Fanconi anaemia protein FancD2 nuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14970 AT4G14970 AT4G14970 AT4G14970 AT4G14970 AT4G14970 |
| fragaria_vesca | FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 FvH4_6g39900 |
| malus_domestica | MD09G1135500.v1.1 |
| prunus_persica | Prupe.3G191100_v2.0.a1 Prupe.3G191100_v2.0.a1 |
| pyrus_communis | pycom09g05650 |
| rosa_chinensis | RchiOBHm_Chr2g0154431 |
| rosa_laevigata | RLG00000020777 |
| rosa_multiflora | Rmu_sc0003808.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00094340 |
| rosa_rugosa | Rorug02G0444300 |
| rosa_samantha | Rh2AG508900 Rh2BG520100 Rh2CG494300 Rh2DG530500 |
| rosa_wichuraiana | Rw2G041780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 365, 2537 |
| AarI | CACCTGC | 1 cut(s) | 3168 |
| Acc16I | TGCGCA | 1 cut(s) | 3440 |
| Acc36I | ACCTGC | 3 cut(s) | 687, 1489, 3168 |
| AccB1I | GGYRCC | 2 cut(s) | 234, 2551 |
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AccI | GTMKAC | 1 cut(s) | 264 |
| AccII | CGCG | 1 cut(s) | 90 |
| AccIII | TCCGGA | 1 cut(s) | 295 |
| AcoI | YGGCCR | 1 cut(s) | 2078 |
| AcsI | RAATTY | 6 cut(s) | 2192, 2690, 2900, 3365, 4174, 4189 |
| AcuI | CTGAAG | 6 cut(s) | 773, 1571, 3060, 3303, 3782, 4062 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 193, 244, 598, 3379, 3776 |
| AflII | CTTAAG | 1 cut(s) | 2936 |
| AflIII | ACRYGT | 2 cut(s) | 1170, 1762 |
| AhlI | ACTAGT | 2 cut(s) | 1234, 3847 |
| AjnI | CCWGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 252, 284, 581, 613, 1634, 1666, 2548, 2580 |
| AleI | CACNNNNGTG | 1 cut(s) | 3825 |
| Alw21I | GWGCWC | 4 cut(s) | 438, 1083, 3597, 3972 |
| Alw26I | GTCTC | 8 cut(s) | 161, 531, 816, 1187, 1280, 2088, 4051, 4313 |
| Alw44I | GTGCAC | 1 cut(s) | 3968 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 529 |
| Ama87I | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| Aor13HI | TCCGGA | 1 cut(s) | 295 |
| AoxI | GGCC | 9 cut(s) | 21, 49, 1149, 1422, 1534, 2078, 2542, 2667, 4153 |
| ApaLI | GTGCAC | 1 cut(s) | 3968 |
| ApeKI | GCWGC | 7 cut(s) | 1577, 1817, 2497, 2636, 2765, 2768, 3020 |
| ApoI | RAATTY | 6 cut(s) | 2192, 2690, 2900, 3365, 4174, 4189 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2576, 2608 |
| AseI | ATTAAT | 1 cut(s) | 1325 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 3093, 3171, 3804 |
| AspLEI | GCGC | 2 cut(s) | 3441, 3782 |
| AspS9I | GGNCC | 6 cut(s) | 50, 247, 1423, 1534, 2668, 2867 |
| AsuHPI | GGTGA | 8 cut(s) | 619, 1859, 1883, 2170, 2357, 2990, 3889, 4211 |
| AvaI | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| AvaII | GGWCC | 2 cut(s) | 247, 2867 |
