Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013987

Physical Location & Seq

Genomic Coordinates Forward (+)

48422385 .. 48425114

Gene Structure 2730 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58127

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGCGTCGAGGAAGCAAGGGCGGAGCTTCCCGTCGATCACGCGGTGCGACACCAGCGAAACGGCGTCGTACGAGTCCATCGCGGCCGATCTCGACGGCACTCTCCTCATCTCCCGCAGCTCCTTCCCTTACTTCATGCTCGTCGCAATCGAAGCCGGCAGCCTCCTCCGCGGCTTCGTGCTTCTTCTCTCTCTTCCGCTCGTCATCGTCTCGTACCTCTTCGTCTCCGAAGCCCTCGGCATCCAGATCCTCATCTTCATCTCCTTCGCCGGCCTTAAAGTCCGCGACATCGAGCTAGCCTCACGCGCCGTCCTCCCCAGGTTTTACGCGGCGGATGTGAGGGCGGAGAGCTTCGAGGTGTTCGACAAGTGCAAGAGGAAGGTGGTGGTCACGGCGAATCCGACGCTGATGGTGGAGCCGTTCGTGAAGGATTTTCTCGGCGGAGATAAGGTGCTCGGCACTGAGATCGAGGTGAATCCGAAGACGAAGAAGGCGACTGGTTTTGTGAAGAAGCCGGGGGTTTTGGTAGGGAAGTTGAAGCGTGCGGCTATTGAGAAGGAGTTCGGAAATGAAGTGCCGGAACTTGGGATCGGAGACCGGAGCTCCGATCACGATTTCATGGCTATTTGCAAGGAAGGCTACATGGTTCCCCCAAGCAAATCAGCACGCCCAGTCCCGTCGGACCGCCTAAAAAACCGGCTCATCTTCCACGACGGCCGCCTCGTCCAGCGCCCCGACCCACTCAACGCCATCATTACCTATCTCTGGCTCCCATTCGCCTTCGTCCTTTGCATTATGCGCGTCTACATCAACCTCCCCCTCCCCGAAAGCATCGTTCCCTACACCTACGCCATGCTCGGAATCAAGCTCAAAATCCGCGGCAACCGCCCCCCACCACCTTCCCCAGGCACACCAGGAAACCTCTACGTCTGCAACCACCGCACCGCCCTCGACCCCATCATCATTGCCATTGCCCTAGGCCGCAAAGTCTCGTGTGTCTCCTACAGCGTCAGCCGCCTCTCTCGGTTCCTCTCCCCCATCCCCACCATCGCTCTCTCCCGCGACCGTGAGGCTGACGCTGCTCGCCTCACCGCCCTTCTCCAAAAGGGCGACCTCGTCGTGTGTCCGGAAGGCACCACGTGCCGGGAGCCGTTCCTGCTTCGTTTCAGTGCTTTATTCGCAGAAATGAGCGATAGGATCGTCCCGGTGGCGATGGACTGTAAGCAGAGCATGTTCTACGGCACCACCGTGAGAGGTGTTAAGTTTTGGGACCCGTACTTCTTCTTCATGAACCCAAGGCCGACTTACGAGGCGACGTTTCTCGACCGGCTGCCGGACGACATGTCGTGCAAGGCGGGGAAGTCGGCAATCGAGGTGGCGAACTACGTGCAGAAGGTGCTGGGTGATGTGCTGGGGTTTGAGCGCACTGGGTTAACTAGAAAGGACAAGTACTTGTTGCTGGGGGGAAATGACGGAAAGGTGGAGTCCATGTACAACGGGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009987 GO:0010143 GO:0012505 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0090447 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase HAD

Protein Analysis

502

Amino Acids

55.72

Weight (kDa)

9.31

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAD_RAM2_N	PF23270	27 - 216	7.5e-63	Glycerol-3-phosphate acyltransferase RAM2-like, HAD-like domain
HAD	PF12710	28 - 207	1.4e-21	haloacid dehalogenase-like hydrolase
