Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom08g18780 |
| rosa_chinensis | RchiOBHm_Chr1g0379121 |
| rosa_laevigata | RLG00000016230 |
| rosa_multiflora | Rmu_sc0002407.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00149990 |
| rosa_samantha | Rh2AG063300 Rh2DG062800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 8 |
| Acc36I | ACCTGC | 1 cut(s) | 140 |
| AflIII | ACRYGT | 1 cut(s) | 57 |
| AgsI | TTSAA | 2 cut(s) | 188, 237 |
| AjnI | CCWGG | 1 cut(s) | 202 |
| AluBI | AGCT | 3 cut(s) | 95, 141, 182 |
| AluI | AGCT | 3 cut(s) | 95, 141, 182 |
| BccI | CCATC | 1 cut(s) | 70 |
| BciT130I | CCWGG | 1 cut(s) | 204 |
| BfaI | CTAG | 2 cut(s) | 90, 195 |
| BfuAI | ACCTGC | 1 cut(s) | 140 |
| Bme1390I | CCNGG | 1 cut(s) | 204 |
| BmiI | GGNNCC | 1 cut(s) | 221 |
| BmrFI | CCNGG | 1 cut(s) | 204 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| BsaJI | CCNNGG | 1 cut(s) | 202 |
| BseBI | CCWGG | 1 cut(s) | 204 |
| BseDI | CCNNGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 81 |
| BspLI | GGNNCC | 1 cut(s) | 221 |
| BspMI | ACCTGC | 1 cut(s) | 140 |
| BssECI | CCNNGG | 1 cut(s) | 202 |
| Bst2UI | CCWGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 1 cut(s) | 241 |
| BstF5I | GGATG | 1 cut(s) | 81 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 23 |
| BstNI | CCWGG | 1 cut(s) | 204 |
| BstNSI | RCATGY | 1 cut(s) | 61 |
| BstSCI | CCNGG | 1 cut(s) | 202 |
| BtsCI | GGATG | 1 cut(s) | 81 |
| BveI | ACCTGC | 1 cut(s) | 140 |
| CviAII | CATG | 2 cut(s) | 58, 132 |
| CviJI | RGCY | 7 cut(s) | 17, 89, 95, 141, 169, 182, 220 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 89, 95, 141, 169, 182, 220 |
| EcoRII | CCWGG | 1 cut(s) | 202 |
| FaeI | CATG | 2 cut(s) | 61, 135 |
| FaiI | YATR | 7 cut(s) | 8, 21, 59, 110, 133, 156, 244 |
| FatI | CATG | 2 cut(s) | 57, 131 |
| FokI | GGATG | 1 cut(s) | 88 |
| FspBI | CTAG | 2 cut(s) | 90, 195 |
| Hin1II | CATG | 2 cut(s) | 61, 135 |
| HincII | GTYRAC | 1 cut(s) | 55 |
| HindII | GTYRAC | 1 cut(s) | 55 |
| HindIII | AAGCTT | 1 cut(s) | 180 |
| HinfI | GANTC | 1 cut(s) | 209 |
| HpaI | GTTAAC | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4III | ACNGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 2 cut(s) | 42, 149 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 23 |
| Hsp92II | CATG | 2 cut(s) | 61, 135 |
| KspAI | GTTAAC | 1 cut(s) | 55 |
| LmnI | GCTCC | 1 cut(s) | 225 |
| LpnPI | CCDG | 4 cut(s) | 57, 135, 189, 216 |
| MaeI | CTAG | 2 cut(s) | 90, 195 |
| MaeIII | GTNAC | 2 cut(s) | 127, 157 |
| MluCI | AATT | 1 cut(s) | 43 |
| MmeI | TCCRAC | 1 cut(s) | 156 |
| MnlI | CCTC | 3 cut(s) | 79, 118, 210 |
| MseI | TTAA | 1 cut(s) | 54 |
| MslI | CAYNNNNRTG | 1 cut(s) | 37 |
| MspR9I | CCNGG | 1 cut(s) | 204 |
| MvaI | CCWGG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 23 |
| NlaIII | CATG | 2 cut(s) | 61, 135 |
| NlaIV | GGNNCC | 1 cut(s) | 221 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| NspI | RCATGY | 1 cut(s) | 61 |
| PciI | ACATGT | 1 cut(s) | 57 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| PscI | ACATGT | 1 cut(s) | 57 |
| PsiI | TTATAA | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 202 |
| PspGI | CCWGG | 1 cut(s) | 202 |
| PspN4I | GGNNCC | 1 cut(s) | 221 |
| RseI | CAYNNNNRTG | 1 cut(s) | 37 |
| SaqAI | TTAA | 1 cut(s) | 54 |
| ScrFI | CCNGG | 1 cut(s) | 204 |
| SetI | ASST | 5 cut(s) | 97, 129, 143, 154, 184 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 37 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| Sse9I | AATT | 1 cut(s) | 43 |
| SspMI | CTAG | 2 cut(s) | 90, 195 |
| StyD4I | CCNGG | 1 cut(s) | 202 |
| TaaI | ACNGT | 1 cut(s) | 241 |
| TasI | AATT | 1 cut(s) | 43 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| Tru1I | TTAA | 1 cut(s) | 54 |
| Tru9I | TTAA | 1 cut(s) | 54 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| XceI | RCATGY | 1 cut(s) | 61 |
| XspI | CTAG | 2 cut(s) | 90, 195 |