RchiOBHm_Chr1g0365011

Leukocyte receptor cluster

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0009843
Physical Location & Seq
Forward (+)
56045257 .. 56054474
9218 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3024 bp
ATGATGATGAATCAAGGAGGCAATGCTCAGACCATTGCTGCTGTCGACCCCAATTCGCTTGAGAATCGCCATGTTGTTAATGGGAACCAAGGACAGACGCCGTCATATTTTCCATCAACAACTGGGTCGGAAGCGTCGGCATGGCCAACTCATCGGGTGGAGAATAGCTCCACGGAAAATGGGATTCATTCTCATTCAGCTTATCAATATAATCAGCATACACAGCCACCTGCAAGTAGCTCGTCCAGTTTGGGAACAGTGAATGCACCACAAGATTACAGTACCTATGCGTCATACCCAAATCCTGCTGATCCATATGGTTATGGAAGTGCGGGATACCAAGGTTACTATAACAACTATCAGCAGCAACCCAATCAGTCCTACTCACAACCCGTAGGAGCATATCAAAATACAGGTGCTCCTTATCAGCCTATTTCCTCATTTCAGAATACAGGGTCTTATGCTGGGTCTGCAAGTTATTCAAGCACTTACTACAATCCTGCTGATTATCAGACTGCTGGAGGCTATGCAAGTAGCGGTTACACTAATCAGACTAATCAGACCACTGCTTGGAATGGTGGAAATTATGCAAACTATACCTCTCAACAATATGCACCCTACACTCCAGAAACTCCTGGTGTATATAGTTCTGCTACTGCAACTTCAACCCCACAAAATTATCAGCAGCATTATAAGCAATGGGCAGATTATTACAATCAAACAGAAGTCAGTTGTGCTCCTGGGACTGAGAACTTATCTGTTACTAGTACACAGAATGTAGGATGTCCCGTTCCAGGTGTCACCACTGGGTATCAAACCTCAAACAGCCAGCCACCACCTTCATACACTCCTGCATGGAGGCCAGAATCTAGTTCATCTGAATTACCATCGGTGCAGTCTGGTGCTGTAGTTGGTGGTTCTCATGATGCTTACTGGAATCATGTGGCTCCTACTTCGCAATCTCAAATTCAACATATTTCTCCTATTCAAGCACAATTTCAAAAGCCTTTGGATCAAAAAACTTCTTATGATAGCTTTCAGGACCAACAAAAAACTGCAACTTCTCAAGCATCAAGCATTCAGTATCCTGCTTCTCAGCAGCTGCCATATGTGTCTCATAGTTACCAAACACCTTCACAAGCTGTTCCATCTATAGATACACAAAGAGTAAACAAACTGCAGATTCCAACGAACCCTAGAATCACTTCAAATATGACTTTGGGTTTACGAAAAACTGACAAGGATATAAATACAACCAGTCCAGCAGGAAAACCTGCTTACATTAGTGTTTCACTGCCAAAACCGGTTGAGAAGGTGCCATCCAGTGCTAGTGCTGATTCTCTGCTTAAGACTGGTATGTTCCCCAAGTCACTGCGTGGTTATGTTGAAAGGGCTTTGGCTCGCTGTAAAGACGATAGCCAGATGGCTGCCTGTCAGGTTGTCATGAAGGAGATCATCACCAAGGCAACAGCTGATAGCACACTTTACACACGAGACTGGGATACTGAGCCTCTTTTCCCCCTCCCAAATGAAGATGCTACAAATAAAGAGTTAAATTCTTCAAACCGTGTTTCATCATTGGCAAAGTTTAAAAGAAGTCCAAGTAGGCGATCCAAGAGTAGATGGGAACCTTTACCAGAGGAGAAGTCAGAGAAGTCCGTTGAAAGGCCAGCCTCTTTAAATAGCGGTGGTCTAAACTATGCTGCTTGGGGACATGTCAATGATAAGGAGAGAAAGCCATTGTTGTGGAGTGCTGGGAGTAAGAATGATAATATGAGTAGTGCAAAGTTTCCTTCACTGGAGCAGAAAAGTGCAAGTAAGATAACCCAAAAGCCGTTTAAGAGGCAGCGCCTTTCTGATGGGGTAGGTGCTACTGAGAATGGTGATGCATCTAGTGATAGTGATGCAGAACAAGGTTTAGCAGCCTACTACGCGGGAGCAATTGCCCTTGCAGATTCACCAGAGGAAAGAAAGAGACGTGAACATCGCTCTAAGCGTTTTGAAAAAGTGCAAGGACATCGAGGACAAAATAATCACTTCAAACCTAAAAATGCTGGTGCTGGGAGCTTGTATAATAGAAGAGCTAATGCCTTGGTGCTCAGCAAAAATTTTGAAGATGGCGCTAGCAGGGCTGTTGAAGACATTGACTGGGATTCTCTTACTGTCAAGGGGACCTGCCAAGAAATTGAGAAACGTTATTTGCGCCTCACTTCTGCACCTGATCCTGCCACTGTTAGGCCGGAGGATGTTCTTGAAAAAGCTTTGCTTATGGTACAAAATTCTCAGAAGAATTACCTATATAAATGCGATCAGCTGAAGTCCATTCGCCAGGATTTGACTGTGCAACGAATTCGAAATCAGCTAACAGTAAAGGTGTATGAAACTCATGCTCGGTTAGCATTGGAAGTTGGAGACCTGCCAGAATATAATCAGTGCCAGTCACAGTTGAAGTCGCTCTATGCTGATGGTATTGAGGGATGTCATATGGAGTTTTCTGCGTACAACTTGCTTTGTGTTATCCTGCACTCAAATAATAACAGAGATCTGTTATCATCAATGGCAAGCTTGTCAGATGAAACAAAAAAGCATGAAGCTGTCAAACATGCCCTTGCAGTTCGAGCTGCTGTGACTTCGGGAAATTATGTCATGTTCTTCAGGCTCTACAAGACAGCTCCCAACTTAAGCACCTGCCTTATGGATCTTTATGTTGAAAAGATGCGGTTTAAGGCAGTGAGCTGCATGTGCCGATCATATCGGCCCACAATACCTGTTTCATATGTTGCTCAAATTCTGGGGTTTACACCCACAAATGAGGAAAGTGGGGAGAAGGATTCAGAGGGATTGGAGGAATGCATTGAATGGTTGAAACTACATGGTGCATGCCTTGCTGCAGATAACAATGGGGAAATGCAGCTTGATGCAAAGTCTACTTCTTCTAGTCTTTATATGCCAGAGACTGATGCTGTGTCCCATGGAGATGCCAATCTCGCTGTTAATGATTTTTTTACACGGACACCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAC3_GANP

Protein Analysis

1007

Amino Acids

110.8

Weight (kDa)

6.88

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAC3_GANP PF03399 733 - 937 1.7e-25 SAC3/GANP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 693
AarI CACCTGC 2 cut(s) 238, 2696
Acc36I ACCTGC 5 cut(s) 238, 1282, 2183, 2424, 2696
AccB1I GGYRCC 1 cut(s) 1315
AccB7I CCANNNNNTGG 1 cut(s) 570
AccI GTMKAC 2 cut(s) 45, 2927
AccII CGCG 1 cut(s) 1934
AciI CCGC 5 cut(s) 332, 537, 1686, 1934, 2719
AclI AACGTT 1 cut(s) 2194
AclWI GGATC 5 cut(s) 305, 1020, 1605, 2216, 2706
AcoI YGGCCR 1 cut(s) 143
AcsI RAATTY 6 cut(s) 966, 1555, 2107, 2278, 2349, 2787
AcuI CTGAAG 2 cut(s) 2336, 2638
AcyI GRCGYC 1 cut(s) 98
AdeI CACNNNGTG 1 cut(s) 1376
AfaI GTAC 4 cut(s) 283, 769, 2274, 2501
AfiI CCNNNNNNNGG 4 cut(s) 570, 794, 1665, 2235
AflII CTTAAG 2 cut(s) 1346, 2680
AflIII ACRYGT 1 cut(s) 1714
AgeI ACCGGT 1 cut(s) 1303