Acyltransferase	PF01553	305 - 405	1.9e-07	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013987)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01610 AT4G00400
fragaria_vesca	FvH4_7g14440
malus_domestica	MD07G1136200.v1.1
prunus_persica	Prupe.2G171400_v2.0.a1 Prupe.2G171400_v2.0.a1
pyrus_communis	pycom07g13350
rosa_chinensis	RchiOBHm_Chr1g0355841
rosa_laevigata	RLG00000028126
rosa_multiflora	Rmu_sc0002284.1_g000011 Rmu_sc0004705.1_g000024
rosa_roxburghii	Rroxscaffold_4G00299980
rosa_rugosa	Rorug01G0248100
rosa_samantha	Rh1BG230400 Rh1CG244100 Rh1DG258500
rosa_wichuraiana	Rw1G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1133, 1241
AccBSI	CCGCTC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	804
AccII	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
AccIII	TCCGGA	1 cut(s)	1126
AclWI	GGATC	3 cut(s)	241, 596, 1205
AcoI	YGGCCR	2 cut(s)	84, 715
AcvI	CACGTG	1 cut(s)	1140
AcyI	GRCGYC	2 cut(s)	5, 65
AdeI	CACNNNGTG	2 cut(s)	45, 1140
AfaI	GTAC	5 cut(s)	71, 215, 1277, 1451, 1493
AfiI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1143, 1333
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	1 cut(s)	538
AhdI	GACNNNNNGTC	1 cut(s)	1342
AjnI	CCWGG	3 cut(s)	317, 904, 913
AleI	CACNNNNGTG	1 cut(s)	1247
AluBI	AGCT	6 cut(s)	27, 120, 295, 351, 603, 868
AluI	AGCT	6 cut(s)	27, 120, 295, 351, 603, 868
Alw21I	GWGCWC	2 cut(s)	456, 605
Alw26I	GTCTC	5 cut(s)	214, 229, 588, 994, 1003
AlwI	GGATC	3 cut(s)	241, 596, 1205
Aor13HI	TCCGGA	1 cut(s)	1126
AoxI	GGCC	5 cut(s)	84, 271, 715, 979, 1298
ApeKI	GCWGC	4 cut(s)	117, 159, 1079, 1330
Asp700I	GAANNNNTTC	1 cut(s)	560
AspA2I	CCTAGG	1 cut(s)	976
AspLEI	GCGC	4 cut(s)	308, 732, 801, 1425
AspS9I	GGNCC	2 cut(s)	682, 1270
AsuC2I	CCSGG	3 cut(s)	516, 1145, 1205
AsuHPI	GGTGA	3 cut(s)	484, 1081, 1415
AsuNHI	GCTAGC	1 cut(s)	295
AvaII	GGWCC	2 cut(s)	682, 1270
AvrII	CCTAGG	1 cut(s)	976
BanI	GGYRCC	2 cut(s)	1133, 1241
BanII	GRGCYC	1 cut(s)	605
BarI	GAAGNNNNNNTAC	2 cut(s)	1268, 1300
BauI	CACGAG	1 cut(s)	991
BbrPI	CACGTG	1 cut(s)	1140
BbsI	GAAGAC	1 cut(s)	488
Bbv12I	GWGCWC	2 cut(s)	456, 605
BbvI	GCAGC	4 cut(s)	129, 171, 1066, 1317
BccI	CCATC	7 cut(s)	86, 403, 758, 965, 1046, 1055, 1207
BceAI	ACGGC	8 cut(s)	78, 112, 293, 403, 408, 730, 1135, 1255
BcgI	CGANNNNNNTGC	6 cut(s)	448, 482, 931, 965, 1369, 1403
BciT130I	CCWGG	3 cut(s)	319, 906, 915
BcnI	CCSGG	3 cut(s)	516, 1145, 1205