| AxyI | CCTNAGG | 1 cut(s) | 924 |
| BaeGI | GKGCMC | 2 cut(s) | 1074, 3972 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2774, 2807 |
| BanI | GGYRCC | 2 cut(s) | 234, 2551 |
| BanII | GRGCYC | 3 cut(s) | 1083, 1253, 3597 |
| BbsI | GAAGAC | 3 cut(s) | 2337, 2411, 3122 |
| Bbv12I | GWGCWC | 4 cut(s) | 438, 1083, 3597, 3972 |
| BbvCI | CCTCAGC | 1 cut(s) | 149 |
| BbvI | GCAGC | 7 cut(s) | 1589, 1829, 2509, 2623, 2752, 2780, 3007 |
| BceAI | ACGGC | 1 cut(s) | 2065 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 693, 727, 4229, 4263 |
| BciT130I | CCWGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| BciVI | GTATCC | 2 cut(s) | 2136, 3204 |
| BclI | TGATCA | 3 cut(s) | 1054, 1683, 3810 |
| BcoDI | GTCTC | 8 cut(s) | 161, 531, 816, 1187, 1280, 2088, 4051, 4313 |
| BcuI | ACTAGT | 2 cut(s) | 1234, 3847 |
| BfaI | CTAG | 7 cut(s) | 357, 1235, 1254, 1568, 3164, 3338, 3848 |
| BfmI | CTRYAG | 3 cut(s) | 558, 2766, 3237 |
| BfrI | CTTAAG | 1 cut(s) | 2936 |
| BfuAI | ACCTGC | 3 cut(s) | 687, 1489, 3168 |
| BfuI | GTATCC | 2 cut(s) | 2136, 3204 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1430 |
| BglII | AGATCT | 4 cut(s) | 891, 1513, 2684, 4097 |
| BmcAI | AGTACT | 2 cut(s) | 2825, 3093 |
| Bme1390I | CCNGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| Bme18I | GGWCC | 2 cut(s) | 247, 2867 |
| BmeT110I | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| BmgT120I | GGNCC | 6 cut(s) | 50, 247, 1423, 1534, 2668, 2867 |
| BmiI | GGNNCC | 4 cut(s) | 236, 249, 2553, 4260 |
| BmrFI | CCNGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| BmrI | ACTGGG | 1 cut(s) | 2036 |
| BmsI | GCATC | 8 cut(s) | 417, 649, 654, 791, 835, 2008, 2471, 2752 |
| BmuI | ACTGGG | 1 cut(s) | 2036 |
| BpiI | GAAGAC | 3 cut(s) | 2337, 2411, 3122 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2282, 2314, 2284, 2316, 2405, 2437 |
| BpmI | CTGGAG | 2 cut(s) | 551, 2840 |
| Bpu10I | CCTNAGC | 1 cut(s) | 149 |
| BpuEI | CTTGAG | 4 cut(s) | 871, 935, 2881, 4075 |
| BsaAI | YACGTR | 2 cut(s) | 743, 1493 |
| BsaBI | GATNNNNATC | 6 cut(s) | 318, 324, 1590, 2337, 3495, 4281 |
| BsaI | GGTCTC | 2 cut(s) | 161, 1280 |
| BsaJI | CCNNGG | 6 cut(s) | 18, 307, 2664, 3230, 3615, 3891 |
| BsaWI | WCCGGW | 5 cut(s) | 295, 378, 2180, 2570, 4288 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3516, 3546 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 193, 244, 598, 3379, 3776 |
| Bse118I | RCCGGY | 1 cut(s) | 23 |
| Bse1I | ACTGG | 3 cut(s) | 2031, 2870, 3823 |
| Bse21I | CCTNAGG | 1 cut(s) | 924 |
| Bse3DI | GCAATG | 1 cut(s) | 1919 |
| Bse8I | GATNNNNATC | 6 cut(s) | 318, 324, 1590, 2337, 3495, 4281 |
| BseAI | TCCGGA | 1 cut(s) | 295 |
| BseBI | CCWGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| BseDI | CCNNGG | 6 cut(s) | 18, 307, 2664, 3230, 3615, 3891 |
| BseGI | GGATG | 8 cut(s) | 1507, 1595, 1863, 2320, 2892, 3493, 3595, 4173 |
| BseJI | GATNNNNATC | 6 cut(s) | 318, 324, 1590, 2337, 3495, 4281 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 193, 244, 598, 3379, 3776 |
| BseMI | GCAATG | 1 cut(s) | 1919 |
| BseNI | ACTGG | 3 cut(s) | 2031, 2870, 3823 |
| BseRI | GAGGAG | 4 cut(s) | 151, 1205, 2452, 4271 |
| BseSI | GKGCMC | 2 cut(s) | 1074, 3972 |
| BseXI | GCAGC | 7 cut(s) | 1589, 1829, 2509, 2623, 2752, 2780, 3007 |
| BsgI | GTGCAG | 4 cut(s) | 1376, 2792, 2976, 4128 |
| Bsh1236I | CGCG | 1 cut(s) | 90 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3770 |
| BshFI | GGCC | 9 cut(s) | 23, 51, 1151, 1424, 1536, 2080, 2544, 2669, 4155 |
| BshNI | GGYRCC | 2 cut(s) | 234, 2551 |
| BsiEI | CGRYCG | 1 cut(s) | 3770 |
| BsiHKAI | GWGCWC | 4 cut(s) | 438, 1083, 3597, 3972 |
| BsiHKCI | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| BslFI | GGGAC | 4 cut(s) | 233, 1558, 3247, 3940 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 193, 244, 598, 3379, 3776 |
| BsmAI | GTCTC | 8 cut(s) | 161, 531, 816, 1187, 1280, 2088, 4051, 4313 |
| BsmBI | CGTCTC | 1 cut(s) | 2088 |
| BsmFI | GGGAC | 4 cut(s) | 233, 1558, 3247, 3940 |
| BsmI | GAATGC | 2 cut(s) | 1062, 1164 |
| BsnI | GGCC | 9 cut(s) | 23, 51, 1151, 1424, 1536, 2080, 2544, 2669, 4155 |
| Bso31I | GGTCTC | 2 cut(s) | 161, 1280 |
| BsoBI | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| Bsp1286I | GDGCHC | 6 cut(s) | 438, 1074, 1083, 1253, 3597, 3972 |
| Bsp13I | TCCGGA | 1 cut(s) | 295 |
| Bsp1407I | TGTACA | 1 cut(s) | 2168 |
| Bsp19I | CCATGG | 2 cut(s) | 307, 3891 |
| BspANI | GGCC | 9 cut(s) | 23, 51, 1151, 1424, 1536, 2080, 2544, 2669, 4155 |
| BspEI | TCCGGA | 1 cut(s) | 295 |
| BspFNI | CGCG | 1 cut(s) | 90 |
| BspHI | TCATGA | 3 cut(s) | 1482, 3868, 4231 |
| BspLI | GGNNCC | 4 cut(s) | 236, 249, 2553, 4260 |
| BspMAI | CTGCAG | 2 cut(s) | 2770, 3241 |
| BspMI | ACCTGC | 3 cut(s) | 687, 1489, 3168 |
| BspQI | GCTCTTC | 2 cut(s) | 3509, 4137 |
| BspT107I | GGYRCC | 2 cut(s) | 234, 2551 |
| BspTI | CTTAAG | 1 cut(s) | 2936 |
| BspTNI | GGTCTC | 2 cut(s) | 161, 1280 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BsrDI | GCAATG | 1 cut(s) | 1919 |
| BsrFI | RCCGGY | 1 cut(s) | 23 |
| BsrGI | TGTACA | 1 cut(s) | 2168 |
| BsrI | ACTGG | 3 cut(s) | 2031, 2870, 3823 |
| BssAI | RCCGGY | 1 cut(s) | 23 |
| BssECI | CCNNGG | 6 cut(s) | 18, 307, 2664, 3230, 3615, 3891 |
| BssT1I | CCWWGG | 3 cut(s) | 307, 2664, 3891 |