AhlI ACTAGT 1 cut(s) 764
AjiI CACGTC 1 cut(s) 1979
AjnI CCWGG 4 cut(s) 634, 739, 793, 2328
AloI GAACNNNNNNTCC 2 cut(s) 774, 806
Alw21I GWGCWC 3 cut(s) 421, 739, 2100
Alw26I GTCTC 5 cut(s) 1119, 1488, 1969, 2406, 2948
AlwI GGATC 5 cut(s) 305, 1020, 1605, 2216, 2706
AlwNI CAGNNNCTG 2 cut(s) 1102, 2957
AoxI GGCC 5 cut(s) 143, 860, 1667, 2237, 2756
ApoI RAATTY 6 cut(s) 966, 1555, 2107, 2278, 2349, 2787
AsiGI ACCGGT 1 cut(s) 1303
Asp700I GAANNNNTTC 1 cut(s) 1204
AspLEI GCGC 3 cut(s) 1851, 2123, 2205
AspS9I GGNCC 3 cut(s) 1042, 2172, 2757
AsuHPI GGTGA 4 cut(s) 793, 1450, 1895, 1950
AsuII TTCGAA 1 cut(s) 2353
AsuNHI GCTAGC 1 cut(s) 2123
AvaII GGWCC 2 cut(s) 1042, 2172
BaeI ACNNNNGTAYC 2 cut(s) 328, 361
BalI TGGCCA 1 cut(s) 145
BanI GGYRCC 1 cut(s) 1315
BauI CACGAG 1 cut(s) 1491
BbsI GAAGAC 1 cut(s) 2145
Bbv12I GWGCWC 3 cut(s) 421, 739, 2100
BccI CCATC 9 cut(s) 121, 895, 1156, 1327, 1417, 1617, 1853, 2111, 2459
BceAI ACGGC 2 cut(s) 85, 1819
BcgI CGANNNNNNTGC 6 cut(s) 222, 256, 2000, 2034, 2333, 2367
BciT130I CCWGG 4 cut(s) 636, 741, 795, 2330
BciVI GTATCC 3 cut(s) 329, 1095, 1495
BcoDI GTCTC 5 cut(s) 1119, 1488, 1969, 2406, 2948
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 7 cut(s) 765, 870, 1197, 1329, 1893, 2124, 2937
BfmI CTRYAG 4 cut(s) 906, 1152, 1178, 2889
BfoI RGCGCY 2 cut(s) 1852, 2124
BfrI CTTAAG 2 cut(s) 1346, 2680
BfuAI ACCTGC 5 cut(s) 238, 1282, 2183, 2424, 2696
BfuI GTATCC 3 cut(s) 329, 1095, 1495
BglII AGATCT 1 cut(s) 2542
BlpI GCTNAGC 1 cut(s) 2099
Bme1390I CCNGG 4 cut(s) 636, 741, 795, 2330
Bme18I GGWCC 2 cut(s) 1042, 2172
BmgBI CACGTC 1 cut(s) 1979
BmgT120I GGNCC 3 cut(s) 1042, 2172, 2757
BmiI GGNNCC 5 cut(s) 86, 948, 1317, 1629, 2173
BmrFI CCNGG 4 cut(s) 636, 741, 795, 2330
BmrI ACTGGG 4 cut(s) 132, 816, 1507, 2158
BmtI GCTAGC 1 cut(s) 2127
BmuI ACTGGG 4 cut(s) 132, 816, 1507, 2158
BpiI GAAGAC 1 cut(s) 2145
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 3 cut(s) 540, 609, 1820
Bpu1102I GCTNAGC 1 cut(s) 2099
Bpu14I TTCGAA 1 cut(s) 2353
BpuEI CTTGAG 2 cut(s) 80, 1050
BsaBI GATNNNNATC 1 cut(s) 2982
BsaHI GRCGYC 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 2406