BcoDI	GTCTC	5 cut(s)	214, 229, 588, 994, 1003
BfaI	CTAG	3 cut(s)	296, 977, 1437
BfmI	CTRYAG	1 cut(s)	1003
BfoI	RGCGCY	1 cut(s)	733
BlnI	CCTAGG	1 cut(s)	976
BmcAI	AGTACT	1 cut(s)	1451
Bme1390I	CCNGG	6 cut(s)	319, 516, 906, 915, 1145, 1205
Bme18I	GGWCC	2 cut(s)	682, 1270
BmeRI	GACNNNNNGTC	1 cut(s)	1342
BmgT120I	GGNCC	2 cut(s)	682, 1270
BmiI	GGNNCC	9 cut(s)	417, 648, 770, 1028, 1135, 1149, 1243, 1271, 1272
BmrFI	CCNGG	6 cut(s)	319, 516, 906, 915, 1145, 1205
BmrI	ACTGGG	2 cut(s)	665, 1437
BmsI	GCATC	2 cut(s)	249, 840
BmtI	GCTAGC	1 cut(s)	299
BmuI	ACTGGG	2 cut(s)	665, 1437
BpiI	GAAGAC	1 cut(s)	488
BplI	GAGNNNNNCTC	2 cut(s)	284, 316
BpuMI	CCSGG	3 cut(s)	516, 1145, 1205
BsaAI	YACGTR	2 cut(s)	1140, 1387
BsaBI	GATNNNNATC	1 cut(s)	251
BsaHI	GRCGYC	2 cut(s)	5, 65
BsaI	GGTCTC	1 cut(s)	588
BsaJI	CCNNGG	8 cut(s)	169, 235, 317, 515, 877, 904, 976, 1295
BsaWI	WCCGGW	2 cut(s)	597, 1126
BsaXI	ACNNNNNCTCC	6 cut(s)	435, 465, 587, 617, 1475, 1505
Bsc4I	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1143, 1333
Bse118I	RCCGGY	4 cut(s)	155, 269, 696, 1326
Bse1I	ACTGG	3 cut(s)	502, 671, 1432
Bse3DI	GCAATG	2 cut(s)	963, 969
Bse8I	GATNNNNATC	1 cut(s)	251
BseAI	TCCGGA	1 cut(s)	1126
BseBI	CCWGG	3 cut(s)	319, 906, 915
BseDI	CCNNGG	8 cut(s)	169, 235, 317, 515, 877, 904, 976, 1295
BseGI	GGATG	3 cut(s)	240, 340, 1038
BseJI	GATNNNNATC	1 cut(s)	251
BseLI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1143, 1333
BseMI	GCAATG	2 cut(s)	963, 969
BseMII	CTCAG	1 cut(s)	453
BseNI	ACTGG	3 cut(s)	502, 671, 1432
BseRI	GAGGAG	2 cut(s)	95, 155
BseX3I	CGGCCG	2 cut(s)	84, 715
BseXI	GCAGC	4 cut(s)	129, 171, 1066, 1317
BseYI	CCCAGC	3 cut(s)	1399, 1411, 1459
BsgI	GTGCAG	1 cut(s)	1409
Bsh1236I	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
Bsh1285I	CGRYCG	4 cut(s)	87, 718, 1066, 1327
BshFI	GGCC	5 cut(s)	86, 273, 717, 981, 1300
BshNI	GGYRCC	2 cut(s)	1133, 1241
BsiEI	CGRYCG	4 cut(s)	87, 718, 1066, 1327
BsiHKAI	GWGCWC	2 cut(s)	456, 605
BsiWI	CGTACG	1 cut(s)	69
BslFI	GGGAC	3 cut(s)	659, 1187, 1283
BslI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1143, 1333
BsmAI	GTCTC	5 cut(s)	214, 229, 588, 994, 1003
BsmBI	CGTCTC	2 cut(s)	214, 229
BsmFI	GGGAC	3 cut(s)	659, 1187, 1283
BsnI	GGCC	5 cut(s)	86, 273, 717, 981, 1300
Bso31I	GGTCTC	1 cut(s)	588
Bsp1286I	GDGCHC	2 cut(s)	456, 605
