 4 cut(s) 259, 284, 310, 319
PpsI GAGTC 4 cut(s) 259, 284, 310, 319
Psp6I CCWGG 1 cut(s) 34
PspFI CCCAGC 1 cut(s) 119
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 1 cut(s) 272
PspPI GGNCC 3 cut(s) 270, 301, 558
PsyI GACNNNGTC 1 cut(s) 268
RsaI GTAC 1 cut(s) 476
RsaNI GTAC 1 cut(s) 475
SalI GTCGAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 288
SaqAI TTAA 2 cut(s) 234, 242
Sau3AI GATC 3 cut(s) 131, 294, 340
Sau96I GGNCC 3 cut(s) 270, 301, 558
SchI GAGTC 4 cut(s) 259, 284, 310, 320
ScrFI CCNGG 3 cut(s) 36, 506, 507
SetI ASST 9 cut(s) 10, 40, 46, 69, 110, 170, 194, 222, 453
SfaNI GCATC 2 cut(s) 346, 510
SinI GGWCC 2 cut(s) 270, 558
SmaI CCCGGG 1 cut(s) 507
Sse9I AATT 3 cut(s) 377, 440, 532
SspMI CTAG 3 cut(s) 68, 305, 332
StyD4I CCNGG 3 cut(s) 34, 504, 505
TaaI ACNGT 1 cut(s) 527
TaqI TCGA 3 cut(s) 293, 314, 453
TaqII GACCGA 1 cut(s) 258
TasI AATT 3 cut(s) 377, 440, 532
TatI WGTACW 1 cut(s) 474
TfiI GAWTC 2 cut(s) 249, 542
Tru1I TTAA 2 cut(s) 234, 242
Tru9I TTAA 2 cut(s) 234, 242
TseFI GTSAC 2 cut(s) 103, 287
Tsp45I GTSAC 2 cut(s) 103, 287
TspDTI ATGAA 2 cut(s) 17, 103
TspMI CCCGGG 1 cut(s) 505
Tth111I GACNNNGTC 1 cut(s) 268
VpaK11BI GGWCC 2 cut(s) 270, 558
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 2 cut(s) 377, 532
XmaI CCCGGG 1 cut(s) 505
XmiI GTMKAC 1 cut(s) 314
XspI CTAG 3 cut(s) 68, 305, 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.