RchiOBHm_Chr2g0105021

Transmembrane protein 131-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
16303962 .. 16309715
5754 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47926

Sequence Viewer

Length: 3960 bp
ATGGAGCTCAAAACCCTAACAATCACACCATCTCCGAAGCACCACCAGCACCTCTCTCTCTTCCGCCACAGGGGATTGCCAGTTTCAACCAAAGCAGTCCTGGTTCTTGTGGTTTTAGCATGTACCCTTTTCTGCTTGGTGACATGTGAAAGCTTTGGTGATGGGTTGCATAAATTACTAGAAAATGATGACTGTGGCTTATATGGAGATAACTTTGATGTAGCTCGTGCAGATAGTTTTCTTAGGGATACCCCCTCGGGCTGTGGAATGCAAAAAGGCCACTTCAACTCTGAGAGTGTTTGTTCGAGTTCTCTTTCATTCTGCTTTCCGTCAACATTACCCGGTTTTTGGGAGCATAAGCTCAAACTTGCTGATTTAGACGTTTCTGGGAGTCAGTCTGATCATCTATCATCTGAGAACAGCAATTTGGCAAGTAACAAAAGCTGGTCATCAGATAACGGTATGTTTAAGTTATTTAATGGGGGGATAGTTTCTTGTTCTTTGATCTCCAAAGAGGCTGCTAATGAGTTTTCATCCATTCAAACCGATAGTGCTAATCAAAATGATCTTTCTTCCTGTAGAGGGCCTTTGCTCTATCAGAAAAGCACAAGTTATAGGTCAGACAAGACCACTGAGATGACCAAATCTAATTCTTTTGGTGGTTCTTCCTCACCCCATGTAGAAATTACCCCTGCTGTGTTAGATTGGGGGCAAAAGTATATGTATTTTCCTTCCTTGGCTTTCTTAACTGTGGCAAATACATGCAATGACAGCATTTTACATGTTTATGAGCCATTCAGTTCCGACATACAGTTCTATCCTTGCAATCTTAGTGAGGCTGTGTTAGGACCTGGTGAAATAGCTTCAATTTGTTTTGTGTTCTTACCTAGATGGTTGGGCCCATCCTTTGCTCAAATCATTTTGCAGACAAGTTTTGGTGGTTTCTTGATTCAGGCTAAAGGATTTTCCATTGAGTCCCCTTATGGAATTCACCCTTTATCAGGCCCGGATGTTTCTTCCAGGGGAAGGTGGAGTAAGAATCTGTCTTTGTTTAATTCCTTTGATCAACATTTCCATGTGGAGGAAGTAACTGCATGGATATCAGTGTCTCTAGAGCATACTTCCCATATTGCAGAGGCAGCATGTAGCACCAGAAGAGATCAAGGTTTGAATGAGCTTGGTGTACCGAATGTTAAAGATCGTCTTGTTGTGCGTACTGGTCAGGTTGGTTTGCCTCTGCTGGCAATGAGGCCCCTTAGGAACTGGGAGATTGGTCCCCACAGCAGTGAAACCATCATAGAAATAGACTTCTCAATTGAATCTAAAGGAAAGATTTTTGGTGCAATTTGTATGCAGTTGCTAAGATCTTCACAGGACAAGTCTGAGACTATTATGCTTCCTTTTGAAGCTGAATTAGACGGAATGGCAATGAATGATGATCTTGCAGGACCTATCATAGCATCTCTTGAGGTTTTACACCCATGGGCTGGCAATGAAGCTGTTGTTGCTATATCTCTGAAAAACTGTGCGCCTTATATTCTGAGAGTTCTTGAAATAACTGAGATTGCAGATAGCAAAATCTTCCAGATCAAGTACAATGAGGGCCTACTGCTTTTCCCCGGCACTGACACATATGTAGCCATAGTTACTTGTACTCACCTGCATGTTGAAGATGGACAGTGTAAATTACTTGTACTGACAAATGACTCAAGCAGCTCACAGATTGAAGTTCCTTGCGAGGATGTTGTCCAAATTTGTTCCAGACACTGGAAAGATTCCACTGTTGAATATGAACATCAGTCTGAAAGGAGCGAATCTGGTGATTTGAAGACAGTGTTTTCTGACAGTAGCATGCAGCTTCCATCACAAACCATGGCAATGGATGCAGCAGGGGAAGCAGATGAATTGGTGCTACGAAACTGGAAATCTCAAGATACCAGAAGTGGCATGTCTGTGCTTGATGATCATGAGGTATTGTTCCCAATGCTTCAGGTGGGAAGTCATTATTCTAAGTGGATCAATGTAAAGAATCCTAGCCAAGAGCCAGTTGTAATGCAGCTTATACTAAACTCAGGAGAGATTATTGATCAATGCAAGAGCCCAGATGGTCTTATACAGCCTCCTTCATCTGGTAGTTTGGTTTGTGAAAAATCTCCTTTTCCGAGTAGGTATGGGTTCTCAATAGCAGAAAGTGCATTGACGGAAGCTTTTGTCCTTCCTAATGGTAGAGCATCTCTTGGACCATTATTGTTTCAACCTTCAAATCGATGTGAGTGGAGGAGTTCAGCCTTGATAAGAAACAATCTATCTGGTGTGGAGTGGTTACCTCTGAGGGGCATTGGAGGGTCACTTTCTTTGCTGCTGCTTGAAGAATCTCAGCCTATTCAGAGTGTAGAGTTCAACCTCAGCTTGCCAATTCCTCTCAACATTTCTTCCCCAGACATGTTACTTCATGTGGAAGATACCACTCGTTCTTGTTTACAGCCATTGTCAAAAGAACTCTATGCTAAGAATACTGGGGACTTGCCACTGGAAGTTACAAGAATCAAAGTGTCCGGAAAAGAGTGCAGGATGGATGGGTTTATGGTGCAGCCTTGCAAAGGTTTTTCTCTCCAACCTGGAGAATCAGCAAAGCTTCTAATATCATACCAGACTGATTTTTCTGCACCATTGGTACAAAGAGATCTTGAGCTGGCCTTGGCAACTGGTATTCTTGTGATACCCATGAAGGCAAACCTCCCGTTGTATATGCTCAATACATGCAGGAAATCAGTGTTCTGGACGCGCATTAAAAAATACTCTGCGGCGGTTTTTTGTATCGGCTCCTTGATGTTTCTTGTACTGTGGTATATATTCTCCCAGGTGTTCGTCCTTTCCTCCCATGATTGTTTGTGCGCGAGCAGAAAAAGTTCCTTGGATACTTCTACAAGTGCGGCAGGAAAATGTGACGTGCATAGCTATAGAAACAGTAAATTTTCTGTGTCCAGTGAAACAAATAGCTTGTTAAGATCATTTCGGGAAGATAGAACCTTGATGCAGGCATCTGTAGGTGGATATCCTCATAAGCAGGCAGAGACCTTAGACCAGGAAAAGTCTGATCATCATGCTAAACAAAGACTACAAGTTCCTAAACAAACACATGATTTGTCAGATACACCAAAGAATAAAGGGATGGCCATCTCACTGACATCTGAATCTGCATTACTTGAGAATTCTGATGAACTAGAAGCTTCTGAACTGGGTAACCTTACTGTTAAAACTGGAAAGGAAAAGGGAAGAAGGCGTAGGAAGAGAAAGAGCACTGGTTCCAAATTAGCAGGACTTCTTGAACTTTCAAGTAGTCAGAGTGGAAATTCTACTCCTTCATCACCATTGTCTCCAGTCACATCTGTAATACCAAAGCAGACGTGGCAGCTATCTCCTGATGCGGGCCAAGTGGTTGAGGCTAGGAATCCTTTTACTCATGCAGCTCACCAACGCTGTCAGAAGAGTCATGTTTTTAAATCTGCTTCGAAGGCAAACTTATCAGAGCCTGGGGTTTCTTTGAAGTATTGCAATAGCCACCCAACTTTTCCTTCTCAAGAGCAGCCTTCAGCCCCAAGAGAAACTCTGGCAAGACCTGTTTTGTTGCCTTCTGCCACCTTTCCTTGTGCCGGCAGGCCTACACCTATTATGGGAAGCTCAGCTATTTCTCCACATGCTAGAGCCCCTGGGTCCAAACTCAATGACCGGAAAAATGTCAGAGCAGAAGAAAAAACTCGGCTTGGGGATGAATATACATATGATATCTGGGGTGATCACTTTCCTAGGCTTAATTTGTTGGGTAAGTCAAAGGATACCAATTCTCTGAGCTCCAGCAATACAGAGAGTGACCCTGATAGCTTCTTTGTAAAGGGCCCACAAACCCTCATGACAAACTCTCCACCAAGATCTGTAAGTTATTTCCATCAAGAGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1319