Bsp13I	TCCGGA	1 cut(s)	1126
Bsp1407I	TGTACA	1 cut(s)	1491
Bsp143I	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
BspANI	GGCC	5 cut(s)	86, 273, 717, 981, 1300
BspCNI	CTCAG	1 cut(s)	454
BspEI	TCCGGA	1 cut(s)	1126
BspFNI	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	9 cut(s)	417, 648, 770, 1028, 1135, 1149, 1243, 1271, 1272
BspOI	GCTAGC	1 cut(s)	299
BspPI	GGATC	3 cut(s)	241, 596, 1205
BspT107I	GGYRCC	2 cut(s)	1133, 1241
BspTNI	GGTCTC	1 cut(s)	588
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	963, 969
BsrFI	RCCGGY	4 cut(s)	155, 269, 696, 1326
BsrGI	TGTACA	1 cut(s)	1491
BsrI	ACTGG	3 cut(s)	502, 671, 1432
BssAI	RCCGGY	4 cut(s)	155, 269, 696, 1326
BssECI	CCNNGG	8 cut(s)	169, 235, 317, 515, 877, 904, 976, 1295
BssMI	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
BssNI	GRCGYC	2 cut(s)	5, 65
BssSI	CACGAG	1 cut(s)	991
BssT1I	CCWWGG	2 cut(s)	976, 1295
Bst2BI	CACGAG	1 cut(s)	991
Bst2UI	CCWGG	3 cut(s)	319, 906, 915
Bst4CI	ACNGT	3 cut(s)	1067, 1220, 1249
Bst6I	CTCTTC	2 cut(s)	198, 224
BstACI	GRCGYC	2 cut(s)	5, 65
BstAPI	GCANNNNNTGC	2 cut(s)	1140, 1396
BstAUI	TGTACA	1 cut(s)	1491
BstBAI	YACGTR	2 cut(s)	1140, 1387
BstC8I	GCNNGC	6 cut(s)	157, 271, 297, 543, 667, 1084
BstDEI	CTNAG	1 cut(s)	462
BstDSI	CCRYGG	2 cut(s)	169, 877
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstF5I	GGATG	3 cut(s)	240, 340, 1038
BstFNI	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
BstH2I	RGCGCY	1 cut(s)	733
BstHHI	GCGC	4 cut(s)	308, 732, 801, 1425
BstKTI	GATC	7 cut(s)	39, 91, 249, 468, 591, 610, 1200
BstMAI	GTCTC	5 cut(s)	214, 229, 588, 994, 1003
BstMBI	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
BstMCI	CGRYCG	4 cut(s)	87, 718, 1066, 1327
BstNI	CCWGG	3 cut(s)	319, 906, 915
BstNSI	RCATGY	2 cut(s)	1234, 1345
BstSCI	CCNGG	6 cut(s)	317, 514, 904, 913, 1143, 1203
BstSFI	CTRYAG	1 cut(s)	1003
BstUI	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
BstV1I	GCAGC	4 cut(s)	129, 171, 1066, 1317
BstV2I	GAAGAC	1 cut(s)	488
BstX2I	RGATCY	1 cut(s)	246
BstYI	RGATCY	1 cut(s)	246
BstZI	CGGCCG	2 cut(s)	84, 715
BsuRI	GGCC	5 cut(s)	86, 273, 717, 981, 1300
BtgI	CCRYGG	2 cut(s)	169, 877
BtgZI	GCGATG	3 cut(s)	64, 1033, 1226
BtsCI	GGATG	3 cut(s)	240, 340, 1038
BtsIMutI	CAGTG	3 cut(s)	459, 1174, 1425
Cac8I	GCNNGC	6 cut(s)	157, 271, 297, 543, 667, 1084
