RchiOBHm_Chr3g0477501

Carboxylesterase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
23397532 .. 23397765
234 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 234 bp
ATGATTGAGAGTGGTGGTATCGTTGGCTTTGACAGGGTTTTTGTCTTGGGTAAGTCTTCTGGTGGCACCACAGCTCAGCTGGCGGTTTCGCTCGGAGGCGGATCGGTCAAGTTGGCGCCGCTTCGGGTACGGGGGTACGTGCTGATGGCGCCATTTTTTGGTGGAGTGGAGTGGACAAAATCAGAGCGGAAGCGTCGTGAACAATTGATGACATTGGATGTAGTTGAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

77

Amino Acids

8.3

Weight (kDa)

10.14

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021378)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0477501
rosa_laevigata RLG00000023714
rosa_multiflora Rmu_sc0006657.1_g000009
rosa_samantha Rh3BG245200 Rh3DG238400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 65, 115, 148
AccB7I CCANNNNNTGG 1 cut(s) 158
AccBSI CCGCTC 1 cut(s) 187
AciI CCGC 4 cut(s) 83, 99, 119, 187
AclWI GGATC 1 cut(s) 109
AcyI GRCGYC 2 cut(s) 116, 149
AfaI GTAC 2 cut(s) 129, 137
AfiI CCNNNNNNNGG 1 cut(s) 158
AgsI TTSAA 1 cut(s) 227
AluBI AGCT 2 cut(s) 74, 79
AluI AGCT 2 cut(s) 74, 79
AlwI GGATC 1 cut(s) 109
ArsI GACNNNNNNTTYG 2 cut(s) 23, 55
AspLEI GCGC 2 cut(s) 118, 151
BaeI ACNNNNGTAYC 2 cut(s) 119, 152
BanI GGYRCC 3 cut(s) 65, 115, 148
BbsI GAAGAC 1 cut(s) 48
BccI CCATC 1 cut(s) 139
BfoI RGCGCY 2 cut(s) 119, 152
BisI GCNGC 1 cut(s) 119
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 120
BmiI GGNNCC 3 cut(s) 67, 117, 150
BpiI GAAGAC 1 cut(s) 48
Bpu1102I GCTNAGC 1 cut(s) 75
BsaAI YACGTR 1 cut(s) 139
BsaHI GRCGYC 2 cut(s) 116, 149
Bsc4I CCNNNNNNNGG 1 cut(s) 158
BseGI GGATG 1 cut(s) 223
BseLI CCNNNNNNNGG 1 cut(s) 158
BseMII CTCAG 1 cut(s) 89
BshNI GGYRCC 3 cut(s) 65, 115, 148
BslI CCNNNNNNNGG 1 cut(s) 158
Bsp143I GATC 1 cut(s) 101
Bsp1720I GCTNAGC 1 cut(s) 75
BspACI CCGC 4 cut(s) 83, 99, 119, 187
BspCNI CTCAG 1 cut(s) 88
BspLI GGNNCC 3 cut(s) 67, 117, 150
BspPI GGATC 1 cut(s) 109
BspT107I GGYRCC 3 cut(s) 65, 115, 148
BsrBI CCGCTC 1 cut(s) 187
BssMI GATC 1 cut(s) 101
BssNI GRCGYC 2 cut(s) 116, 149
BstACI GRCGYC 2 cut(s) 116, 149
BstBAI YACGTR 1 cut(s) 139
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 75
BstF5I GGATG 1 cut(s) 223
BstH2I RGCGCY 2 cut(s) 119, 152
BstHHI GCGC 2 cut(s) 118, 151
BstKTI GATC 1 cut(s) 104
