RchiOBHm_Chr2g0091511

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
5175803 .. 5177093
1291 bp
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UTR
Exon/CDS
Intron
PRQ46668

Sequence Viewer

Length: 381 bp
ATGGTCCGTATCGGAGGTGGTGTATTTCCTCATATCAAGGAACCTGATTACTTAAGAGATGGTCAGTATCGGATTGACAATCAGGCCACCCCCACCATGCTAAATTGTCTCATGTACAAGCTCTCTTATTACAGGTTTGTGGACACGGATGGTAAAGGCTTTGATAGGGTGAGGCGAACAGAAATTGGAAAGAAGCATTTCAAACTTACCCATTTGAAGAGCGAGCCCACAGTATTTACAACTCACCATTGGATGGTTCGGATATACAAACTAAAACCGCCAAAGAATCGTATCCGAGGAAAGACTAAAAAATCAAAATCGAAATCAACCTCAACGATTAGCGGAAAAAGAAGTGGGACTAAAAAGAATCCGTGGAACTGA

Protein Analysis

126

Amino Acids

14.76

Weight (kDa)

10.45

Isoelectric Point (pI)

26.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 253
AciI CCGC 2 cut(s) 278, 342
AfaI GTAC 1 cut(s) 116
AfiI CCNNNNNNNGG 1 cut(s) 253
AflII CTTAAG 1 cut(s) 52
AgsI TTSAA 2 cut(s) 202, 217
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 113
AoxI GGCC 1 cut(s) 84
Asp700I GAANNNNTTC 1 cut(s) 197
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 181, 236
AvaII GGWCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 228
BccI CCATC 3 cut(s) 53, 143, 247
BciVI GTATCC 1 cut(s) 302
BcoDI GTCTC 1 cut(s) 113
BfrI CTTAAG 1 cut(s) 52
BfuI GTATCC 1 cut(s) 302
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 42
BsaJI CCNNGG 2 cut(s) 295, 371
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 1 cut(s) 253
BseDI CCNNGG 2 cut(s) 295, 371
BseGI GGATG 2 cut(s) 154, 258
BseLI CCNNNNNNNGG 1 cut(s) 253
BshFI GGCC 1 cut(s) 86
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 1 cut(s) 253
BsmAI GTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 370
BsnI GGCC 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 228
Bsp1407I TGTACA 1 cut(s) 114
BspACI CCGC 2 cut(s) 278, 342
BspANI GGCC 1 cut(s) 86
BspLI GGNNCC 1 cut(s) 42
BspQI GCTCTTC 1 cut(s) 212
BspTI CTTAAG 1 cut(s) 52
BsrGI TGTACA 1 cut(s) 114
BssECI CCNNGG 2 cut(s) 295, 371
Bst4CI ACNGT 1 cut(s) 232
Bst6I CTCTTC 1 cut(s) 212
BstAFI CTTAAG 1 cut(s) 52
BstAUI TGTACA 1 cut(s) 114
BstC8I GCNNGC 1 cut(s) 224
BstDSI CCRYGG 1 cut(s) 371
BstF5I GGATG 2 cut(s) 154, 258
BstMAI GTCTC 1 cut(s) 113
BsuI GTATCC 1 cut(s) 302
BsuRI GGCC 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 371
BtsCI GGATG 2 cut(s) 154, 258
Cac8I GCNNGC 1 cut(s) 224
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 115
CviAII CATG 2 cut(s) 97, 112
CviJI RGCY 4 cut(s) 86, 121, 159, 226
CviKI_1 RGCY 4 cut(s) 86, 121, 159, 226
CviQI GTAC 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 212
EarI CTCTTC 1 cut(s) 212
Eco24I GRGCYC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 4
EcoT38I GRGCYC 1 cut(s) 228
FaeI CATG 2 cut(s) 100, 115
FaiI YATR 4 cut(s) 33, 98, 113, 265
FaqI GGGAC 1 cut(s) 370
FatI CATG 2 cut(s) 96, 111
FokI GGATG 2 cut(s) 161, 265
FriOI GRGCYC 1 cut(s) 228
HaeIII GGCC 1 cut(s) 86
Hin1II CATG 2 cut(s) 100, 115
HinfI GANTC 2 cut(s) 286, 367
HphI GGTGA 2 cut(s) 181, 236
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 4 cut(s) 14, 72, 261, 296
Hpy8I GTNNAC 1 cut(s) 142
HpyCH4III ACNGT 1 cut(s) 232
Hsp92II CATG 2 cut(s) 100, 115
LguI GCTCTTC 1 cut(s) 212
LpnPI CCDG 3 cut(s) 57, 68, 118
MboII GAAGA 1 cut(s) 229
MhlI GDGCHC 1 cut(s) 228
MluCI AATT 2 cut(s) 103, 183
MnlI CCTC 5 cut(s) 8, 39, 165, 290, 340
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 1 cut(s) 53
MspCI CTTAAG 1 cut(s) 52
NlaIII CATG 2 cut(s) 100, 115
NlaIV GGNNCC 1 cut(s) 42
PciSI GCTCTTC 1 cut(s) 212
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 2 cut(s) 286, 367
PflMI CCANNNNNTGG 1 cut(s) 253
PspN4I GGNNCC 1 cut(s) 42
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
SapI GCTCTTC 1 cut(s) 212
SaqAI TTAA 1 cut(s) 53
Sau96I GGNCC 1 cut(s) 4
SduI GDGCHC 1 cut(s) 228
SetI ASST 5 cut(s) 19, 46, 123, 137, 332
SinI GGWCC 1 cut(s) 4
SmlI CTYRAG 1 cut(s) 52
SmoI CTYRAG 1 cut(s) 52
Sse9I AATT 2 cut(s) 103, 183
SsiI CCGC 2 cut(s) 278, 342
TaaI ACNGT 1 cut(s) 232
TaqI TCGA 1 cut(s) 320
TasI AATT 2 cut(s) 103, 183
TatI WGTACW 1 cut(s) 114
TfiI GAWTC 2 cut(s) 286, 367
Tru1I TTAA 1 cut(s) 53
Tru9I TTAA 1 cut(s) 53
TspGWI ACGGA 2 cut(s) 161, 360
Van91I CCANNNNNTGG 1 cut(s) 253
Vha464I CTTAAG 1 cut(s) 52
VpaK11BI GGWCC 1 cut(s) 4
XmnI GAANNNNTTC 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.