Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002407.1

Orthogroup ID

OG0009118

Physical Location & Seq

Genomic Coordinates Forward (+)

23954 .. 30888

Gene Structure 6935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002407.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

atggagggctccgagacctccaacggtacaaccttgaggaatgctttcggtaatgtcctctccttcttcatcctcatcctgatcggcgttctcgctttttcgatccgtctcttctctgtcataaagtacgagagtgttattcacgagtttgatccttatttcaattacagagtcactcagtttctgacaaagaatggaatatatgatttttggaactggtttgatgatcgaacctggtatcctcttggtcgtgtgattggtggaactgtttaccctggattgaccttgacagcaggaaccctatggtggttgttgaattcattaaatattcctctttctgtggaaactatttgtgtatttactgctcctatattctctgctttcacatcctgggcagcttaccttctgactcgggaagttaagggtgctggtgctggactaacagctgcagctcttattgcaatggtcccatcatatatttctcggtctgtagctggaagctatgacaatgaagctgtggctatttttgctttggtcttcaccttctatctctatataaagacactgaatacaggatccctcttttatgcaactcttaatgccctggcatacttttacatggtttgctcttggggaggctacacatttattatcaatcttattccaatgcatgtgcttatgtgcattgtgactggtcgatactcatcacgactgtacattgcctatgctcctcttgttgtcttgggcacattattagctgctttggtgcctgttgttggatttaatgcagtcatgacatcggaacattttgcatccttcttggtttttattattatacacgtggtcgcatttgtgcactatatcaaaggggttctttctcctaaaatgttcaaagttgctgtgacacttgttctatctattggcgtgatagtatgctgtgctgtgatagcagtactggtagctttggtagcttcaagcccgacgaaggggtggagtgggcgaagtctaagtctacttgatccaacctatgcaagcaagtacataccaattattgctagcgttagtgagcatcaacctcctacttggccctcatactttatggacattaatgtgttggcattcttagttccagctggcataattgcatgcttttcacccttatcggatgcgagctcttttgtcatcctttatattgtaacatcagtttatttctctggagttatggtgcgtcttatgttggtacttgctccagcagcatgcattacctctggaattgctctttctgaagcttttgaagtttttacacgatcaattaagtttcagttacctggtttacaaggaatttcaccagttaaggcagaggagaccagttctgatagcactgtgccactgaatgaagtgcctaagaccgataaaagtggagagacattaaaggagagaccctcaagaaagaacaggaagaaggaaaaagaacctgtagaaaagccttctatcaaagctcgaattgaaaagaagcttctggttttacctcttgagggatcagttcttgctatttttctacttgtgctgctgggtgccttctatgtggttcattgtgtctgggcagcagcagaagcgtattcagccccatccattgttctaacatctcattcacatgatggtctccatgtttttgatgattttagagaggcttatgcatggctaagccacaatactgaggtggatgataaagttgcatcttggtgggattatgggtaccaaaccactgccatggctaaccgcactgtcattgttgacaataatacctggaacaacactcatattgcaacagtcggtactgccatgtcttctccagaaaaggccgcttgggaaattttcaactcattggatgtaaaatatgtcctcgttgtatttggaggtcttgttggctaccccagtgatgatattaataaattcctgtggatggtccgtatcggaggtggtgtatttcctcatatcaaggaacccgattacttaagagatggtcagtatcggattgacaatcaggccacccccaccatgctaaattgtctcatgtacaagctctcttattacaggtttgtggacacggatggtaaaggctttgacagggtgaggcgaacagaaattggaaagaagtatttcaaacttacccattttgaagaggtatttacaactcaccattggatggttcggatatacaaactaaaaccgccaaagaaccgtatccgaggaaagactaaaaaatcaaaatcgaaatcaacctcaacgattagcggaaaaagaagtgggactaaaaagaatccgtggaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004576 GO:0004579 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009628 GO:0009651 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043687 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0047484 GO:0048583 GO:0050789 GO:0050896 GO:0065007 GO:0070085 GO:0071704 GO:0071944 GO:0080134 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