Amino Acids

144.99

Weight (kDa)

6.06

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMEM131_like_N PF12371 227 - 310 2.4e-22 Transmembrane protein 131-like N-terminal
DUF7579 PF24474 484 - 590 1.6e-40 Domain of unknown function (DUF7579)
Ig_TMEM131L_5 PF24501 838 - 903 1.3e-23 TMEM131L fifth Ig-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012944)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1668
Acc36I ACCTGC 1 cut(s) 1668
AccB7I CCANNNNNTGG 2 cut(s) 1487, 1767
AccII CGCG 2 cut(s) 2785, 2897
AccIII TCCGGA 1 cut(s) 2555
AciI CCGC 5 cut(s) 64, 2804, 2807, 2933, 3428
AclWI GGATC 1 cut(s) 2024
AcoI YGGCCR 1 cut(s) 3174
AcsI RAATTY 5 cut(s) 987, 1752, 2972, 3211, 3352
AcuI CTGAAG 2 cut(s) 1973, 3576
AfaI GTAC 8 cut(s) 124, 1185, 1216, 1595, 1654, 1695, 2676, 2841
AflIII ACRYGT 3 cut(s) 143, 781, 2442
AjiI CACGTC 2 cut(s) 2950, 3408
AjnI CCWGG 8 cut(s) 99, 850, 1019, 2617, 2859, 3084, 3532, 3709
AjuI GAANNNNNNNTTGG 4 cut(s) 410, 442, 3559, 3591
AleI CACNNNNGTG 1 cut(s) 1284
Alw21I GWGCWC 3 cut(s) 9, 3302, 3854
Alw26I GTCTC 4 cut(s) 1113, 1379, 3068, 3381
AlwI GGATC 1 cut(s) 2024
AlwNI CAGNNNCTG 2 cut(s) 1767, 3533
Ama87I CYCGRG 1 cut(s) 256
Aor13HI TCCGGA 1 cut(s) 2555
ApaI GGGCCC 2 cut(s) 902, 3899
ApoI RAATTY 5 cut(s) 987, 1752, 2972, 3211, 3352
Asp700I GAANNNNTTC 1 cut(s) 2908
AspA2I CCTAGG 1 cut(s) 3806
AspLEI GCGC 3 cut(s) 1531, 2787, 2897
AsuC2I CCSGG 3 cut(s) 342, 1007, 1620
AsuII TTCGAA 1 cut(s) 3512
AvaI CYCGRG 1 cut(s) 256
AvaII GGWCC 5 cut(s) 848, 1274, 1448, 2240, 3714
AvrII CCTAGG 1 cut(s) 3806
AxyI CCTNAGG 1 cut(s) 1256
BaeGI GKGCMC 2 cut(s) 902, 3899
BalI TGGCCA 1 cut(s) 3176
BanII GRGCYC 6 cut(s) 9, 902, 2102, 3709, 3854, 3899
BauI CACGAG 1 cut(s) 225
BbsI GAAGAC 1 cut(s) 1835
Bbv12I GWGCWC 3 cut(s) 9, 3302, 3854
BbvCI CCTCAGC 1 cut(s) 2405
BciT130I CCWGG 8 cut(s) 101, 852, 1021, 2619, 2861, 3086, 3534, 3711
BciVI GTATCC 3 cut(s) 241, 2911, 3829
BclI TGATCA 6 cut(s) 400, 1063, 1963, 2086, 3097, 3796
BcnI CCSGG 3 cut(s) 342, 1007, 1620