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	4 cut(s)	308, 732, 801, 1425
Cfr10I	RCCGGY	4 cut(s)	155, 269, 696, 1326
Cfr13I	GGNCC	2 cut(s)	682, 1270
Cfr42I	CCGCGG	2 cut(s)	172, 880
CpoI	CGGWCCG	1 cut(s)	682
CseI	GACGC	5 cut(s)	54, 412, 790, 997, 1085
Csp6I	GTAC	5 cut(s)	70, 214, 1276, 1450, 1492
CspCI	CAANNNNNGTGG	2 cut(s)	1356, 1391
CspI	CGGWCCG	1 cut(s)	682
CviAII	CATG	8 cut(s)	136, 619, 643, 853, 1231, 1288, 1342, 1489
CviQI	GTAC	5 cut(s)	70, 214, 1276, 1450, 1492
DdeI	CTNAG	1 cut(s)	462
DpnI	GATC	7 cut(s)	38, 90, 248, 467, 590, 609, 1199
DpnII	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
DraIII	CACNNNGTG	2 cut(s)	45, 1140
DriI	GACNNNNNGTC	1 cut(s)	1342
EaeI	YGGCCR	2 cut(s)	84, 715
EagI	CGGCCG	2 cut(s)	84, 715
Eam1104I	CTCTTC	2 cut(s)	198, 224
Eam1105I	GACNNNNNGTC	1 cut(s)	1342
EarI	CTCTTC	2 cut(s)	198, 224
EciI	GGCGGA	4 cut(s)	37, 347, 359, 456
Ecl136II	GAGCTC	1 cut(s)	603
EclXI	CGGCCG	2 cut(s)	84, 715
Eco130I	CCWWGG	2 cut(s)	976, 1295
Eco24I	GRGCYC	1 cut(s)	605
Eco31I	GGTCTC	1 cut(s)	588
Eco47I	GGWCC	2 cut(s)	682, 1270
Eco52I	CGGCCG	2 cut(s)	84, 715
Eco53kI	GAGCTC	1 cut(s)	603
Eco72I	CACGTG	1 cut(s)	1140
EcoICRI	GAGCTC	1 cut(s)	603
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoO109I	RGGNCCY	1 cut(s)	1270
EcoRII	CCWGG	3 cut(s)	317, 904, 913
EcoT14I	CCWWGG	2 cut(s)	976, 1295
EcoT38I	GRGCYC	1 cut(s)	605
ErhI	CCWWGG	2 cut(s)	976, 1295
Esp3I	CGTCTC	2 cut(s)	214, 229
FaeI	CATG	8 cut(s)	139, 622, 646, 856, 1234, 1291, 1345, 1492
FaiI	YATR	9 cut(s)	137, 620, 644, 797, 854, 1232, 1289, 1343, 1490
FalI	AAGNNNNNCTT	2 cut(s)	1288, 1320
FaqI	GGGAC	3 cut(s)	659, 1187, 1283
FatI	CATG	8 cut(s)	135, 618, 642, 852, 1230, 1287, 1341, 1488
FauI	CCCGC	3 cut(s)	122, 1067, 1348
FblI	GTMKAC	1 cut(s)	804
FokI	GGATG	3 cut(s)	227, 347, 1025
FriOI	GRGCYC	1 cut(s)	605
FspBI	CTAG	3 cut(s)	296, 977, 1437
GlaI	GCGC	4 cut(s)	307, 731, 800, 1424
GsaI	CCCAGC	3 cut(s)	1403, 1415, 1463
HaeII	RGCGCY	1 cut(s)	733
HaeIII	GGCC	5 cut(s)	86, 273, 717, 981, 1300
HgaI	GACGC	5 cut(s)	54, 412, 790, 997, 1085
HhaI	GCGC	4 cut(s)	308, 732, 801, 1425
Hin1I	GRCGYC	2 cut(s)	5, 65
Hin1II	CATG	8 cut(s)	139, 622, 646, 856, 1234, 1291, 1345, 1492
Hin6I	GCGC	4 cut(s)	306, 730, 799, 1423
HinP1I	GCGC	4 cut(s)	306, 730, 799, 1423
HincII	GTYRAC	1 cut(s)	1434
HindII	GTYRAC	1 cut(s)	1434
HinfI	GANTC	5 cut(s)	74, 397, 475, 861, 1484