STT3

Protein Analysis

777

Amino Acids

86.58

Weight (kDa)

9.14

Isoelectric Point (pI)

33.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19690 AT5G19690
fragaria_vesca	FvH4_1g05850 FvH4_1g05850
malus_domestica	MD02G1060500.v1.1 MD15G1194000.v1.1
prunus_persica	Prupe.7G222300_v2.0.a1 Prupe.7G222300_v2.0.a1
pyrus_communis	pycom02g04970 pycom15g17380
rosa_chinensis	RchiOBHm_Chr2g0091511 RchiOBHm_Chr2g0091521 RchiOBHm_Chr2g0091601
rosa_laevigata	RLG00000016232
rosa_multiflora	Rmu_sc0002407.1_g000006
rosa_roxburghii	Rroxscaffold_2G00149970
rosa_rugosa	Rorug02G0018400
rosa_samantha	Rh2AG063600 Rh2BG063000 Rh2CG064700 Rh2DG063100
rosa_wichuraiana	Rw2G005680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1755
AccB1I	GGYRCC	3 cut(s)	766, 1574, 1755
AccB7I	CCANNNNNTGG	1 cut(s)	2206
AccI	GTMKAC	1 cut(s)	1012
AciI	CCGC	4 cut(s)	1780, 1863, 2231, 2295
AclWI	GGATC	6 cut(s)	97, 146, 570, 583, 1013, 1546
AcsI	RAATTY	4 cut(s)	316, 1341, 1872, 1952
AcuI	CTGAAG	1 cut(s)	1305
AcvI	CACGTG	1 cut(s)	841
AfaI	GTAC	9 cut(s)	28, 128, 716, 954, 1040, 1242, 1757, 1837, 2078
AfiI	CCNNNNNNNGG	7 cut(s)	306, 776, 985, 986, 1535, 1963, 2206
AflII	CTTAAG	1 cut(s)	2014
AflIII	ACRYGT	1 cut(s)	838
AgsI	TTSAA	9 cut(s)	163, 316, 892, 975, 1295, 1508, 1879, 2164, 2180
AjnI	CCWGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
AloI	GAACNNNNNNTCC	2 cut(s)	223, 255
Alw21I	GWGCWC	2 cut(s)	858, 1175
Alw26I	GTCTC	7 cut(s)	8, 113, 1358, 1418, 1432, 1667, 2075
Alw44I	GTGCAC	1 cut(s)	854
AlwI	GGATC	6 cut(s)	97, 146, 570, 583, 1013, 1546
AlwNI	CAGNNNCTG	1 cut(s)	184
Ama87I	CYCGRG	1 cut(s)	411
AoxI	GGCC	3 cut(s)	1085, 1860, 2046
ApaLI	GTGCAC	1 cut(s)	854
ApeKI	GCWGC	8 cut(s)	395, 446, 449, 758, 1253, 1567, 1604, 1607
ApoI	RAATTY	4 cut(s)	316, 1341, 1872, 1952
ArsI	GACNNNNNNTTYG	2 cut(s)	994, 1026
AseI	ATTAAT	2 cut(s)	1107, 1947
Asp700I	GAANNNNTTC	2 cut(s)	44, 2159
Asp718I	GGTACC	1 cut(s)	1755
AspS9I	GGNCC	3 cut(s)	466, 1086, 1966
AsuHPI	GGTGA	5 cut(s)	532, 1146, 1338, 2143, 2189
AsuNHI	GCTAGC	1 cut(s)	1055
AvaI	CYCGRG	1 cut(s)	411
AvaII	GGWCC	2 cut(s)	466, 1966
BaeGI	GKGCMC	2 cut(s)	749, 858
BamHI	GGATCC	1 cut(s)	575
BanI	GGYRCC	3 cut(s)	766, 1574, 1755
BanII	GRGCYC	2 cut(s)	11, 1175
BauI	CACGAG	1 cut(s)	143
BbrPI	CACGTG	1 cut(s)	841