| Bst2UI | CCWGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| Bst6I | CTCTTC | 7 cut(s) | 118, 540, 2313, 3509, 3708, 4137, 4302 |
| BstAFI | CTTAAG | 1 cut(s) | 2936 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 241 |
| BstAUI | TGTACA | 1 cut(s) | 2168 |
| BstBAI | YACGTR | 2 cut(s) | 743, 1493 |
| BstC8I | GCNNGC | 6 cut(s) | 1135, 3147, 3315, 3401, 3778, 3888 |
| BstDSI | CCRYGG | 2 cut(s) | 307, 3891 |
| BstEII | GGTNACC | 1 cut(s) | 3877 |
| BstF5I | GGATG | 8 cut(s) | 1507, 1595, 1863, 2320, 2892, 3493, 3595, 4173 |
| BstFNI | CGCG | 1 cut(s) | 90 |
| BstHHI | GCGC | 2 cut(s) | 3441, 3782 |
| BstMAI | GTCTC | 8 cut(s) | 161, 531, 816, 1187, 1280, 2088, 4051, 4313 |
| BstMCI | CGRYCG | 1 cut(s) | 3770 |
| BstNI | CCWGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| BstNSI | RCATGY | 7 cut(s) | 280, 1174, 1766, 2330, 3297, 3403, 3890 |
| BstPI | GGTNACC | 1 cut(s) | 3877 |
| BstSCI | CCNGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| BstSFI | CTRYAG | 3 cut(s) | 558, 2766, 3237 |
| BstSLI | GKGCMC | 2 cut(s) | 1074, 3972 |
| BstSNI | TACGTA | 1 cut(s) | 1493 |
| BstUI | CGCG | 1 cut(s) | 90 |
| BstV1I | GCAGC | 7 cut(s) | 1589, 1829, 2509, 2623, 2752, 2780, 3007 |
| BstV2I | GAAGAC | 3 cut(s) | 2337, 2411, 3122 |
| BstX2I | RGATCY | 6 cut(s) | 891, 1513, 2000, 2069, 2684, 4097 |
| BstYI | RGATCY | 6 cut(s) | 891, 1513, 2000, 2069, 2684, 4097 |
| Bsu36I | CCTNAGG | 1 cut(s) | 924 |
| BsuI | GTATCC | 2 cut(s) | 2136, 3204 |
| BsuRI | GGCC | 9 cut(s) | 23, 51, 1151, 1424, 1536, 2080, 2544, 2669, 4155 |
| BtgI | CCRYGG | 2 cut(s) | 307, 3891 |
| BtgZI | GCGATG | 1 cut(s) | 315 |
| BtsCI | GGATG | 8 cut(s) | 1507, 1595, 1863, 2320, 2892, 3493, 3595, 4173 |
| BtsI | GCAGTG | 2 cut(s) | 479, 4140 |
| BtsIMutI | CAGTG | 6 cut(s) | 479, 2379, 3112, 3830, 4140, 4252 |
| BveI | ACCTGC | 3 cut(s) | 687, 1489, 3168 |
| Cac8I | GCNNGC | 6 cut(s) | 1135, 3147, 3315, 3401, 3778, 3888 |
| CaiI | CAGNNNCTG | 1 cut(s) | 529 |
| CciI | TCATGA | 3 cut(s) | 1482, 3868, 4231 |
| CfoI | GCGC | 2 cut(s) | 3441, 3782 |
| Cfr10I | RCCGGY | 1 cut(s) | 23 |
| Cfr13I | GGNCC | 6 cut(s) | 50, 247, 1423, 1534, 2668, 2867 |
| CseI | GACGC | 2 cut(s) | 2736, 4322 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2491, 2526 |
| EaeI | YGGCCR | 1 cut(s) | 2078 |
| Eam1104I | CTCTTC | 7 cut(s) | 118, 540, 2313, 3509, 3708, 4137, 4302 |
| EarI | CTCTTC | 7 cut(s) | 118, 540, 2313, 3509, 3708, 4137, 4302 |
| EciI | GGCGGA | 1 cut(s) | 74 |
| Ecl136II | GAGCTC | 2 cut(s) | 1081, 3595 |
| Eco105I | TACGTA | 1 cut(s) | 1493 |
| Eco130I | CCWWGG | 3 cut(s) | 307, 2664, 3891 |