BstMBI GATC 1 cut(s) 101
BstMWI GCNNNNNNNGC 2 cut(s) 80, 148
BstV2I GAAGAC 1 cut(s) 48
BtsCI GGATG 1 cut(s) 223
Cac8I GCNNGC 1 cut(s) 81
CfoI GCGC 2 cut(s) 118, 151
CseI GACGC 1 cut(s) 182
Csp6I GTAC 2 cut(s) 128, 136
CviJI RGCY 3 cut(s) 27, 74, 79
CviKI_1 RGCY 3 cut(s) 27, 74, 79
CviQI GTAC 2 cut(s) 128, 136
DdeI CTNAG 1 cut(s) 75
DinI GGCGCC 2 cut(s) 117, 150
DpnI GATC 1 cut(s) 103
DpnII GATC 1 cut(s) 101
EciI GGCGGA 1 cut(s) 114
EgeI GGCGCC 2 cut(s) 117, 150
EheI GGCGCC 2 cut(s) 117, 150
Fnu4HI GCNGC 1 cut(s) 119
FokI GGATG 1 cut(s) 230
Fsp4HI GCNGC 1 cut(s) 119
GlaI GCGC 2 cut(s) 117, 150
GluI GCNGC 1 cut(s) 119
HaeII RGCGCY 2 cut(s) 119, 152
HgaI GACGC 1 cut(s) 182
HhaI GCGC 2 cut(s) 118, 151
Hin1I GRCGYC 2 cut(s) 116, 149
Hin6I GCGC 2 cut(s) 116, 149
HinP1I GCGC 2 cut(s) 116, 149
Hpy166II GTNNAC 2 cut(s) 174, 200
Hpy188I TCNGA 2 cut(s) 95, 184
Hpy188III TCNNGA 1 cut(s) 197
Hpy8I GTNNAC 2 cut(s) 174, 200
Hpy99I CGWCG 1 cut(s) 198
HpyCH4IV ACGT 1 cut(s) 138
HpyF10VI GCNNNNNNNGC 2 cut(s) 80, 148
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 1 cut(s) 138
Hsp92I GRCGYC 2 cut(s) 116, 149
HspAI GCGC 2 cut(s) 116, 149
KasI GGCGCC 2 cut(s) 115, 148
Kzo9I GATC 1 cut(s) 101
LpnPI CCDG 3 cut(s) 19, 45, 65
MaeII ACGT 1 cut(s) 138
MalI GATC 1 cut(s) 103
MbiI CCGCTC 1 cut(s) 187
MboI GATC 1 cut(s) 101
MboII GAAGA 1 cut(s) 48
MfeI CAATTG 1 cut(s) 203
MluCI AATT 1 cut(s) 203
Mly113I GGCGCC 2 cut(s) 116, 149
MnlI CCTC 1 cut(s) 89
MspA1I CMGCKG 1 cut(s) 79
MunI CAATTG 1 cut(s) 203
MwoI GCNNNNNNNGC 2 cut(s) 80, 148
NarI GGCGCC 2 cut(s) 116, 149
NdeII GATC 1 cut(s) 101
NlaIV GGNNCC 3 cut(s) 67, 117, 150
PflMI CCANNNNNTGG 1 cut(s) 158
PkrI GCNGC 1 cut(s) 120
PluTI GGCGCC 2 cut(s) 119, 152
Ppu21I YACGTR 1 cut(s) 139
PspN4I GGNNCC 3 cut(s) 67, 117, 150
PvuII CAGCTG 1 cut(s) 79
RsaI GTAC 2 cut(s) 129, 137
RsaNI GTAC 2 cut(s) 128, 136
SatI GCNGC 1 cut(s) 119
Sau3AI GATC 1 cut(s) 101
SetI ASST 4 cut(s) 76, 81, 141, 233
SfoI GGCGCC 2 cut(s) 117, 150
Sse9I AATT 1 cut(s) 203
SsiI CCGC 4 cut(s) 83, 99, 119, 187
SspDI GGCGCC 2 cut(s) 115, 148
TaiI ACGT 1 cut(s) 141
TaqII GACCGA 1 cut(s) 94
TasI AATT 1 cut(s) 203
TauI GCSGC 1 cut(s) 121
Van91I CCANNNNNTGG 1 cut(s) 158
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.