BbsI	GAAGAC	2 cut(s)	529, 1839
Bbv12I	GWGCWC	2 cut(s)	858, 1175
BbvI	GCAGC	8 cut(s)	407, 433, 461, 745, 1265, 1554, 1616, 1619
BccI	CCATC	7 cut(s)	478, 1636, 1652, 1957, 2015, 2105, 2200
BciT130I	CCWGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
BciVI	GTATCC	2 cut(s)	249, 2255
BcoDI	GTCTC	7 cut(s)	8, 113, 1358, 1418, 1432, 1667, 2075
BfaI	CTAG	1 cut(s)	1056
BfmI	CTRYAG	3 cut(s)	447, 489, 1476
BfrI	CTTAAG	1 cut(s)	2014
BfuI	GTATCC	2 cut(s)	249, 2255
BisI	GCNGC	9 cut(s)	396, 447, 450, 759, 1254, 1568, 1605, 1608, 1863
BlpI	GCTNAGC	1 cut(s)	1703
BlsI	GCNGC	9 cut(s)	397, 448, 451, 760, 1255, 1569, 1606, 1609, 1864
BmcAI	AGTACT	1 cut(s)	954
Bme1390I	CCNGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
Bme18I	GGWCC	2 cut(s)	466, 1966
BmeT110I	CYCGRG	1 cut(s)	411
BmgT120I	GGNCC	3 cut(s)	466, 1086, 1966
BmiI	GGNNCC	8 cut(s)	10, 298, 468, 577, 768, 1576, 1757, 2004
BmrFI	CCNGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
BmrI	ACTGGG	1 cut(s)	1929
BmsI	GCATC	4 cut(s)	821, 1078, 1156, 1745
BmtI	GCTAGC	1 cut(s)	1059
BmuI	ACTGGG	1 cut(s)	1929
BpiI	GAAGAC	2 cut(s)	529, 1839
BplI	GAGNNNNNCTC	2 cut(s)	1427, 1459
BpmI	CTGGAG	3 cut(s)	1233, 1236, 1836
Bpu1102I	GCTNAGC	1 cut(s)	1703
BpuEI	CTTGAG	3 cut(s)	55, 1429, 1553
BsaAI	YACGTR	1 cut(s)	841
BsaBI	GATNNNNATC	1 cut(s)	703
BsaI	GGTCTC	4 cut(s)	8, 1358, 1432, 1667
BsaJI	CCNNGG	6 cut(s)	274, 390, 603, 1770, 2248, 2324
BsaXI	ACNNNNNCTCC	6 cut(s)	1209, 1239, 1908, 1938, 1968, 1998
Bsc4I	CCNNNNNNNGG	7 cut(s)	306, 776, 985, 986, 1535, 1963, 2206
Bse1I	ACTGG	6 cut(s)	221, 697, 960, 1349, 1368, 1935
Bse3DI	GCAATG	2 cut(s)	468, 717
Bse8I	GATNNNNATC	1 cut(s)	703
BseBI	CCWGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
BseDI	CCNNGG	6 cut(s)	274, 390, 603, 1770, 2248, 2324
BseJI	GATNNNNATC	1 cut(s)	703
BseLI	CCNNNNNNNGG	7 cut(s)	306, 776, 985, 986, 1535, 1963, 2206
BseMI	GCAATG	2 cut(s)	468, 717
BseMII	CTCAG	2 cut(s)	191, 1707
BseNI	ACTGG	6 cut(s)	221, 697, 960, 1349, 1368, 1935
BseRI	GAGGAG	2 cut(s)	720, 1376
BseSI	GKGCMC	2 cut(s)	749, 858
BseXI	GCAGC	8 cut(s)	407, 433, 461, 745, 1265, 1554, 1616, 1619
BseYI	CCCAGC	1 cut(s)	1570
BshFI	GGCC	3 cut(s)	1087, 1862, 2048
BshNI	GGYRCC	3 cut(s)	766, 1574, 1755
BsiHKAI	GWGCWC	2 cut(s)	858, 1175
BsiHKCI	CYCGRG	1 cut(s)	411