BcoDI GTCTC 4 cut(s) 1113, 1379, 3068, 3381
BfaI CTAG 8 cut(s) 179, 888, 1112, 2034, 3224, 3447, 3702, 3807
BfmI CTRYAG 3 cut(s) 577, 2959, 3045
BfuAI ACCTGC 1 cut(s) 1668
BfuI GTATCC 3 cut(s) 241, 2911, 3829
BglII AGATCT 3 cut(s) 1364, 2683, 3929
BlnI CCTAGG 1 cut(s) 3806
BlpI GCTNAGC 1 cut(s) 3682
Bme18I GGWCC 5 cut(s) 848, 1274, 1448, 2240, 3714
BmeT110I CYCGRG 1 cut(s) 256
BmgBI CACGTC 2 cut(s) 2950, 3408
BmiI GGNNCC 7 cut(s) 900, 1253, 1276, 2824, 3307, 3715, 3897
BmrI ACTGGG 3 cut(s) 1273, 2526, 3248
BmsI GCATC 6 cut(s) 1469, 1873, 2240, 3024, 3050, 3415
BmuI ACTGGG 3 cut(s) 1273, 2526, 3248
BpiI GAAGAC 1 cut(s) 1835
BpmI CTGGAG 3 cut(s) 2640, 3363, 3838
Bpu10I CCTNAGC 1 cut(s) 2405
Bpu1102I GCTNAGC 1 cut(s) 3682
Bpu14I TTCGAA 1 cut(s) 3512
BpuEI CTTGAG 6 cut(s) 1487, 1693, 1914, 2708, 3227, 3564
BpuMI CCSGG 3 cut(s) 342, 1007, 1620
Bsa29I ATCGAT 1 cut(s) 2266
BsaBI GATNNNNATC 1 cut(s) 3176
BsaI GGTCTC 1 cut(s) 3068
BsaWI WCCGGW 2 cut(s) 2555, 3729
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 3904, 3934
Bse118I RCCGGY 1 cut(s) 3653
Bse21I CCTNAGG 1 cut(s) 1256
Bse3DI GCAATG 5 cut(s) 772, 1251, 1434, 1498, 1884
Bse8I GATNNNNATC 1 cut(s) 3176
BseAI TCCGGA 1 cut(s) 2555
BseBI CCWGG 8 cut(s) 101, 852, 1021, 2619, 2861, 3086, 3534, 3711
BseCI ATCGAT 1 cut(s) 2266
BseGI GGATG 9 cut(s) 533, 902, 1015, 1747, 1888, 2577, 2581, 3177, 3775
BseJI GATNNNNATC 1 cut(s) 3176
BseMI GCAATG 5 cut(s) 772, 1251, 1434, 1498, 1884
BseRI GAGGAG 1 cut(s) 2293
BseSI GKGCMC 2 cut(s) 902, 3899
BsgI GTGCAG 4 cut(s) 249, 2587, 2609, 2649
Bsh1236I CGCG 2 cut(s) 2785, 2897
BshVI ATCGAT 1 cut(s) 2266
BsiHKAI GWGCWC 3 cut(s) 9, 3302, 3854
BsiHKCI CYCGRG 1 cut(s) 256
BsiSI CCGG 6 cut(s) 342, 1007, 1620, 2556, 3654, 3730
BslFI GGGAC 3 cut(s) 961, 1260, 2534
BsmAI GTCTC 4 cut(s) 1113, 1379, 3068, 3381
BsmFI GGGAC 3 cut(s) 961, 1260, 2534
BsmI GAATGC 1 cut(s) 273
Bso31I GGTCTC 1 cut(s) 3068
BsoBI CYCGRG 1 cut(s) 256
Bsp119I TTCGAA 1 cut(s) 3512
Bsp120I GGGCCC 2 cut(s) 898, 3895
Bsp1286I GDGCHC 7 cut(s) 9, 902, 2102, 3302, 3709, 3854, 3899
Bsp13I TCCGGA 1 cut(s) 2555
Bsp1720I GCTNAGC 1 cut(s) 3682