HpaI	GTTAAC	1 cut(s)	1434
HphI	GGTGA	3 cut(s)	484, 1081, 1415
Hpy166II	GTNNAC	2 cut(s)	805, 1434
Hpy188I	TCNGA	8 cut(s)	229, 402, 480, 566, 593, 607, 682, 860
Hpy188III	TCNNGA	7 cut(s)	92, 244, 424, 611, 1127, 1288, 1322
Hpy8I	GTNNAC	2 cut(s)	805, 1434
HpyCH4III	ACNGT	3 cut(s)	1067, 1220, 1249
HpyCH4IV	ACGT	4 cut(s)	927, 1139, 1316, 1386
HpyCH4V	TGCA	6 cut(s)	372, 630, 792, 933, 1350, 1390
HpyF3I	CTNAG	1 cut(s)	462
HpySE526I	ACGT	4 cut(s)	927, 1139, 1316, 1386
Hsp92I	GRCGYC	2 cut(s)	5, 65
Hsp92II	CATG	8 cut(s)	139, 622, 646, 856, 1234, 1291, 1345, 1492
HspAI	GCGC	4 cut(s)	306, 730, 799, 1423
KflI	GGGWCCC	1 cut(s)	1270
Kpn2I	TCCGGA	1 cut(s)	1126
KroI	GCCGGC	2 cut(s)	155, 269
KroNI	GCCGGC	2 cut(s)	157, 271
KspAI	GTTAAC	1 cut(s)	1434
KspI	CCGCGG	2 cut(s)	172, 880
Kzo9I	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
LmnI	GCTCC	7 cut(s)	24, 125, 415, 600, 608, 774, 1147
Lsp1109I	GCAGC	4 cut(s)	129, 171, 1066, 1317
LweI	GCATC	2 cut(s)	249, 840
MaeI	CTAG	3 cut(s)	296, 977, 1437
MaeII	ACGT	4 cut(s)	927, 1139, 1316, 1386
MaeIII	GTNAC	1 cut(s)	388
MalI	GATC	7 cut(s)	38, 90, 248, 467, 590, 609, 1199
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
MflI	RGATCY	1 cut(s)	246
MhlI	GDGCHC	2 cut(s)	456, 605
MlyI	GAGTC	2 cut(s)	83, 1493
MmeI	TCCRAC	2 cut(s)	425, 660
MroI	TCCGGA	1 cut(s)	1126
MroNI	GCCGGC	2 cut(s)	155, 269
MroXI	GAANNNNTTC	1 cut(s)	560
MseI	TTAA	3 cut(s)	276, 1260, 1433
MslI	CAYNNNNRTG	1 cut(s)	1247
MspA1I	CMGCKG	2 cut(s)	171, 879
MspR9I	CCNGG	6 cut(s)	319, 516, 906, 915, 1145, 1205
MvaI	CCWGG	3 cut(s)	319, 906, 915
MvnI	CGCG	9 cut(s)	43, 83, 171, 285, 306, 329, 801, 879, 1062
NaeI	GCCGGC	2 cut(s)	157, 271
NciI	CCSGG	3 cut(s)	516, 1145, 1205
NdeII	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
NgoMIV	GCCGGC	2 cut(s)	155, 269
NheI	GCTAGC	1 cut(s)	295
NlaIII	CATG	8 cut(s)	139, 622, 646, 856, 1234, 1291, 1345, 1492
NlaIV	GGNNCC	9 cut(s)	417, 648, 770, 1028, 1135, 1149, 1243, 1271, 1272
NmeAIII	GCCGAG	3 cut(s)	216, 417, 435
NmuCI	GTSAC	1 cut(s)	388
NspI	RCATGY	2 cut(s)	1234, 1345
OliI	CACNNNNGTG	1 cut(s)	1247
PagI	TCATGA	1 cut(s)	1287
PciI	ACATGT	1 cut(s)	1341
PcsI	WCGNNNNNNNCGW	6 cut(s)	147, 360, 398, 491, 720, 1245
PdiI	GCCGGC	2 cut(s)	157, 271
PdmI	GAANNNNTTC	1 cut(s)	560
PfeI	GAWTC	3 cut(s)	397, 475, 861
Pfl23II	CGTACG	1 cut(s)	69