BslFI	GGGAC	2 cut(s)	452, 2323
BslI	CCNNNNNNNGG	7 cut(s)	306, 776, 985, 986, 1535, 1963, 2206
BsmAI	GTCTC	7 cut(s)	8, 113, 1358, 1418, 1432, 1667, 2075
BsmBI	CGTCTC	1 cut(s)	113
BsmFI	GGGAC	2 cut(s)	452, 2323
BsmI	GAATGC	2 cut(s)	46, 1118
BsnI	GGCC	3 cut(s)	1087, 1862, 2048
Bso31I	GGTCTC	4 cut(s)	8, 1358, 1432, 1667
BsoBI	CYCGRG	1 cut(s)	411
Bsp1286I	GDGCHC	4 cut(s)	11, 749, 858, 1175
Bsp1407I	TGTACA	2 cut(s)	714, 2076
Bsp143I	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
Bsp1720I	GCTNAGC	1 cut(s)	1703
Bsp19I	CCATGG	1 cut(s)	1770
BspACI	CCGC	4 cut(s)	1780, 1863, 2231, 2295
BspANI	GGCC	3 cut(s)	1087, 1862, 2048
BspCNI	CTCAG	2 cut(s)	190, 1708
BspHI	TCATGA	1 cut(s)	792
BspLI	GGNNCC	8 cut(s)	10, 298, 468, 577, 768, 1576, 1757, 2004
BspMAI	CTGCAG	1 cut(s)	451
BspOI	GCTAGC	1 cut(s)	1059
BspPI	GGATC	6 cut(s)	97, 146, 570, 583, 1013, 1546
BspT107I	GGYRCC	3 cut(s)	766, 1574, 1755
BspTI	CTTAAG	1 cut(s)	2014
BspTNI	GGTCTC	4 cut(s)	8, 1358, 1432, 1667
BsrDI	GCAATG	2 cut(s)	468, 717
BsrGI	TGTACA	2 cut(s)	714, 2076
BsrI	ACTGG	6 cut(s)	221, 697, 960, 1349, 1368, 1935
BssECI	CCNNGG	6 cut(s)	274, 390, 603, 1770, 2248, 2324
BssMI	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
BssSI	CACGAG	1 cut(s)	143
BssT1I	CCWWGG	1 cut(s)	1770
Bst2BI	CACGAG	1 cut(s)	143
Bst2UI	CCWGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
Bst4CI	ACNGT	7 cut(s)	26, 268, 714, 1384, 1786, 1831, 2243
Bst6I	CTCTTC	2 cut(s)	116, 2175
BstAFI	CTTAAG	1 cut(s)	2014
BstAUI	TGTACA	2 cut(s)	714, 2076
BstBAI	YACGTR	1 cut(s)	841
BstC8I	GCNNGC	6 cut(s)	1033, 1057, 1135, 1147, 1171, 1258
BstDEI	CTNAG	6 cut(s)	177, 1007, 1123, 1404, 1703, 1716
BstDSI	CCRYGG	2 cut(s)	1770, 2324
BstKTI	GATC	8 cut(s)	84, 105, 154, 229, 578, 1021, 1310, 1541
BstMAI	GTCTC	7 cut(s)	8, 113, 1358, 1418, 1432, 1667, 2075
BstMBI	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
BstMWI	GCNNNNNNNGC	7 cut(s)	458, 527, 947, 968, 1253, 1613, 1622
BstNI	CCWGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
BstNSI	RCATGY	3 cut(s)	674, 1149, 1260
BstSCI	CCNGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
BstSFI	CTRYAG	3 cut(s)	447, 489, 1476
BstSLI	GKGCMC	2 cut(s)	749, 858
BstV1I	GCAGC	8 cut(s)	407, 433, 461, 745, 1265, 1554, 1616, 1619
BstV2I	GAAGAC	2 cut(s)	529, 1839