Bsp19I CCATGG 2 cut(s) 1481, 1872
BspACI CCGC 5 cut(s) 64, 2804, 2807, 2933, 3428
BspDI ATCGAT 1 cut(s) 2266
BspEI TCCGGA 1 cut(s) 2555
BspFNI CGCG 2 cut(s) 2785, 2897
BspHI TCATGA 2 cut(s) 1966, 3909
BspLI GGNNCC 7 cut(s) 900, 1253, 1276, 2824, 3307, 3715, 3897
BspMI ACCTGC 1 cut(s) 1668
BspPI GGATC 1 cut(s) 2024
BspT104I TTCGAA 1 cut(s) 3512
BspTNI GGTCTC 1 cut(s) 3068
BsrDI GCAATG 5 cut(s) 772, 1251, 1434, 1498, 1884
BsrFI RCCGGY 1 cut(s) 3653
BssAI RCCGGY 1 cut(s) 3653
BssSI CACGAG 1 cut(s) 225
BssT1I CCWWGG 6 cut(s) 735, 1481, 1872, 2697, 2913, 3806
Bst2BI CACGAG 1 cut(s) 225
Bst2UI CCWGG 8 cut(s) 101, 852, 1021, 2619, 2861, 3086, 3534, 3711
Bst6I CTCTTC 4 cut(s) 65, 1150, 3284, 3482
BstAPI GCANNNNNTGC 2 cut(s) 1883, 2192
BstBI TTCGAA 1 cut(s) 3512
BstDSI CCRYGG 2 cut(s) 1481, 1872
BstEII GGTNACC 2 cut(s) 2322, 3242
BstENI CCTNNNNNAGG 2 cut(s) 999, 2598
BstF5I GGATG 9 cut(s) 533, 902, 1015, 1747, 1888, 2577, 2581, 3177, 3775
BstFNI CGCG 2 cut(s) 2785, 2897
BstHHI GCGC 3 cut(s) 1531, 2787, 2897
BstMAI GTCTC 4 cut(s) 1113, 1379, 3068, 3381
BstMWI GCNNNNNNNGC 9 cut(s) 46, 771, 1139, 1505, 1883, 1895, 2192, 3409, 3515
BstNI CCWGG 8 cut(s) 101, 852, 1021, 2619, 2861, 3086, 3534, 3711
BstPI GGTNACC 2 cut(s) 2322, 3242
BstSFI CTRYAG 3 cut(s) 577, 2959, 3045
BstSLI GKGCMC 2 cut(s) 902, 3899
BstUI CGCG 2 cut(s) 2785, 2897
BstV2I GAAGAC 1 cut(s) 1835
BstX2I RGATCY 3 cut(s) 1364, 2683, 3929
BstXI CCANNNNNNTGG 1 cut(s) 1879
BstYI RGATCY 3 cut(s) 1364, 2683, 3929
Bsu15I ATCGAT 1 cut(s) 2266
Bsu36I CCTNAGG 1 cut(s) 1256
BsuI GTATCC 3 cut(s) 241, 2911, 3829
BsuTUI ATCGAT 1 cut(s) 2266
BtgI CCRYGG 2 cut(s) 1481, 1872
BtrI CACGTC 2 cut(s) 2950, 3408
BtsCI GGATG 9 cut(s) 533, 902, 1015, 1747, 1888, 2577, 2581, 3177, 3775
BtsI GCAGTG 1 cut(s) 1291
BveI ACCTGC 1 cut(s) 1668
CaiI CAGNNNCTG 2 cut(s) 1767, 3533
CciI TCATGA 2 cut(s) 1966, 3909
CfoI GCGC 3 cut(s) 1531, 2787, 2897
Cfr10I RCCGGY 1 cut(s) 3653
ClaI ATCGAT 1 cut(s) 2266
CseI GACGC 1 cut(s) 2791
CsiI ACCWGGT 1 cut(s) 850
Csp6I GTAC 8 cut(s) 123, 1184, 1215, 1594, 1653, 1694, 2675, 2840
