Thioredoxin-like 4
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0138861 |
| rosa_multiflora | Rmu_sc0004359.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00313310 |
| rosa_rugosa | Rorug04G0083800 Rorug04G0160500 |
| rosa_samantha | Rh2CG371900 Rh4BG023300 Rh6BG022100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 143 |
| Alw26I | GTCTC | 1 cut(s) | 117 |
| AlwI | GGATC | 1 cut(s) | 143 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BccI | CCATC | 1 cut(s) | 86 |
| BcoDI | GTCTC | 1 cut(s) | 117 |
| BfaI | CTAG | 1 cut(s) | 120 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 1 cut(s) | 36 |
| Bse1I | ACTGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 53 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BslFI | GGGAC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 117 |
| BsmBI | CGTCTC | 1 cut(s) | 117 |
| BsmFI | GGGAC | 1 cut(s) | 53 |
| BsmI | GAATGC | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 135 |
| BspLI | GGNNCC | 1 cut(s) | 69 |
| BspPI | GGATC | 1 cut(s) | 143 |
| BsrI | ACTGG | 1 cut(s) | 53 |
| BssECI | CCNNGG | 1 cut(s) | 36 |
| BssMI | GATC | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 2 cut(s) | 67, 142 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstKTI | GATC | 1 cut(s) | 138 |
| BstMAI | GTCTC | 1 cut(s) | 117 |
| BstMBI | GATC | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| DpnI | GATC | 1 cut(s) | 137 |
| DpnII | GATC | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Esp3I | CGTCTC | 1 cut(s) | 117 |
| FaiI | YATR | 2 cut(s) | 8, 87 |
| FaqI | GGGAC | 1 cut(s) | 53 |
| FspBI | CTAG | 1 cut(s) | 120 |
| Hpy188I | TCNGA | 2 cut(s) | 37, 178 |
| HpyCH4III | ACNGT | 2 cut(s) | 67, 142 |
| HpyCH4V | TGCA | 2 cut(s) | 44, 170 |
| Kzo9I | GATC | 1 cut(s) | 135 |
| LpnPI | CCDG | 2 cut(s) | 34, 180 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MalI | GATC | 1 cut(s) | 137 |
| MboI | GATC | 1 cut(s) | 135 |
| MboII | GAAGA | 1 cut(s) | 67 |
| MluCI | AATT | 4 cut(s) | 12, 57, 147, 179 |
| MnlI | CCTC | 4 cut(s) | 31, 83, 121, 126 |
| MseI | TTAA | 2 cut(s) | 54, 60 |
| Mva1269I | GAATGC | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 135 |
| NlaIV | GGNNCC | 1 cut(s) | 69 |
| PctI | GAATGC | 1 cut(s) | 110 |
| PspN4I | GGNNCC | 1 cut(s) | 69 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| SaqAI | TTAA | 2 cut(s) | 54, 60 |
| Sau3AI | GATC | 1 cut(s) | 135 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 1 cut(s) | 42 |
| SgeI | CNNG | 6 cut(s) | 49, 61, 115, 132, 139, 179 |
| SinI | GGWCC | 1 cut(s) | 67 |
| Sse9I | AATT | 4 cut(s) | 12, 57, 147, 179 |
| SspMI | CTAG | 1 cut(s) | 120 |
| TaaI | ACNGT | 2 cut(s) | 67, 142 |
| TasI | AATT | 4 cut(s) | 12, 57, 147, 179 |
| Tru1I | TTAA | 2 cut(s) | 54, 60 |
| Tru9I | TTAA | 2 cut(s) | 54, 60 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| TspRI | CASTG | 1 cut(s) | 145 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 120 |