BstX2I	RGATCY	1 cut(s)	575
BstXI	CCANNNNNNTGG	1 cut(s)	1771
BstYI	RGATCY	1 cut(s)	575
BsuI	GTATCC	2 cut(s)	249, 2255
BsuRI	GGCC	3 cut(s)	1087, 1862, 2048
BtgI	CCRYGG	2 cut(s)	1770, 2324
BtsI	GCAGTG	1 cut(s)	1764
BtsIMutI	CAGTG	6 cut(s)	563, 1380, 1388, 1764, 1782, 1942
Cac8I	GCNNGC	6 cut(s)	1033, 1057, 1135, 1147, 1171, 1258
CaiI	CAGNNNCTG	1 cut(s)	184
CciI	TCATGA	1 cut(s)	792
Cfr13I	GGNCC	3 cut(s)	466, 1086, 1966
CseI	GACGC	1 cut(s)	1217
CsiI	ACCWGGT	2 cut(s)	233, 1327
Csp6I	GTAC	9 cut(s)	27, 127, 715, 953, 1039, 1241, 1756, 1836, 2077
CviQI	GTAC	9 cut(s)	27, 127, 715, 953, 1039, 1241, 1756, 1836, 2077
DdeI	CTNAG	6 cut(s)	177, 1007, 1123, 1404, 1703, 1716
DpnI	GATC	8 cut(s)	83, 104, 153, 228, 577, 1020, 1309, 1540
DpnII	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
Eam1104I	CTCTTC	2 cut(s)	116, 2175
EarI	CTCTTC	2 cut(s)	116, 2175
Ecl136II	GAGCTC	1 cut(s)	1173
Eco130I	CCWWGG	1 cut(s)	1770
Eco24I	GRGCYC	2 cut(s)	11, 1175
Eco31I	GGTCTC	4 cut(s)	8, 1358, 1432, 1667
Eco47I	GGWCC	2 cut(s)	466, 1966
Eco53kI	GAGCTC	1 cut(s)	1173
Eco57I	CTGAAG	1 cut(s)	1305
Eco72I	CACGTG	1 cut(s)	841
Eco88I	CYCGRG	1 cut(s)	411
EcoICRI	GAGCTC	1 cut(s)	1173
EcoRI	GAATTC	1 cut(s)	316
EcoRII	CCWGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
EcoT14I	CCWWGG	1 cut(s)	1770
EcoT22I	ATGCAT	3 cut(s)	672, 1262, 1699
EcoT38I	GRGCYC	2 cut(s)	11, 1175
ErhI	CCWWGG	1 cut(s)	1770
Esp3I	CGTCTC	1 cut(s)	113
FalI	AAGNNNNNCTT	2 cut(s)	858, 890
FaqI	GGGAC	2 cut(s)	452, 2323
FblI	GTMKAC	1 cut(s)	1012
Fnu4HI	GCNGC	9 cut(s)	396, 447, 450, 759, 1254, 1568, 1605, 1608, 1863
FriOI	GRGCYC	2 cut(s)	11, 1175
Fsp4HI	GCNGC	9 cut(s)	396, 447, 450, 759, 1254, 1568, 1605, 1608, 1863
FspBI	CTAG	1 cut(s)	1056
GluI	GCNGC	9 cut(s)	396, 447, 450, 759, 1254, 1568, 1605, 1608, 1863
GsaI	CCCAGC	1 cut(s)	1574
GsuI	CTGGAG	3 cut(s)	1233, 1236, 1836
HaeIII	GGCC	3 cut(s)	1087, 1862, 2048
HgaI	GACGC	1 cut(s)	1217
HincII	GTYRAC	1 cut(s)	1795
HindII	GTYRAC	1 cut(s)	1795
HindIII	AAGCTT	2 cut(s)	1287, 1514
HinfI	GANTC	3 cut(s)	171, 409, 2320
HphI	GGTGA	5 cut(s)	532, 1146, 1338, 2143, 2189
Hpy166II	GTNNAC	6 cut(s)	271, 856, 1013, 1334, 1795, 2104
Hpy8I	GTNNAC	6 cut(s)	271, 856, 1013, 1334, 1795, 2104
Hpy99I	CGWCG	1 cut(s)	985
HpyAV	CCTTC	8 cut(s)	73, 413, 553, 826, 979, 1456, 1497, 1588
