ATP-dependent RNA helicase SUPV3L1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342501 |
| rosa_multiflora | Rmu_sc0009535.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00313070 |
| rosa_samantha | Rh5BG052000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 663 |
| AccB1I | GGYRCC | 1 cut(s) | 395 |
| AccBSI | CCGCTC | 1 cut(s) | 539 |
| AciI | CCGC | 2 cut(s) | 482, 539 |
| AcsI | RAATTY | 6 cut(s) | 47, 132, 430, 455, 586, 730 |
| AcuI | CTGAAG | 1 cut(s) | 281 |
| AfaI | GTAC | 1 cut(s) | 79 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 158, 324 |
| AflII | CTTAAG | 1 cut(s) | 286 |
| AgeI | ACCGGT | 1 cut(s) | 221 |
| AgsI | TTSAA | 3 cut(s) | 324, 359, 586 |
| AluBI | AGCT | 2 cut(s) | 681, 720 |
| AluI | AGCT | 2 cut(s) | 681, 720 |
| Alw26I | GTCTC | 1 cut(s) | 299 |
| ApeKI | GCWGC | 1 cut(s) | 746 |
| ApoI | RAATTY | 6 cut(s) | 47, 132, 430, 455, 586, 730 |
| AsiGI | ACCGGT | 1 cut(s) | 221 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 529 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 197, 230 |
| BanI | GGYRCC | 1 cut(s) | 395 |
| BauI | CACGAG | 1 cut(s) | 174 |
| BbsI | GAAGAC | 1 cut(s) | 17 |
| BbvI | GCAGC | 1 cut(s) | 733 |
| BccI | CCATC | 3 cut(s) | 136, 381, 560 |
| BclI | TGATCA | 1 cut(s) | 442 |
| BcoDI | GTCTC | 1 cut(s) | 299 |
| BfaI | CTAG | 1 cut(s) | 751 |
| BfmI | CTRYAG | 1 cut(s) | 309 |
| BfrI | CTTAAG | 1 cut(s) | 286 |
| BfuAI | ACCTGC | 1 cut(s) | 663 |
| BglII | AGATCT | 1 cut(s) | 282 |
| BisI | GCNGC | 1 cut(s) | 747 |
| BlsI | GCNGC | 1 cut(s) | 748 |
| BmiI | GGNNCC | 2 cut(s) | 220, 397 |
| BmsI | GCATC | 2 cut(s) | 469, 564 |
| BpiI | GAAGAC | 1 cut(s) | 17 |
| BpmI | CTGGAG | 1 cut(s) | 323 |
| BsaWI | WCCGGW | 2 cut(s) | 221, 406 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 158, 324 |
| Bse118I | RCCGGY | 1 cut(s) | 221 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 158, 324 |
| BseXI | GCAGC | 1 cut(s) | 733 |
| BshNI | GGYRCC | 1 cut(s) | 395 |
| BshTI | ACCGGT | 1 cut(s) | 221 |
| BsiSI | CCGG | 2 cut(s) | 222, 407 |
| BslFI | GGGAC | 2 cut(s) | 38, 666 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 158, 324 |
| BsmAI | GTCTC | 1 cut(s) | 299 |
| BsmFI | GGGAC | 2 cut(s) | 38, 666 |
| Bsp1407I | TGTACA | 1 cut(s) | 77 |
| Bsp143I | GATC | 4 cut(s) | 282, 442, 595, 609 |
| BspACI | CCGC | 2 cut(s) | 482, 539 |
| BspHI | TCATGA | 1 cut(s) | 723 |
| BspLI | GGNNCC | 2 cut(s) | 220, 397 |
| BspMI | ACCTGC | 1 cut(s) | 663 |
| BspQI | GCTCTTC | 1 cut(s) | 529 |
| BspT107I | GGYRCC | 1 cut(s) | 395 |
| BspTI | CTTAAG | 1 cut(s) | 286 |
| BsrBI | CCGCTC | 1 cut(s) | 539 |
| BsrFI | RCCGGY | 1 cut(s) | 221 |
| BsrGI | TGTACA | 1 cut(s) | 77 |
