ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0329231 |
| rosa_laevigata | RLG00000029908 |
| rosa_multiflora | Rmu_sc0000156.1_g000010 Rmu_sc0014673.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00140680 Rroxscaffold_4G00278730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 164 |
| Acc36I | ACCTGC | 1 cut(s) | 164 |
| AciI | CCGC | 2 cut(s) | 55, 171 |
| AfaI | GTAC | 1 cut(s) | 197 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 119 |
| AgsI | TTSAA | 1 cut(s) | 250 |
| AjnI | CCWGG | 2 cut(s) | 186, 240 |
| AluBI | AGCT | 1 cut(s) | 43 |
| AluI | AGCT | 1 cut(s) | 43 |
| Alw26I | GTCTC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 2 cut(s) | 95, 188 |
| AvaII | GGWCC | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 6 |
| BciT130I | CCWGG | 2 cut(s) | 188, 242 |
| BcoDI | GTCTC | 1 cut(s) | 135 |
| BfuAI | ACCTGC | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 2 cut(s) | 188, 242 |
| Bme18I | GGWCC | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 1 cut(s) | 110 |
| BmrFI | CCNGG | 2 cut(s) | 188, 242 |
| BmsI | GCATC | 1 cut(s) | 97 |
| BpmI | CTGGAG | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 1 cut(s) | 241 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 132, 162 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bse1I | ACTGG | 1 cut(s) | 32 |
| BseBI | CCWGG | 2 cut(s) | 188, 242 |
| BseDI | CCNNGG | 1 cut(s) | 241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 32 |
| BseRI | GAGGAG | 1 cut(s) | 153 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BsmAI | GTCTC | 1 cut(s) | 135 |
| BspACI | CCGC | 2 cut(s) | 55, 171 |
| BspMI | ACCTGC | 1 cut(s) | 164 |
| BsrI | ACTGG | 1 cut(s) | 32 |
| BssECI | CCNNGG | 1 cut(s) | 241 |
| Bst2UI | CCWGG | 2 cut(s) | 188, 242 |
| Bst4CI | ACNGT | 2 cut(s) | 132, 146 |
| BstC8I | GCNNGC | 3 cut(s) | 57, 61, 260 |
| BstMAI | GTCTC | 1 cut(s) | 135 |
| BstNI | CCWGG | 2 cut(s) | 188, 242 |
| BstSCI | CCNGG | 2 cut(s) | 186, 240 |
| BveI | ACCTGC | 1 cut(s) | 164 |
| Cac8I | GCNNGC | 3 cut(s) | 57, 61, 260 |
| Cfr13I | GGNCC | 1 cut(s) | 110 |
| Csp6I | GTAC | 1 cut(s) | 196 |
| CviAII | CATG | 2 cut(s) | 204, 265 |
| CviJI | RGCY | 2 cut(s) | 43, 59 |
| CviKI_1 | RGCY | 2 cut(s) | 43, 59 |
| CviQI | GTAC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 2 cut(s) | 186, 240 |
| FaeI | CATG | 2 cut(s) | 207, 268 |
| FaiI | YATR | 4 cut(s) | 7, 52, 205, 266 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 27, 59, 242, 274 |
| FatI | CATG | 2 cut(s) | 203, 264 |
| FauI | CCCGC | 1 cut(s) | 48 |
| GsuI | CTGGAG | 1 cut(s) | 209 |
| Hin1II | CATG | 2 cut(s) | 207, 268 |
| HindIII | AAGCTT | 1 cut(s) | 41 |
| HinfI | GANTC | 1 cut(s) | 69 |
| HphI | GGTGA | 2 cut(s) | 95, 188 |
| Hpy166II | GTNNAC | 2 cut(s) | 128, 196 |
| Hpy188III | TCNNGA | 1 cut(s) | 250 |
| Hpy8I | GTNNAC | 2 cut(s) | 128, 196 |
| HpyAV | CCTTC | 2 cut(s) | 10, 15 |
| HpyCH4III | ACNGT | 2 cut(s) | 132, 146 |
| HpyCH4V | TGCA | 1 cut(s) | 102 |
| Hsp92II | CATG | 2 cut(s) | 207, 268 |
| LpnPI | CCDG | 8 cut(s) | 13, 91, 159, 173, 200, 227, 254, 271 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MluCI | AATT | 1 cut(s) | 105 |
| MnlI | CCTC | 3 cut(s) | 90, 131, 184 |
| MseI | TTAA | 1 cut(s) | 272 |
| MspR9I | CCNGG | 2 cut(s) | 188, 242 |
| MvaI | CCWGG | 2 cut(s) | 188, 242 |
| NlaIII | CATG | 2 cut(s) | 207, 268 |
| PaqCI | CACCTGC | 1 cut(s) | 164 |
| PfeI | GAWTC | 1 cut(s) | 69 |
| Psp6I | CCWGG | 2 cut(s) | 186, 240 |
| PspGI | CCWGG | 2 cut(s) | 186, 240 |
| PspPI | GGNCC | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 197 |
| RsaNI | GTAC | 1 cut(s) | 196 |
| SaqAI | TTAA | 1 cut(s) | 272 |
| Sau96I | GGNCC | 1 cut(s) | 110 |
| ScrFI | CCNGG | 2 cut(s) | 188, 242 |
| SetI | ASST | 6 cut(s) | 45, 101, 178, 189, 195, 278 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| SinI | GGWCC | 1 cut(s) | 110 |
| Sse9I | AATT | 1 cut(s) | 105 |
| SsiI | CCGC | 2 cut(s) | 55, 171 |
| StyD4I | CCNGG | 2 cut(s) | 186, 240 |
| TaaI | ACNGT | 2 cut(s) | 132, 146 |
| TasI | AATT | 1 cut(s) | 105 |
| TatI | WGTACW | 1 cut(s) | 195 |
| TfiI | GAWTC | 1 cut(s) | 69 |
| Tru1I | TTAA | 1 cut(s) | 272 |
| Tru9I | TTAA | 1 cut(s) | 272 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| VpaK11BI | GGWCC | 1 cut(s) | 110 |