| Eco24I | GRGCYC | 3 cut(s) | 1083, 1253, 3597 |
| Eco31I | GGTCTC | 2 cut(s) | 161, 1280 |
| Eco32I | GATATC | 1 cut(s) | 2335 |
| Eco47I | GGWCC | 2 cut(s) | 247, 2867 |
| Eco53kI | GAGCTC | 2 cut(s) | 1081, 3595 |
| Eco57I | CTGAAG | 6 cut(s) | 773, 1571, 3060, 3303, 3782, 4062 |
| Eco81I | CCTNAGG | 1 cut(s) | 924 |
| Eco88I | CYCGRG | 3 cut(s) | 284, 813, 2393 |
| Eco91I | GGTNACC | 1 cut(s) | 3877 |
| EcoICRI | GAGCTC | 2 cut(s) | 1081, 3595 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2668 |
| EcoO65I | GGTNACC | 1 cut(s) | 3877 |
| EcoRI | GAATTC | 1 cut(s) | 2900 |
| EcoRII | CCWGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| EcoRV | GATATC | 1 cut(s) | 2335 |
| EcoT14I | CCWWGG | 3 cut(s) | 307, 2664, 3891 |
| EcoT22I | ATGCAT | 4 cut(s) | 412, 456, 784, 1064 |
| EcoT38I | GRGCYC | 3 cut(s) | 1083, 1253, 3597 |
| ErhI | CCWWGG | 3 cut(s) | 307, 2664, 3891 |
| Esp3I | CGTCTC | 1 cut(s) | 2088 |
| FaqI | GGGAC | 4 cut(s) | 233, 1558, 3247, 3940 |
| FauI | CCCGC | 1 cut(s) | 2521 |
| FauNDI | CATATG | 4 cut(s) | 669, 947, 1453, 2370 |
| FbaI | TGATCA | 3 cut(s) | 1054, 1683, 3810 |
| FblI | GTMKAC | 1 cut(s) | 264 |
| FokI | GGATG | 8 cut(s) | 1494, 1582, 1870, 2307, 2899, 3500, 3602, 4180 |
| FriOI | GRGCYC | 3 cut(s) | 1083, 1253, 3597 |
| FspBI | CTAG | 7 cut(s) | 357, 1235, 1254, 1568, 3164, 3338, 3848 |
| FspI | TGCGCA | 1 cut(s) | 3440 |
| GlaI | GCGC | 2 cut(s) | 3440, 3781 |
| GsuI | CTGGAG | 2 cut(s) | 551, 2840 |
| HaeIII | GGCC | 9 cut(s) | 23, 51, 1151, 1424, 1536, 2080, 2544, 2669, 4155 |
| HgaI | GACGC | 2 cut(s) | 2736, 4322 |
| HhaI | GCGC | 2 cut(s) | 3441, 3782 |
| Hin6I | GCGC | 2 cut(s) | 3439, 3780 |
| HinP1I | GCGC | 2 cut(s) | 3439, 3780 |
| HincII | GTYRAC | 4 cut(s) | 40, 265, 1989, 3853 |
| HindII | GTYRAC | 4 cut(s) | 40, 265, 1989, 3853 |
| HindIII | AAGCTT | 3 cut(s) | 290, 2231, 3803 |
| HpaI | GTTAAC | 1 cut(s) | 3853 |
| HphI | GGTGA | 8 cut(s) | 619, 1859, 1883, 2170, 2357, 2990, 3889, 4211 |
| Hpy99I | CGWCG | 1 cut(s) | 256 |
| HpyCH4IV | ACGT | 2 cut(s) | 742, 1492 |
| HpySE526I | ACGT | 2 cut(s) | 742, 1492 |
| HspAI | GCGC | 2 cut(s) | 3439, 3780 |
| Kpn2I | TCCGGA | 1 cut(s) | 295 |
| Ksp22I | TGATCA | 3 cut(s) | 1054, 1683, 3810 |
| KspAI | GTTAAC | 1 cut(s) | 3853 |
| LguI | GCTCTTC | 2 cut(s) | 3509, 4137 |
| LmnI | GCTCC | 7 cut(s) | 87, 143, 664, 1078, 2432, 3257, 4258 |
| Lsp1109I | GCAGC | 7 cut(s) | 1589, 1829, 2509, 2623, 2752, 2780, 3007 |
| LweI | GCATC | 8 cut(s) | 417, 649, 654, 791, 835, 2008, 2471, 2752 |
| MaeI | CTAG | 7 cut(s) | 357, 1235, 1254, 1568, 3164, 3338, 3848 |
| MaeII | ACGT | 2 cut(s) | 742, 1492 |
