Prokaryotic RING finger family 4
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0077461 |
| rosa_laevigata | RLG00000036700 |
| rosa_multiflora | Rmu_co8463923.1_g000001 |
| rosa_rugosa | Rorug05G0455300 |
| rosa_samantha | Rh5AG453400 Rh5BG531800 Rh5DG543700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 111 |
| AfaI | GTAC | 1 cut(s) | 31 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| ApoI | RAATTY | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 1 cut(s) | 136 |
| BccI | CCATC | 1 cut(s) | 52 |
| BfmI | CTRYAG | 1 cut(s) | 151 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 57, 89 |
| Bse3DI | GCAATG | 1 cut(s) | 161 |
| BseGI | GGATG | 1 cut(s) | 58 |
| BseMI | GCAATG | 1 cut(s) | 161 |
| BseRI | GAGGAG | 1 cut(s) | 116 |
| BspMAI | CTGCAG | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 1 cut(s) | 34 |
| Bst6I | CTCTTC | 1 cut(s) | 93 |
| BstF5I | GGATG | 1 cut(s) | 58 |
| BstSFI | CTRYAG | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 58 |
| CseI | GACGC | 1 cut(s) | 155 |
| Csp6I | GTAC | 1 cut(s) | 30 |
| CviAII | CATG | 2 cut(s) | 88, 118 |
| CviJI | RGCY | 1 cut(s) | 73 |
| CviKI_1 | RGCY | 1 cut(s) | 73 |
| CviQI | GTAC | 1 cut(s) | 30 |
| Eam1104I | CTCTTC | 1 cut(s) | 93 |
| EarI | CTCTTC | 1 cut(s) | 93 |
| FaeI | CATG | 2 cut(s) | 91, 121 |
| FaiI | YATR | 2 cut(s) | 89, 119 |
| FatI | CATG | 2 cut(s) | 87, 117 |
| FokI | GGATG | 1 cut(s) | 65 |
| HgaI | GACGC | 1 cut(s) | 155 |
| Hin1II | CATG | 2 cut(s) | 91, 121 |
| HinfI | GANTC | 1 cut(s) | 39 |
| HphI | GGTGA | 1 cut(s) | 136 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 4 cut(s) | 38, 44, 79, 171 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 34 |
| HpyCH4IV | ACGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 2 cut(s) | 117, 153 |
| HpySE526I | ACGT | 1 cut(s) | 185 |
| Hsp92II | CATG | 2 cut(s) | 91, 121 |
| MaeII | ACGT | 1 cut(s) | 185 |
| MboII | GAAGA | 2 cut(s) | 57, 110 |
| MluCI | AATT | 2 cut(s) | 81, 111 |
| MnlI | CCTC | 5 cut(s) | 16, 59, 94, 115, 174 |
| MseI | TTAA | 1 cut(s) | 147 |
| MslI | CAYNNNNRTG | 1 cut(s) | 122 |
| NlaIII | CATG | 2 cut(s) | 91, 121 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| PstI | CTGCAG | 1 cut(s) | 155 |
| RsaI | GTAC | 1 cut(s) | 31 |
| RsaNI | GTAC | 1 cut(s) | 30 |
| RseI | CAYNNNNRTG | 1 cut(s) | 122 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SetI | ASST | 4 cut(s) | 27, 75, 126, 188 |
| SfcI | CTRYAG | 1 cut(s) | 151 |
| SgeI | CNNG | 3 cut(s) | 22, 100, 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 122 |
| Sse9I | AATT | 2 cut(s) | 81, 111 |
| TaaI | ACNGT | 1 cut(s) | 34 |
| TaiI | ACGT | 1 cut(s) | 188 |
| TasI | AATT | 2 cut(s) | 81, 111 |
| TatI | WGTACW | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TspDTI | ATGAA | 1 cut(s) | 150 |
| XapI | RAATTY | 1 cut(s) | 111 |