| BssAI | RCCGGY | 1 cut(s) | 221 |
| BssMI | GATC | 4 cut(s) | 282, 442, 595, 609 |
| BssSI | CACGAG | 1 cut(s) | 174 |
| Bst2BI | CACGAG | 1 cut(s) | 174 |
| Bst4CI | ACNGT | 2 cut(s) | 82, 310 |
| Bst6I | CTCTTC | 1 cut(s) | 529 |
| BstAFI | CTTAAG | 1 cut(s) | 286 |
| BstAUI | TGTACA | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 2 cut(s) | 426, 718 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 322 |
| BstKTI | GATC | 4 cut(s) | 285, 445, 598, 612 |
| BstMAI | GTCTC | 1 cut(s) | 299 |
| BstMBI | GATC | 4 cut(s) | 282, 442, 595, 609 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 536, 678, 743 |
| BstSFI | CTRYAG | 1 cut(s) | 309 |
| BstV1I | GCAGC | 1 cut(s) | 733 |
| BstV2I | GAAGAC | 1 cut(s) | 17 |
| BstX2I | RGATCY | 1 cut(s) | 282 |
| BstYI | RGATCY | 1 cut(s) | 282 |
| BtgZI | GCGATG | 1 cut(s) | 359 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| BveI | ACCTGC | 1 cut(s) | 663 |
| Cac8I | GCNNGC | 2 cut(s) | 426, 718 |
| CciI | TCATGA | 1 cut(s) | 723 |
| Cfr10I | RCCGGY | 1 cut(s) | 221 |
| Csp6I | GTAC | 1 cut(s) | 78 |
| CspAI | ACCGGT | 1 cut(s) | 221 |
| CviAII | CATG | 3 cut(s) | 68, 153, 724 |
| CviJI | RGCY | 4 cut(s) | 189, 197, 681, 720 |
| CviKI_1 | RGCY | 4 cut(s) | 189, 197, 681, 720 |
| CviQI | GTAC | 1 cut(s) | 78 |
| DpnI | GATC | 4 cut(s) | 284, 444, 597, 611 |
| DpnII | GATC | 4 cut(s) | 282, 442, 595, 609 |
| Eam1104I | CTCTTC | 1 cut(s) | 529 |
| EarI | CTCTTC | 1 cut(s) | 529 |
| Eco57I | CTGAAG | 1 cut(s) | 281 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 322 |
| FaeI | CATG | 3 cut(s) | 71, 156, 727 |
| FaiI | YATR | 8 cut(s) | 69, 111, 154, 237, 249, 366, 393, 725 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 639, 671 |
| FaqI | GGGAC | 2 cut(s) | 38, 666 |
| FatI | CATG | 3 cut(s) | 67, 152, 723 |
| FauI | CCCGC | 1 cut(s) | 532 |
| FbaI | TGATCA | 1 cut(s) | 442 |
| Fnu4HI | GCNGC | 1 cut(s) | 747 |
| Fsp4HI | GCNGC | 1 cut(s) | 747 |
| FspBI | CTAG | 1 cut(s) | 751 |
| GluI | GCNGC | 1 cut(s) | 747 |
| GsuI | CTGGAG | 1 cut(s) | 323 |
| HapII | CCGG | 2 cut(s) | 222, 407 |
| Hin1II | CATG | 3 cut(s) | 71, 156, 727 |
| HincII | GTYRAC | 1 cut(s) | 96 |
| HindII | GTYRAC | 1 cut(s) | 96 |
| HinfI | GANTC | 1 cut(s) | 499 |
| HpaII | CCGG | 2 cut(s) | 222, 407 |
| HphI | GGTGA | 2 cut(s) | 236, 529 |
| Hpy166II | GTNNAC | 2 cut(s) | 96, 171 |
| Hpy188I | TCNGA | 3 cut(s) | 138, 498, 546 |
| Hpy188III | TCNNGA | 5 cut(s) | 302, 511, 563, 599, 724 |
| Hpy8I | GTNNAC | 2 cut(s) | 96, 171 |
| HpyCH4III | ACNGT | 2 cut(s) | 82, 310 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 688 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 536, 678, 743 |