BsaJI CCNNGG 7 cut(s) 88, 171, 340, 740, 1461, 2091, 2971
BsaWI WCCGGW 1 cut(s) 1303
BsaXI ACNNNNNCTCC 2 cut(s) 403, 433
Bsc4I CCNNNNNNNGG 4 cut(s) 570, 794, 1665, 2235
Bse118I RCCGGY 1 cut(s) 1303
Bse3DI GCAATG 3 cut(s) 28, 33, 704
Bse8I GATNNNNATC 1 cut(s) 2982
BseBI CCWGG 4 cut(s) 636, 741, 795, 2330
BseDI CCNNGG 7 cut(s) 88, 171, 340, 740, 1461, 2091, 2971
BseGI GGATG 4 cut(s) 788, 1319, 2251, 2483
BseJI GATNNNNATC 1 cut(s) 2982
BseLI CCNNNNNNNGG 4 cut(s) 570, 794, 1665, 2235
BseMI GCAATG 3 cut(s) 28, 33, 704
BseMII CTCAG 7 cut(s) 41, 738, 1109, 1497, 1866, 2113, 2297
BseRI GAGGAG 1 cut(s) 1655
BseYI CCCAGC 3 cut(s) 464, 1754, 2060
BsgI GTGCAG 3 cut(s) 914, 2199, 2507
Bsh1236I CGCG 1 cut(s) 1934
BshFI GGCC 5 cut(s) 145, 862, 1669, 2239, 2758
BshNI GGYRCC 1 cut(s) 1315
BshTI ACCGGT 1 cut(s) 1303
BsiHKAI GWGCWC 3 cut(s) 421, 739, 2100
BsiSI CCGG 2 cut(s) 1304, 2240
BslFI GGGAC 5 cut(s) 757, 771, 1725, 2185, 2953
BslI CCNNNNNNNGG 4 cut(s) 570, 794, 1665, 2235
BsmAI GTCTC 5 cut(s) 1119, 1488, 1969, 2406, 2948
BsmBI CGTCTC 1 cut(s) 1969
BsmFI GGGAC 5 cut(s) 757, 771, 1725, 2185, 2953
BsmI GAATGC 3 cut(s) 268, 1077, 2855
BsnI GGCC 5 cut(s) 145, 862, 1669, 2239, 2758
Bso31I GGTCTC 1 cut(s) 2406
Bsp119I TTCGAA 1 cut(s) 2353
Bsp1286I GDGCHC 3 cut(s) 421, 739, 2100
Bsp143I GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
Bsp1720I GCTNAGC 1 cut(s) 2099
Bsp19I CCATGG 1 cut(s) 2971
BspACI CCGC 5 cut(s) 332, 537, 1686, 1934, 2719
BspANI GGCC 5 cut(s) 145, 862, 1669, 2239, 2758
BspCNI CTCAG 7 cut(s) 40, 739, 1108, 1498, 1867, 2112, 2296
BspFNI CGCG 1 cut(s) 1934
BspHI TCATGA 2 cut(s) 922, 1443
BspLI GGNNCC 5 cut(s) 86, 948, 1317, 1629, 2173
BspMAI CTGCAG 2 cut(s) 1182, 2893
BspMI ACCTGC 5 cut(s) 238, 1282, 2183, 2424, 2696
BspOI GCTAGC 1 cut(s) 2127
BspPI GGATC 5 cut(s) 305, 1020, 1605, 2216, 2706
BspQI GCTCTTC 1 cut(s) 2074
BspT104I TTCGAA 1 cut(s) 2353
BspT107I GGYRCC 1 cut(s) 1315
BspTI CTTAAG 2 cut(s) 1346, 2680
BspTNI GGTCTC 1 cut(s) 2406
BsrDI GCAATG 3 cut(s) 28, 33, 704
BsrFI RCCGGY 1 cut(s) 1303
BssAI RCCGGY 1 cut(s) 1303