| MaeIII | GTNAC | 7 cut(s) | 1237, 2621, 2775, 2964, 3324, 3349, 3877 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MfeI | CAATTG | 3 cut(s) | 654, 1977, 2281 |
| MflI | RGATCY | 6 cut(s) | 891, 1513, 2000, 2069, 2684, 4097 |
| MhlI | GDGCHC | 6 cut(s) | 438, 1074, 1083, 1253, 3597, 3972 |
| MlyI | GAGTC | 6 cut(s) | 545, 1540, 1649, 2609, 3332, 3859 |
| MmeI | TCCRAC | 2 cut(s) | 3360, 3491 |
| Mph1103I | ATGCAT | 4 cut(s) | 412, 456, 784, 1064 |
| MroI | TCCGGA | 1 cut(s) | 295 |
| MroXI | GAANNNNTTC | 3 cut(s) | 3093, 3171, 3804 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1169, 1173, 1347, 2325, 2885, 3825 |
| MspA1I | CMGCKG | 2 cut(s) | 153, 2771 |
| MspCI | CTTAAG | 1 cut(s) | 2936 |
| MspR9I | CCNGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| MunI | CAATTG | 3 cut(s) | 654, 1977, 2281 |
| Mva1269I | GAATGC | 2 cut(s) | 1062, 1164 |
| MvaI | CCWGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| MvnI | CGCG | 1 cut(s) | 90 |
| NcoI | CCATGG | 2 cut(s) | 307, 3891 |
| NdeI | CATATG | 4 cut(s) | 669, 947, 1453, 2370 |
| NlaIV | GGNNCC | 4 cut(s) | 236, 249, 2553, 4260 |
| NmeAIII | GCCGAG | 2 cut(s) | 43, 533 |
| NmuCI | GTSAC | 3 cut(s) | 2621, 3324, 3877 |
| NsbI | TGCGCA | 1 cut(s) | 3440 |
| NsiI | ATGCAT | 4 cut(s) | 412, 456, 784, 1064 |
| NspI | RCATGY | 7 cut(s) | 280, 1174, 1766, 2330, 3297, 3403, 3890 |
| OliI | CACNNNNGTG | 1 cut(s) | 3825 |
| PaeI | GCATGC | 2 cut(s) | 3403, 3890 |
| PaeR7I | CTCGAG | 2 cut(s) | 284, 2393 |
| PagI | TCATGA | 3 cut(s) | 1482, 3868, 4231 |
| PaqCI | CACCTGC | 1 cut(s) | 3168 |
| PciI | ACATGT | 2 cut(s) | 1170, 1762 |
| PciSI | GCTCTTC | 2 cut(s) | 3509, 4137 |
| PctI | GAATGC | 2 cut(s) | 1062, 1164 |
| PdmI | GAANNNNTTC | 3 cut(s) | 3093, 3171, 3804 |
| PfoI | TCCNGGA | 2 cut(s) | 2833, 3417 |
| PleI | GAGTC | 6 cut(s) | 545, 1540, 1649, 2608, 3331, 3859 |
| PpsI | GAGTC | 6 cut(s) | 545, 1540, 1649, 2608, 3331, 3859 |
| Ppu21I | YACGTR | 2 cut(s) | 743, 1493 |
| PscI | ACATGT | 2 cut(s) | 1170, 1762 |
| PshBI | ATTAAT | 1 cut(s) | 1325 |
| PsiI | TTATAA | 2 cut(s) | 365, 2537 |
| Psp124BI | GAGCTC | 2 cut(s) | 1083, 3597 |
| Psp6I | CCWGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| PspEI | GGTNACC | 1 cut(s) | 3877 |
| PspGI | CCWGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| PspN4I | GGNNCC | 4 cut(s) | 236, 249, 2553, 4260 |
| PspPI | GGNCC | 6 cut(s) | 50, 247, 1423, 1534, 2668, 2867 |
| PspXI | VCTCGAGB | 1 cut(s) | 2393 |
| PstI | CTGCAG | 2 cut(s) | 2770, 3241 |
| PstNI | CAGNNNCTG | 1 cut(s) | 529 |
| PsuI | RGATCY | 6 cut(s) | 891, 1513, 2000, 2069, 2684, 4097 |