CviQI GTAC 8 cut(s) 123, 1184, 1215, 1594, 1653, 1694, 2675, 2840
DraI TTTAAA 1 cut(s) 3502
EaeI YGGCCR 1 cut(s) 3174
Eam1104I CTCTTC 4 cut(s) 65, 1150, 3284, 3482
EarI CTCTTC 4 cut(s) 65, 1150, 3284, 3482
EciI GGCGGA 1 cut(s) 53
Ecl136II GAGCTC 2 cut(s) 7, 3852
Eco130I CCWWGG 6 cut(s) 735, 1481, 1872, 2697, 2913, 3806
Eco147I AGGCCT 1 cut(s) 3661
Eco24I GRGCYC 6 cut(s) 9, 902, 2102, 3709, 3854, 3899
Eco31I GGTCTC 1 cut(s) 3068
Eco32I GATATC 3 cut(s) 1101, 3056, 3787
Eco47I GGWCC 5 cut(s) 848, 1274, 1448, 2240, 3714
Eco53kI GAGCTC 2 cut(s) 7, 3852
Eco57I CTGAAG 2 cut(s) 1973, 3576
Eco81I CCTNAGG 1 cut(s) 1256
Eco88I CYCGRG 1 cut(s) 256
Eco91I GGTNACC 2 cut(s) 2322, 3242
EcoICRI GAGCTC 2 cut(s) 7, 3852
EcoNI CCTNNNNNAGG 2 cut(s) 999, 2598
EcoO109I RGGNCCY 6 cut(s) 584, 848, 1251, 1448, 1603, 3895
EcoO65I GGTNACC 2 cut(s) 2322, 3242
EcoRI GAATTC 2 cut(s) 987, 3211
EcoRII CCWGG 8 cut(s) 99, 850, 1019, 2617, 2859, 3084, 3532, 3709
EcoRV GATATC 3 cut(s) 1101, 3056, 3787
EcoT14I CCWWGG 6 cut(s) 735, 1481, 1872, 2697, 2913, 3806
EcoT38I GRGCYC 6 cut(s) 9, 902, 2102, 3709, 3854, 3899
ErhI CCWWGG 6 cut(s) 735, 1481, 1872, 2697, 2913, 3806
FalI AAGNNNNNCTT 4 cut(s) 1188, 1220, 3506, 3538
FaqI GGGAC 3 cut(s) 961, 1260, 2534
FauI CCCGC 1 cut(s) 3421
FauNDI CATATG 2 cut(s) 1633, 3781
FbaI TGATCA 6 cut(s) 400, 1063, 1963, 2086, 3097, 3796
FokI GGATG 9 cut(s) 520, 889, 1022, 1754, 1895, 2584, 2588, 3184, 3782
FriOI GRGCYC 6 cut(s) 9, 902, 2102, 3709, 3854, 3899
FspBI CTAG 8 cut(s) 179, 888, 1112, 2034, 3224, 3447, 3702, 3807
GlaI GCGC 3 cut(s) 1530, 2786, 2896
GsuI CTGGAG 3 cut(s) 2640, 3363, 3838
HapII CCGG 6 cut(s) 342, 1007, 1620, 2556, 3654, 3730
HgaI GACGC 1 cut(s) 2791
HhaI GCGC 3 cut(s) 1531, 2787, 2897
Hin6I GCGC 3 cut(s) 1529, 2785, 2895
HinP1I GCGC 3 cut(s) 1529, 2785, 2895
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HindIII AAGCTT 4 cut(s) 151, 2205, 2633, 3228
HpaII CCGG 6 cut(s) 342, 1007, 1620, 2556, 3654, 3730
Hpy166II GTNNAC 3 cut(s) 333, 1184, 2480
Hpy8I GTNNAC 3 cut(s) 333, 1184, 2480
HpyCH4IV ACGT 3 cut(s) 381, 2949, 3407