BssECI CCNNGG 7 cut(s) 88, 171, 340, 740, 1461, 2091, 2971
BssMI GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
BssNI GRCGYC 1 cut(s) 98
BssSI CACGAG 1 cut(s) 1491
BssT1I CCWWGG 5 cut(s) 88, 340, 1461, 2091, 2971
Bst2BI CACGAG 1 cut(s) 1491
Bst2UI CCWGG 4 cut(s) 636, 741, 795, 2330
Bst4CI ACNGT 8 cut(s) 259, 281, 1568, 2164, 2233, 2341, 2368, 2445
Bst6I CTCTTC 1 cut(s) 2074
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 2 cut(s) 1346, 2680
BstAPI GCANNNNNTGC 1 cut(s) 2885
BstBI TTCGAA 1 cut(s) 2353
BstC8I GCNNGC 6 cut(s) 830, 1402, 1671, 2125, 2563, 2881
BstDEI CTNAG 8 cut(s) 27, 747, 1095, 1506, 1875, 1992, 2099, 2283
BstDSI CCRYGG 2 cut(s) 171, 2971
BstF5I GGATG 4 cut(s) 788, 1319, 2251, 2483
BstFNI CGCG 1 cut(s) 1934
BstH2I RGCGCY 2 cut(s) 1852, 2124
BstHHI GCGC 3 cut(s) 1851, 2123, 2205
BstKTI GATC 9 cut(s) 313, 1015, 1455, 1613, 2224, 2311, 2545, 2701, 2750
BstMAI GTCTC 5 cut(s) 1119, 1488, 1969, 2406, 2948
BstMBI GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
BstNI CCWGG 4 cut(s) 636, 741, 795, 2330
BstNSI RCATGY 4 cut(s) 1718, 2606, 2743, 2883
BstSCI CCNGG 4 cut(s) 634, 739, 793, 2328
BstSFI CTRYAG 4 cut(s) 906, 1152, 1178, 2889
BstUI CGCG 1 cut(s) 1934
BstV2I GAAGAC 1 cut(s) 2145
BstX2I RGATCY 2 cut(s) 2542, 2698
BstXI CCANNNNNNTGG 1 cut(s) 1746
BstYI RGATCY 2 cut(s) 2542, 2698
BsuI GTATCC 3 cut(s) 329, 1095, 1495
BsuRI GGCC 5 cut(s) 145, 862, 1669, 2239, 2758
BtgI CCRYGG 2 cut(s) 171, 2971
BtgZI GCGATG 1 cut(s) 1970
BtrI CACGTC 1 cut(s) 1979
BtsCI GGATG 4 cut(s) 788, 1319, 2251, 2483
BtsI GCAGTG 4 cut(s) 564, 1292, 1370, 2736
BveI ACCTGC 5 cut(s) 238, 1282, 2183, 2424, 2696
Cac8I GCNNGC 6 cut(s) 830, 1402, 1671, 2125, 2563, 2881
CaiI CAGNNNCTG 2 cut(s) 1102, 2957
CciI TCATGA 2 cut(s) 922, 1443
CfoI GCGC 3 cut(s) 1851, 2123, 2205
Cfr10I RCCGGY 1 cut(s) 1303
Cfr13I GGNCC 3 cut(s) 1042, 2172, 2757
CseI GACGC 3 cut(s) 106, 123, 279
Csp6I GTAC 4 cut(s) 282, 768, 2273, 2500
CspAI ACCGGT 1 cut(s) 1303
CviQI GTAC 4 cut(s) 282, 768, 2273, 2500
DdeI CTNAG 8 cut(s) 27, 747, 1095, 1506, 1875, 1992, 2099, 2283
DpnI GATC 9 cut(s) 312, 1014, 1454, 1612, 2223, 2310, 2544, 2700, 2749