HpyCH4III	ACNGT	7 cut(s)	26, 268, 714, 1384, 1786, 1831, 2243
HpyCH4IV	ACGT	1 cut(s)	840
HpyF10VI	GCNNNNNNNGC	7 cut(s)	458, 527, 947, 968, 1253, 1613, 1622
HpyF3I	CTNAG	6 cut(s)	177, 1007, 1123, 1404, 1703, 1716
HpySE526I	ACGT	1 cut(s)	840
KpnI	GGTACC	1 cut(s)	1759
Kzo9I	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
LmnI	GCTCC	4 cut(s)	14, 370, 733, 1252
Lsp1109I	GCAGC	8 cut(s)	407, 433, 461, 745, 1265, 1554, 1616, 1619
LweI	GCATC	4 cut(s)	821, 1078, 1156, 1745
MabI	ACCWGGT	2 cut(s)	233, 1327
MaeI	CTAG	1 cut(s)	1056
MaeII	ACGT	1 cut(s)	840
MaeIII	GTNAC	5 cut(s)	172, 688, 901, 1195, 1323
MalI	GATC	8 cut(s)	83, 104, 153, 228, 577, 1020, 1309, 1540
MboI	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
MboII	GAAGA	6 cut(s)	58, 103, 529, 1471, 1839, 2192
MflI	RGATCY	1 cut(s)	575
MhlI	GDGCHC	4 cut(s)	11, 749, 858, 1175
MlyI	GAGTC	2 cut(s)	180, 403
MmeI	TCCRAC	3 cut(s)	45, 757, 1046
Mph1103I	ATGCAT	3 cut(s)	672, 1262, 1699
MroXI	GAANNNNTTC	2 cut(s)	44, 2159
MslI	CAYNNNNRTG	4 cut(s)	1109, 1653, 1741, 1769
MspA1I	CMGCKG	2 cut(s)	446, 1133
MspCI	CTTAAG	1 cut(s)	2014
MspR9I	CCNGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
Mva1269I	GAATGC	2 cut(s)	46, 1118
MvaI	CCWGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
MwoI	GCNNNNNNNGC	7 cut(s)	458, 527, 947, 968, 1253, 1613, 1622
NcoI	CCATGG	1 cut(s)	1770
NdeII	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
NheI	GCTAGC	1 cut(s)	1055
NlaIV	GGNNCC	8 cut(s)	10, 298, 468, 577, 768, 1576, 1757, 2004
NmuCI	GTSAC	3 cut(s)	172, 688, 901
NsiI	ATGCAT	3 cut(s)	672, 1262, 1699
NspI	RCATGY	3 cut(s)	674, 1149, 1260
PaeI	GCATGC	2 cut(s)	1149, 1260
PagI	TCATGA	1 cut(s)	792
PctI	GAATGC	2 cut(s)	46, 1118
PdmI	GAANNNNTTC	2 cut(s)	44, 2159
PfeI	GAWTC	1 cut(s)	2320
PflMI	CCANNNNNTGG	1 cut(s)	2206
PkrI	GCNGC	9 cut(s)	397, 448, 451, 760, 1255, 1569, 1606, 1609, 1864
PleI	GAGTC	2 cut(s)	179, 403
PmaCI	CACGTG	1 cut(s)	841
PmlI	CACGTG	1 cut(s)	841
PpsI	GAGTC	2 cut(s)	179, 403
Ppu21I	YACGTR	1 cut(s)	841
PshBI	ATTAAT	2 cut(s)	1107, 1947
Psp124BI	GAGCTC	1 cut(s)	1175
Psp6I	CCWGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
PspCI	CACGTG	1 cut(s)	841
PspFI	CCCAGC	1 cut(s)	1570
PspGI	CCWGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