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 771, 1139, 1505, 1883, 1895, 2192, 3409, 3515
HpySE526I ACGT 3 cut(s) 381, 2949, 3407
HspAI GCGC 3 cut(s) 1529, 2785, 2895
Kpn2I TCCGGA 1 cut(s) 2555
KroI GCCGGC 1 cut(s) 3653
KroNI GCCGGC 1 cut(s) 3655
Ksp22I TGATCA 6 cut(s) 400, 1063, 1963, 2086, 3097, 3796
LmnI GCTCC 5 cut(s) 4, 352, 1809, 2828, 3857
LweI GCATC 6 cut(s) 1469, 1873, 2240, 3024, 3050, 3415
MabI ACCWGGT 1 cut(s) 850
MaeI CTAG 8 cut(s) 179, 888, 1112, 2034, 3224, 3447, 3702, 3807
MaeII ACGT 3 cut(s) 381, 2949, 3407
MfeI CAATTG 1 cut(s) 1314
MflI RGATCY 3 cut(s) 1364, 2683, 3929
MhlI GDGCHC 7 cut(s) 9, 902, 2102, 3302, 3709, 3854, 3899
MlsI TGGCCA 1 cut(s) 3176
MluNI TGGCCA 1 cut(s) 3176
MlyI GAGTC 4 cut(s) 400, 983, 1700, 3499
MmeI TCCRAC 2 cut(s) 828, 2638
Mox20I TGGCCA 1 cut(s) 3176
MroI TCCGGA 1 cut(s) 2555
MroNI GCCGGC 1 cut(s) 3653
MroXI GAANNNNTTC 1 cut(s) 2908
MscI TGGCCA 1 cut(s) 3176
MslI CAYNNNNRTG 7 cut(s) 635, 786, 1074, 1284, 1662, 1877, 1952
Msp20I TGGCCA 1 cut(s) 3176
MspI CCGG 6 cut(s) 342, 1007, 1620, 2556, 3654, 3730
MunI CAATTG 1 cut(s) 1314
Mva1269I GAATGC 1 cut(s) 273
MvaI CCWGG 8 cut(s) 101, 852, 1021, 2619, 2861, 3086, 3534, 3711
MvnI CGCG 2 cut(s) 2785, 2897
MwoI GCNNNNNNNGC 9 cut(s) 46, 771, 1139, 1505, 1883, 1895, 2192, 3409, 3515
NaeI GCCGGC 1 cut(s) 3655
NciI CCSGG 3 cut(s) 342, 1007, 1620
NcoI CCATGG 2 cut(s) 1481, 1872
NdeI CATATG 2 cut(s) 1633, 3781
NgoMIV GCCGGC 1 cut(s) 3653
NlaIV GGNNCC 7 cut(s) 900, 1253, 1276, 2824, 3307, 3715, 3897
NmeAIII GCCGAG 1 cut(s) 3739
NmuCI GTSAC 5 cut(s) 139, 2346, 2945, 3382, 3869
NspV TTCGAA 1 cut(s) 3512
OliI CACNNNNGTG 1 cut(s) 1284
PaeI GCATGC 1 cut(s) 1855
PagI TCATGA 2 cut(s) 1966, 3909
PaqCI CACCTGC 1 cut(s) 1668
PasI CCCWGGG 1 cut(s) 3710
PceI AGGCCT 1 cut(s) 3661
PciI ACATGT 3 cut(s) 143, 781, 2442
PctI GAATGC 1 cut(s) 273
PdiI GCCGGC 1 cut(s) 3655
PdmI GAANNNNTTC 1 cut(s) 2908
PflMI CCANNNNNTGG 2 cut(s) 1487, 1767
PleI GAGTC 4 cut(s) 399, 982, 1700, 3498
PpsI GAGTC 4 cut(s) 399, 982, 1700, 3498
PpuMI RGGWCCY 2 cut(s) 848, 1448
PscI ACATGT 3 cut(s) 143, 781, 2442