| PvuII | CAGCTG | 1 cut(s) | 2771 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1169, 1173, 1347, 2325, 2885, 3825 |
| SacI | GAGCTC | 2 cut(s) | 1083, 3597 |
| SalI | GTCGAC | 1 cut(s) | 263 |
| SapI | GCTCTTC | 2 cut(s) | 3509, 4137 |
| Sau96I | GGNCC | 6 cut(s) | 50, 247, 1423, 1534, 2668, 2867 |
| ScaI | AGTACT | 2 cut(s) | 2825, 3093 |
| SchI | GAGTC | 6 cut(s) | 545, 1540, 1649, 2609, 3332, 3859 |
| ScrFI | CCNGG | 8 cut(s) | 1153, 2705, 2835, 3126, 3231, 3419, 3557, 3617 |
| SduI | GDGCHC | 6 cut(s) | 438, 1074, 1083, 1253, 3597, 3972 |
| SfaNI | GCATC | 8 cut(s) | 417, 649, 654, 791, 835, 2008, 2471, 2752 |
| SfcI | CTRYAG | 3 cut(s) | 558, 2766, 3237 |
| Sfr274I | CTCGAG | 2 cut(s) | 284, 2393 |
| SinI | GGWCC | 2 cut(s) | 247, 2867 |
| SlaI | CTCGAG | 2 cut(s) | 284, 2393 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1169, 1173, 1347, 2325, 2885, 3825 |
| SmlI | CTYRAG | 7 cut(s) | 284, 850, 914, 2393, 2860, 2936, 4054 |
| SmoI | CTYRAG | 7 cut(s) | 284, 850, 914, 2393, 2860, 2936, 4054 |
| SnaBI | TACGTA | 1 cut(s) | 1493 |
| SpeI | ACTAGT | 2 cut(s) | 1234, 3847 |
| SphI | GCATGC | 2 cut(s) | 3403, 3890 |
| SspI | AATATT | 1 cut(s) | 3245 |
| SspMI | CTAG | 7 cut(s) | 357, 1235, 1254, 1568, 3164, 3338, 3848 |
| SstI | GAGCTC | 2 cut(s) | 1083, 3597 |
| StyD4I | CCNGG | 8 cut(s) | 1151, 2703, 2833, 3124, 3229, 3417, 3555, 3615 |
| StyI | CCWWGG | 3 cut(s) | 307, 2664, 3891 |
| TaiI | ACGT | 2 cut(s) | 745, 1495 |
| TaqI | TCGA | 8 cut(s) | 254, 264, 285, 387, 440, 587, 713, 2394 |
| TaqII | GACCGA | 2 cut(s) | 1425, 3784 |
| TatI | WGTACW | 5 cut(s) | 2168, 2823, 3049, 3091, 3532 |
| TauI | GCSGC | 3 cut(s) | 90, 3570, 4155 |
| TscAI | CASTG | 6 cut(s) | 486, 2386, 3112, 3830, 4147, 4252 |
| TseFI | GTSAC | 3 cut(s) | 2621, 3324, 3877 |
| TseI | GCWGC | 7 cut(s) | 1577, 1817, 2497, 2636, 2765, 2768, 3020 |
| Tsp45I | GTSAC | 3 cut(s) | 2621, 3324, 3877 |
| TspGWI | ACGGA | 3 cut(s) | 45, 3362, 3423 |
| TspRI | CASTG | 6 cut(s) | 486, 2386, 3112, 3830, 4147, 4252 |
| Vha464I | CTTAAG | 1 cut(s) | 2936 |
| VneI | GTGCAC | 1 cut(s) | 3968 |
| VpaK11BI | GGWCC | 2 cut(s) | 247, 2867 |
| VspI | ATTAAT | 1 cut(s) | 1325 |
| XapI | RAATTY | 6 cut(s) | 2192, 2690, 2900, 3365, 4174, 4189 |
| XbaI | TCTAGA | 1 cut(s) | 3337 |
| XceI | RCATGY | 7 cut(s) | 280, 1174, 1766, 2330, 3297, 3403, 3890 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1297, 3623 |
| XhoI | CTCGAG | 2 cut(s) | 284, 2393 |
| XmiI | GTMKAC | 1 cut(s) | 264 |
| XmnI | GAANNNNTTC | 3 cut(s) | 3093, 3171, 3804 |
| XspI | CTAG | 7 cut(s) | 357, 1235, 1254, 1568, 3164, 3338, 3848 |
| ZrmI | AGTACT | 2 cut(s) | 2825, 3093 |
| Zsp2I | ATGCAT | 4 cut(s) | 412, 456, 784, 1064 |