| Hsp92II | CATG | 3 cut(s) | 71, 156, 727 |
| Ksp22I | TGATCA | 1 cut(s) | 442 |
| Kzo9I | GATC | 4 cut(s) | 282, 442, 595, 609 |
| LguI | GCTCTTC | 1 cut(s) | 529 |
| Lsp1109I | GCAGC | 1 cut(s) | 733 |
| LweI | GCATC | 2 cut(s) | 469, 564 |
| MaeI | CTAG | 1 cut(s) | 751 |
| MaeIII | GTNAC | 1 cut(s) | 705 |
| MalI | GATC | 4 cut(s) | 284, 444, 597, 611 |
| MbiI | CCGCTC | 1 cut(s) | 539 |
| MboI | GATC | 4 cut(s) | 282, 442, 595, 609 |
| MboII | GAAGA | 2 cut(s) | 17, 546 |
| MflI | RGATCY | 1 cut(s) | 282 |
| MluCI | AATT | 7 cut(s) | 47, 132, 430, 455, 586, 730, 741 |
| MmeI | TCCRAC | 1 cut(s) | 524 |
| MnlI | CCTC | 6 cut(s) | 152, 246, 325, 334, 507, 542 |
| MseI | TTAA | 6 cut(s) | 191, 287, 345, 438, 450, 642 |
| MslI | CAYNNNNRTG | 1 cut(s) | 213 |
| MspCI | CTTAAG | 1 cut(s) | 286 |
| MspI | CCGG | 2 cut(s) | 222, 407 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 536, 678, 743 |
| NdeII | GATC | 4 cut(s) | 282, 442, 595, 609 |
| NlaIII | CATG | 3 cut(s) | 71, 156, 727 |
| NlaIV | GGNNCC | 2 cut(s) | 220, 397 |
| PagI | TCATGA | 1 cut(s) | 723 |
| PciSI | GCTCTTC | 1 cut(s) | 529 |
| PfeI | GAWTC | 1 cut(s) | 499 |
| PinAI | ACCGGT | 1 cut(s) | 221 |
| PkrI | GCNGC | 1 cut(s) | 748 |
| PspN4I | GGNNCC | 2 cut(s) | 220, 397 |
| PsuI | RGATCY | 1 cut(s) | 282 |
| RsaI | GTAC | 1 cut(s) | 79 |
| RsaNI | GTAC | 1 cut(s) | 78 |
| RseI | CAYNNNNRTG | 1 cut(s) | 213 |
| SapI | GCTCTTC | 1 cut(s) | 529 |
| SaqAI | TTAA | 6 cut(s) | 191, 287, 345, 438, 450, 642 |
| SatI | GCNGC | 1 cut(s) | 747 |
| Sau3AI | GATC | 4 cut(s) | 282, 442, 595, 609 |
| SetI | ASST | 9 cut(s) | 163, 257, 301, 336, 345, 631, 677, 683, 722 |
| SfaNI | GCATC | 2 cut(s) | 469, 564 |
| SfcI | CTRYAG | 1 cut(s) | 309 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 213 |
| SmlI | CTYRAG | 1 cut(s) | 286 |
| SmoI | CTYRAG | 1 cut(s) | 286 |
| Sse9I | AATT | 7 cut(s) | 47, 132, 430, 455, 586, 730, 741 |
| SsiI | CCGC | 2 cut(s) | 482, 539 |
| SspMI | CTAG | 1 cut(s) | 751 |
| TaaI | ACNGT | 2 cut(s) | 82, 310 |
| TaqI | TCGA | 1 cut(s) | 612 |
| TasI | AATT | 7 cut(s) | 47, 132, 430, 455, 586, 730, 741 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TfiI | GAWTC | 1 cut(s) | 499 |
| Tru1I | TTAA | 6 cut(s) | 191, 287, 345, 438, 450, 642 |
| Tru9I | TTAA | 6 cut(s) | 191, 287, 345, 438, 450, 642 |
| TscAI | CASTG | 1 cut(s) | 87 |
| TseI | GCWGC | 1 cut(s) | 746 |
| TspDTI | ATGAA | 4 cut(s) | 144, 468, 651, 712 |
| TspRI | CASTG | 1 cut(s) | 87 |
| Vha464I | CTTAAG | 1 cut(s) | 286 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 322 |
| XapI | RAATTY | 6 cut(s) | 47, 132, 430, 455, 586, 730 |
| XspI | CTAG | 1 cut(s) | 751 |