PflFI	GACNNNGTC	1 cut(s)	1115
PleI	GAGTC	2 cut(s)	82, 1492
PmaCI	CACGTG	1 cut(s)	1140
PmlI	CACGTG	1 cut(s)	1140
PpsI	GAGTC	2 cut(s)	82, 1492
Ppu21I	YACGTR	2 cut(s)	1140, 1387
PpuMI	RGGWCCY	1 cut(s)	1270
PscI	ACATGT	1 cut(s)	1341
Psp124BI	GAGCTC	1 cut(s)	605
Psp5II	RGGWCCY	1 cut(s)	1270
Psp6I	CCWGG	3 cut(s)	317, 904, 913
PspCI	CACGTG	1 cut(s)	1140
PspFI	CCCAGC	3 cut(s)	1399, 1411, 1459
PspGI	CCWGG	3 cut(s)	317, 904, 913
PspLI	CGTACG	1 cut(s)	69
PspN4I	GGNNCC	9 cut(s)	417, 648, 770, 1028, 1135, 1149, 1243, 1271, 1272
PspPI	GGNCC	2 cut(s)	682, 1270
PspPPI	RGGWCCY	1 cut(s)	1270
PsuI	RGATCY	1 cut(s)	246
PsyI	GACNNNGTC	1 cut(s)	1115
RsaI	GTAC	5 cut(s)	71, 215, 1277, 1451, 1493
RsaNI	GTAC	5 cut(s)	70, 214, 1276, 1450, 1492
RseI	CAYNNNNRTG	1 cut(s)	1247
Rsr2I	CGGWCCG	1 cut(s)	682
RsrII	CGGWCCG	1 cut(s)	682
SacI	GAGCTC	1 cut(s)	605
SacII	CCGCGG	2 cut(s)	172, 880
SaqAI	TTAA	3 cut(s)	276, 1260, 1433
Sau3AI	GATC	7 cut(s)	36, 88, 246, 465, 588, 607, 1197
Sau96I	GGNCC	2 cut(s)	682, 1270
ScaI	AGTACT	1 cut(s)	1451
SchI	GAGTC	2 cut(s)	83, 1493
ScrFI	CCNGG	6 cut(s)	319, 516, 906, 915, 1145, 1205
SduI	GDGCHC	2 cut(s)	456, 605
SfaNI	GCATC	2 cut(s)	249, 840
SfcI	CTRYAG	1 cut(s)	1003
Sfr303I	CCGCGG	2 cut(s)	172, 880
SgrBI	CCGCGG	2 cut(s)	172, 880
SinI	GGWCC	2 cut(s)	682, 1270
SmiMI	CAYNNNNRTG	1 cut(s)	1247
SspMI	CTAG	3 cut(s)	296, 977, 1437
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	6 cut(s)	317, 514, 904, 913, 1143, 1203
StyI	CCWWGG	2 cut(s)	976, 1295
TaaI	ACNGT	3 cut(s)	1067, 1220, 1249
TaiI	ACGT	4 cut(s)	930, 1142, 1319, 1389
TatI	WGTACW	2 cut(s)	1449, 1491
TauI	GCSGC	8 cut(s)	86, 174, 332, 548, 720, 882, 984, 1017
TfiI	GAWTC	3 cut(s)	397, 475, 861
Tru1I	TTAA	3 cut(s)	276, 1260, 1433
Tru9I	TTAA	3 cut(s)	276, 1260, 1433
TscAI	CASTG	3 cut(s)	466, 1174, 1432
TseFI	GTSAC	1 cut(s)	388
TseI	GCWGC	4 cut(s)	117, 159, 1079, 1330
Tsp45I	GTSAC	1 cut(s)	388
TspDTI	ATGAA	6 cut(s)	124, 247, 585, 607, 1276, 1304
TspGWI	ACGGA	1 cut(s)	1488
TspRI	CASTG	3 cut(s)	466, 1174, 1432
Tth111I	GACNNNGTC	1 cut(s)	1115
VpaK11BI	GGWCC	2 cut(s)	682, 1270
XagI	CCTNNNNNAGG	1 cut(s)	903
XceI	RCATGY	2 cut(s)	1234, 1345
XmaJI	CCTAGG	1 cut(s)	976
XmiI	GTMKAC	1 cut(s)	804
XmnI	GAANNNNTTC	1 cut(s)	560
XspI	CTAG	3 cut(s)	296, 977, 1437
ZrmI	AGTACT	1 cut(s)	1451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.