PspN4I	GGNNCC	8 cut(s)	10, 298, 468, 577, 768, 1576, 1757, 2004
PspPI	GGNCC	3 cut(s)	466, 1086, 1966
PstI	CTGCAG	1 cut(s)	451
PstNI	CAGNNNCTG	1 cut(s)	184
PsuI	RGATCY	1 cut(s)	575
PvuII	CAGCTG	2 cut(s)	446, 1133
RsaI	GTAC	9 cut(s)	28, 128, 716, 954, 1040, 1242, 1757, 1837, 2078
RsaNI	GTAC	9 cut(s)	27, 127, 715, 953, 1039, 1241, 1756, 1836, 2077
RseI	CAYNNNNRTG	4 cut(s)	1109, 1653, 1741, 1769
SacI	GAGCTC	1 cut(s)	1175
SatI	GCNGC	9 cut(s)	396, 447, 450, 759, 1254, 1568, 1605, 1608, 1863
Sau3AI	GATC	8 cut(s)	81, 102, 151, 226, 575, 1018, 1307, 1538
Sau96I	GGNCC	3 cut(s)	466, 1086, 1966
ScaI	AGTACT	1 cut(s)	954
SchI	GAGTC	2 cut(s)	180, 403
ScrFI	CCNGG	6 cut(s)	235, 276, 391, 605, 1329, 1807
SduI	GDGCHC	4 cut(s)	11, 749, 858, 1175
SexAI	ACCWGGT	2 cut(s)	233, 1327
SfaNI	GCATC	4 cut(s)	821, 1078, 1156, 1745
SfcI	CTRYAG	3 cut(s)	447, 489, 1476
SinI	GGWCC	2 cut(s)	466, 1966
SmiMI	CAYNNNNRTG	4 cut(s)	1109, 1653, 1741, 1769
SmlI	CTYRAG	4 cut(s)	34, 1444, 1532, 2014
SmoI	CTYRAG	4 cut(s)	34, 1444, 1532, 2014
SphI	GCATGC	2 cut(s)	1149, 1260
SsiI	CCGC	4 cut(s)	1780, 1863, 2231, 2295
SspI	AATATT	1 cut(s)	328
SspMI	CTAG	1 cut(s)	1056
SstI	GAGCTC	1 cut(s)	1175
StyD4I	CCNGG	6 cut(s)	233, 274, 389, 603, 1327, 1805
StyI	CCWWGG	1 cut(s)	1770
TaaI	ACNGT	7 cut(s)	26, 268, 714, 1384, 1786, 1831, 2243
TaiI	ACGT	1 cut(s)	843
TaqI	TCGA	5 cut(s)	101, 229, 697, 1501, 2273
TaqII	GACCGA	2 cut(s)	474, 1424
TatI	WGTACW	4 cut(s)	714, 952, 1038, 2076
TauI	GCSGC	1 cut(s)	1865
TfiI	GAWTC	1 cut(s)	2320
TscAI	CASTG	6 cut(s)	570, 1387, 1395, 1771, 1789, 1942
TseFI	GTSAC	3 cut(s)	172, 688, 901
TseI	GCWGC	8 cut(s)	395, 446, 449, 758, 1253, 1567, 1604, 1607
Tsp45I	GTSAC	3 cut(s)	172, 688, 901
TspDTI	ATGAA	5 cut(s)	58, 309, 525, 1410, 1580
TspGWI	ACGGA	4 cut(s)	95, 1958, 2123, 2313
TspRI	CASTG	6 cut(s)	570, 1387, 1395, 1771, 1789, 1942
Van91I	CCANNNNNTGG	1 cut(s)	2206
Vha464I	CTTAAG	1 cut(s)	2014
VneI	GTGCAC	1 cut(s)	854
VpaK11BI	GGWCC	2 cut(s)	466, 1966
VspI	ATTAAT	2 cut(s)	1107, 1947
XapI	RAATTY	4 cut(s)	316, 1341, 1872, 1952
XceI	RCATGY	3 cut(s)	674, 1149, 1260
XmiI	GTMKAC	1 cut(s)	1012
XmnI	GAANNNNTTC	2 cut(s)	44, 2159
XspI	CTAG	1 cut(s)	1056
ZrmI	AGTACT	1 cut(s)	954
Zsp2I	ATGCAT	3 cut(s)	672, 1262, 1699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.