RchiOBHm_Chr2g0113981

Oxidation resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
26069641 .. 26070417
777 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 141 bp
ATGGGTAGGCCAAAGAGTCTTCGCAGCAAAGCGGCCCACTTTGTGATTTATATCACTACTGGATTGCTCAACCCCATTTCTGACAAACCCTCCGAACCTTCCCCTTCTCCTCCTCCTGAAGATGTGGATGGGTCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

46

Amino Acids

4.95

Weight (kDa)

8.21

Isoelectric Point (pI)

74.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 32
AcuI CTGAAG 1 cut(s) 138
AdeI CACNNNGTG 1 cut(s) 43
AoxI GGCC 2 cut(s) 8, 33
ApeKI GCWGC 1 cut(s) 24
AspS9I GGNCC 2 cut(s) 34, 132
AvaII GGWCC 1 cut(s) 132
BbsI GAAGAC 1 cut(s) 11
BbvI GCAGC 1 cut(s) 36
BccI CCATC 1 cut(s) 122
BisI GCNGC 2 cut(s) 25, 33
BlsI GCNGC 2 cut(s) 26, 34
Bme18I GGWCC 1 cut(s) 132
BmgT120I GGNCC 2 cut(s) 34, 132
BmiI GGNNCC 1 cut(s) 133
BpiI GAAGAC 1 cut(s) 11
BsaBI GATNNNNATC 1 cut(s) 50
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bse1I ACTGG 1 cut(s) 64
Bse8I GATNNNNATC 1 cut(s) 50
BseGI GGATG 1 cut(s) 133
BseJI GATNNNNATC 1 cut(s) 50
BseNI ACTGG 1 cut(s) 64
BseRI GAGGAG 2 cut(s) 99, 102
BseXI GCAGC 1 cut(s) 36
BshFI GGCC 2 cut(s) 10, 35
BsnI GGCC 2 cut(s) 10, 35
BspACI CCGC 1 cut(s) 32
BspANI GGCC 2 cut(s) 10, 35
BspLI GGNNCC 1 cut(s) 133
BsrI ACTGG 1 cut(s) 64
BstF5I GGATG 1 cut(s) 133
BstV1I GCAGC 1 cut(s) 36
BstV2I GAAGAC 1 cut(s) 11
BsuRI GGCC 2 cut(s) 10, 35
BtsCI GGATG 1 cut(s) 133
Cfr13I GGNCC 2 cut(s) 34, 132
CviJI RGCY 2 cut(s) 10, 35
CviKI_1 RGCY 2 cut(s) 10, 35
DraIII CACNNNGTG 1 cut(s) 43
Eco47I GGWCC 1 cut(s) 132
Eco57I CTGAAG 1 cut(s) 138
FaiI YATR 1 cut(s) 51
Fnu4HI GCNGC 2 cut(s) 25, 33
Fsp4HI GCNGC 2 cut(s) 25, 33
GluI GCNGC 2 cut(s) 25, 33
HaeIII GGCC 2 cut(s) 10, 35
HinfI GANTC 1 cut(s) 16
Hpy188I TCNGA 2 cut(s) 82, 94
Hpy188III TCNNGA 2 cut(s) 116, 135
HpyAV CCTTC 2 cut(s) 108, 114
LpnPI CCDG 2 cut(s) 45, 129
Lsp1109I GCAGC 1 cut(s) 36
MboII GAAGA 2 cut(s) 11, 131
MlyI GAGTC 1 cut(s) 25
MnlI CCTC 3 cut(s) 100, 120, 123
NlaIV GGNNCC 1 cut(s) 133
PkrI GCNGC 2 cut(s) 26, 34
PleI GAGTC 1 cut(s) 24
PpsI GAGTC 1 cut(s) 24
PspN4I GGNNCC 1 cut(s) 133
PspPI GGNCC 2 cut(s) 34, 132
SatI GCNGC 2 cut(s) 25, 33
Sau96I GGNCC 2 cut(s) 34, 132
SchI GAGTC 1 cut(s) 25
SetI ASST 1 cut(s) 100
SgeI CNNG 2 cut(s) 72, 128
SinI GGWCC 1 cut(s) 132
SsiI CCGC 1 cut(s) 32
TauI GCSGC 1 cut(s) 35
TseI GCWGC 1 cut(s) 24
VpaK11BI GGWCC 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.