Psp124BI GAGCTC 2 cut(s) 9, 3854
Psp5II RGGWCCY 2 cut(s) 848, 1448
Psp6I CCWGG 8 cut(s) 99, 850, 1019, 2617, 2859, 3084, 3532, 3709
PspEI GGTNACC 2 cut(s) 2322, 3242
PspGI CCWGG 8 cut(s) 99, 850, 1019, 2617, 2859, 3084, 3532, 3709
PspN4I GGNNCC 7 cut(s) 900, 1253, 1276, 2824, 3307, 3715, 3897
PspOMI GGGCCC 2 cut(s) 898, 3895
PspPPI RGGWCCY 2 cut(s) 848, 1448
PstNI CAGNNNCTG 2 cut(s) 1767, 3533
PsuI RGATCY 3 cut(s) 1364, 2683, 3929
RsaI GTAC 8 cut(s) 124, 1185, 1216, 1595, 1654, 1695, 2676, 2841
RsaNI GTAC 8 cut(s) 123, 1184, 1215, 1594, 1653, 1694, 2675, 2840
RseI CAYNNNNRTG 7 cut(s) 635, 786, 1074, 1284, 1662, 1877, 1952
SacI GAGCTC 2 cut(s) 9, 3854
SchI GAGTC 4 cut(s) 400, 983, 1700, 3499
SduI GDGCHC 7 cut(s) 9, 902, 2102, 3302, 3709, 3854, 3899
SexAI ACCWGGT 1 cut(s) 850
SfaNI GCATC 6 cut(s) 1469, 1873, 2240, 3024, 3050, 3415
SfcI CTRYAG 3 cut(s) 577, 2959, 3045
SfuI TTCGAA 1 cut(s) 3512
SinI GGWCC 5 cut(s) 848, 1274, 1448, 2240, 3714
SmiMI CAYNNNNRTG 7 cut(s) 635, 786, 1074, 1284, 1662, 1877, 1952
SmlI CTYRAG 6 cut(s) 1466, 1708, 1929, 2687, 3206, 3579
SmoI CTYRAG 6 cut(s) 1466, 1708, 1929, 2687, 3206, 3579
SphI GCATGC 1 cut(s) 1855
SseBI AGGCCT 1 cut(s) 3661
SsiI CCGC 5 cut(s) 64, 2804, 2807, 2933, 3428
SspMI CTAG 8 cut(s) 179, 888, 1112, 2034, 3224, 3447, 3702, 3807
SstI GAGCTC 2 cut(s) 9, 3854
StuI AGGCCT 1 cut(s) 3661
StyI CCWWGG 6 cut(s) 735, 1481, 1872, 2697, 2913, 3806
TaiI ACGT 3 cut(s) 384, 2952, 3410
TaqI TCGA 3 cut(s) 305, 2266, 3512
TatI WGTACW 4 cut(s) 1593, 1652, 1693, 2839
TauI GCSGC 2 cut(s) 2807, 2936
TseFI GTSAC 5 cut(s) 139, 2346, 2945, 3382, 3869
Tsp45I GTSAC 5 cut(s) 139, 2346, 2945, 3382, 3869
TspGWI ACGGA 3 cut(s) 318, 1434, 2216
Van91I CCANNNNNTGG 2 cut(s) 1487, 1767
VpaK11BI GGWCC 5 cut(s) 848, 1274, 1448, 2240, 3714
XagI CCTNNNNNAGG 2 cut(s) 999, 2598
XapI RAATTY 5 cut(s) 987, 1752, 2972, 3211, 3352
XbaI TCTAGA 1 cut(s) 1111
XcmI CCANNNNNNNNNTGG 2 cut(s) 97, 3405
XmaJI CCTAGG 1 cut(s) 3806
XmnI GAANNNNTTC 1 cut(s) 2908
XspI CTAG 8 cut(s) 179, 888, 1112, 2034, 3224, 3447, 3702, 3807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.