DpnII GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
DraI TTTAAA 2 cut(s) 1591, 1680
DraIII CACNNNGTG 1 cut(s) 1376
EaeI YGGCCR 1 cut(s) 143
Eam1104I CTCTTC 1 cut(s) 2074
EarI CTCTTC 1 cut(s) 2074
Eco130I CCWWGG 5 cut(s) 88, 340, 1461, 2091, 2971
Eco31I GGTCTC 1 cut(s) 2406
Eco47I GGWCC 2 cut(s) 1042, 2172
Eco57I CTGAAG 2 cut(s) 2336, 2638
EcoO109I RGGNCCY 1 cut(s) 2172
EcoRI GAATTC 1 cut(s) 2349
EcoRII CCWGG 4 cut(s) 634, 739, 793, 2328
EcoT14I CCWWGG 5 cut(s) 88, 340, 1461, 2091, 2971
EcoT22I ATGCAT 2 cut(s) 1891, 2855
ErhI CCWWGG 5 cut(s) 88, 340, 1461, 2091, 2971
Esp3I CGTCTC 1 cut(s) 1969
FalI AAGNNNNNCTT 2 cut(s) 2250, 2282
FaqI GGGAC 5 cut(s) 757, 771, 1725, 2185, 2953
FauI CCCGC 2 cut(s) 325, 1927
FauNDI CATATG 4 cut(s) 316, 1108, 2484, 2776
FblI GTMKAC 2 cut(s) 45, 2927
FokI GGATG 4 cut(s) 795, 1306, 2258, 2490
FspBI CTAG 7 cut(s) 765, 870, 1197, 1329, 1893, 2124, 2937
GlaI GCGC 3 cut(s) 1850, 2122, 2204
GsaI CCCAGC 3 cut(s) 468, 1758, 2064
GsuI CTGGAG 3 cut(s) 540, 609, 1820
HaeII RGCGCY 2 cut(s) 1852, 2124
HaeIII GGCC 5 cut(s) 145, 862, 1669, 2239, 2758
HapII CCGG 2 cut(s) 1304, 2240
HgaI GACGC 3 cut(s) 106, 123, 279
HhaI GCGC 3 cut(s) 1851, 2123, 2205
Hin1I GRCGYC 1 cut(s) 98
Hin6I GCGC 3 cut(s) 1849, 2121, 2203
HinP1I GCGC 3 cut(s) 1849, 2121, 2203
HincII GTYRAC 1 cut(s) 46
HindII GTYRAC 1 cut(s) 46
HindIII AAGCTT 2 cut(s) 2259, 2563
HpaII CCGG 2 cut(s) 1304, 2240
HphI GGTGA 4 cut(s) 793, 1450, 1895, 1950
Hpy166II GTNNAC 7 cut(s) 46, 770, 1171, 1226, 1982, 2799, 2928
Hpy188III TCNNGA 6 cut(s) 626, 923, 1040, 1444, 2252, 2634
Hpy8I GTNNAC 7 cut(s) 46, 770, 1171, 1226, 1982, 2799, 2928
Hpy99I CGWCG 1 cut(s) 139
HpyAV CCTTC 6 cut(s) 849, 1143, 1306, 1441, 1803, 2821
HpyCH4III ACNGT 8 cut(s) 259, 281, 1568, 2164, 2233, 2341, 2368, 2445
HpyCH4IV ACGT 2 cut(s) 1978, 2194
HpyF3I CTNAG 8 cut(s) 27, 747, 1095, 1506, 1875, 1992, 2099, 2283
HpySE526I ACGT 2 cut(s) 1978, 2194
Hsp92I GRCGYC 1 cut(s) 98
HspAI GCGC 3 cut(s) 1849, 2121, 2203
Kzo9I GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
LguI GCTCTTC 1 cut(s) 2074
LmnI GCTCC 9 cut(s) 173, 398, 424, 742, 952, 1801, 1937, 2064, 2677
MaeI CTAG 7 cut(s) 765, 870, 1197, 1329, 1893, 2124, 2937
MaeII ACGT 2 cut(s) 1978, 2194
MaeIII GTNAC 8 cut(s) 344, 539, 760, 799, 1121, 1368, 2439, 2626
MalI GATC 9 cut(s) 312, 1014, 1454, 1612, 2223, 2310, 2544, 2700, 2749
MboI GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
MboII GAAGA 8 cut(s) 1544, 1551, 2091, 2126, 2150, 2299, 2644, 2925
MfeI CAATTG 1 cut(s) 1941
MflI RGATCY 2 cut(s) 2542, 2698
MhlI GDGCHC 3 cut(s) 421, 739, 2100
MlsI TGGCCA 1 cut(s) 145
MluNI TGGCCA 1 cut(s) 145
MmeI TCCRAC 3 cut(s) 108, 1211, 2389
Mox20I TGGCCA 1 cut(s) 145
Mph1103I ATGCAT 2 cut(s) 1891, 2855
MroXI GAANNNNTTC 1 cut(s) 1204
MscI TGGCCA 1 cut(s) 145
MseI TTAA 9 cut(s) 78, 1347, 1553, 1590, 1679, 1839, 2681, 2724, 2994
MslI CAYNNNNRTG 3 cut(s) 1719, 1744, 2976
Msp20I TGGCCA 1 cut(s) 145
MspA1I CMGCKG 3 cut(s) 1102, 1472, 2314
MspCI CTTAAG 2 cut(s) 1346, 2680
MspI CCGG 2 cut(s) 1304, 2240
MspR9I CCNGG 4 cut(s) 636, 741, 795, 2330
MunI CAATTG 1 cut(s) 1941
Mva1269I GAATGC 3 cut(s) 268, 1077, 2855
MvaI CCWGG 4 cut(s) 636, 741, 795, 2330
MvnI CGCG 1 cut(s) 1934
NcoI CCATGG 1 cut(s) 2971
NdeI CATATG 4 cut(s) 316, 1108, 2484, 2776
NdeII GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
NheI GCTAGC 1 cut(s) 2123
NlaIV GGNNCC 5 cut(s) 86, 948, 1317, 1629, 2173
NmuCI GTSAC 4 cut(s) 799, 1368, 2439, 2626
NsiI ATGCAT 2 cut(s) 1891, 2855
NspI RCATGY 4 cut(s) 1718, 2606, 2743, 2883
NspV TTCGAA 1 cut(s) 2353
PaeI GCATGC 1 cut(s) 2883
PagI TCATGA 2 cut(s) 922, 1443
PaqCI CACCTGC 2 cut(s) 238, 2696
PciI ACATGT 1 cut(s) 1714
PciSI GCTCTTC 1 cut(s) 2074
PcsI WCGNNNNNNNCGW 1 cut(s) 1993
PctI GAATGC 3 cut(s) 268, 1077, 2855
PdmI GAANNNNTTC 1 cut(s) 1204
PflFI GACNNNGTC 1 cut(s) 100
PflMI CCANNNNNTGG 1 cut(s) 570
PinAI ACCGGT 1 cut(s) 1303
PpuMI RGGWCCY 1 cut(s) 2172
PscI ACATGT 1 cut(s) 1714
PsiI TTATAA 1 cut(s) 693
Psp1406I AACGTT 1 cut(s) 2194
Psp5II RGGWCCY 1 cut(s) 2172
Psp6I CCWGG 4 cut(s) 634, 739, 793, 2328
PspFI CCCAGC 3 cut(s) 464, 1754, 2060
PspGI CCWGG 4 cut(s) 634, 739, 793, 2328
PspN4I GGNNCC 5 cut(s) 86, 948, 1317, 1629, 2173
PspPI GGNCC 3 cut(s) 1042, 2172, 2757
PspPPI RGGWCCY 1 cut(s) 2172
PstI CTGCAG 2 cut(s) 1182, 2893
PstNI CAGNNNCTG 2 cut(s) 1102, 2957
PsuI RGATCY 2 cut(s) 2542, 2698
PsyI GACNNNGTC 1 cut(s) 100
PvuII CAGCTG 3 cut(s) 1102, 1472, 2314
RsaI GTAC 4 cut(s) 283, 769, 2274, 2501
RsaNI GTAC 4 cut(s) 282, 768, 2273, 2500
RseI CAYNNNNRTG 3 cut(s) 1719, 1744, 2976
SalI GTCGAC 1 cut(s) 44
SapI GCTCTTC 1 cut(s) 2074
SaqAI TTAA 9 cut(s) 78, 1347, 1553, 1590, 1679, 1839, 2681, 2724, 2994
Sau3AI GATC 9 cut(s) 310, 1012, 1452, 1610, 2221, 2308, 2542, 2698, 2747
Sau96I GGNCC 3 cut(s) 1042, 2172, 2757
ScrFI CCNGG 4 cut(s) 636, 741, 795, 2330
SduI GDGCHC 3 cut(s) 421, 739, 2100
SfcI CTRYAG 4 cut(s) 906, 1152, 1178, 2889
SfuI TTCGAA 1 cut(s) 2353
SinI GGWCC 2 cut(s) 1042, 2172
SmiMI CAYNNNNRTG 3 cut(s) 1719, 1744, 2976
SmlI CTYRAG 4 cut(s) 59, 1065, 1346, 2680
SmoI CTYRAG 4 cut(s) 59, 1065, 1346, 2680
SpeI ACTAGT 1 cut(s) 764
SphI GCATGC 1 cut(s) 2883
SsiI CCGC 5 cut(s) 332, 537, 1686, 1934, 2719
SspMI CTAG 7 cut(s) 765, 870, 1197, 1329, 1893, 2124, 2937
StyD4I CCNGG 4 cut(s) 634, 739, 793, 2328
StyI CCWWGG 5 cut(s) 88, 340, 1461, 2091, 2971
TaaI ACNGT 8 cut(s) 259, 281, 1568, 2164, 2233, 2341, 2368, 2445
TaiI ACGT 2 cut(s) 1981, 2197
TaqI TCGA 4 cut(s) 45, 2020, 2353, 2617
TatI WGTACW 1 cut(s) 767
Tru1I TTAA 9 cut(s) 78, 1347, 1553, 1590, 1679, 1839, 2681, 2724, 2994
Tru9I TTAA 9 cut(s) 78, 1347, 1553, 1590, 1679, 1839, 2681, 2724, 2994
TseFI GTSAC 4 cut(s) 799, 1368, 2439, 2626
Tsp45I GTSAC 4 cut(s) 799, 1368, 2439, 2626
TspGWI ACGGA 2 cut(s) 188, 1648
Tth111I GACNNNGTC 1 cut(s) 100
Van91I CCANNNNNTGG 1 cut(s) 570
Vha464I CTTAAG 2 cut(s) 1346, 2680
VpaK11BI GGWCC 2 cut(s) 1042, 2172
XapI RAATTY 6 cut(s) 966, 1555, 2107, 2278, 2349, 2787
XceI RCATGY 4 cut(s) 1718, 2606, 2743, 2883
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmiI GTMKAC 2 cut(s) 45, 2927
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 7 cut(s) 765, 870, 1197, 1329, 1893, 2124, 2937
Zsp2I ATGCAT 2 cut(s) 1891, 2855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.