RchiOBHm_Chr2g0127781

G-type lectin S-receptor-like serine threonine-protein kinase At2g19130

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
42632963 .. 42633196
234 bp
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UTR
Exon/CDS
Intron
PRQ49962

Sequence Viewer

Length: 234 bp
ATGCAAAGTAGTGTGTTGGTGTATTCAGGTGATGAGAAGGATAGGCCAACAATGAGGCAGGTTGTTCAAATTCTTGAGGGAGTTTTAGATGTTAGTGTATCCCCAATCCCACAGCTCCTCCAGCGCCTTACAGAAAGTATAGTGGAAGTGACTTCCAGGAGACCTACTTCCTGTTCAGATTTGTGGTCTCATGATGTCTCCAATGTGCATGCACAACAATCAGGTAACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

77

Amino Acids

8.6

Weight (kDa)

5.07

Isoelectric Point (pI)

62.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019776)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 49
AcsI RAATTY 1 cut(s) 69
AgsI TTSAA 1 cut(s) 68
AjnI CCWGG 1 cut(s) 155
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
Alw26I GTCTC 3 cut(s) 154, 192, 202
AoxI GGCC 1 cut(s) 44
ApoI RAATTY 1 cut(s) 69
AspLEI GCGC 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 41
BciT130I CCWGG 1 cut(s) 157
BciVI GTATCC 1 cut(s) 109
BcoDI GTCTC 3 cut(s) 154, 192, 202
BfoI RGCGCY 1 cut(s) 127
BfuAI ACCTGC 1 cut(s) 49
BfuI GTATCC 1 cut(s) 109
Bme1390I CCNGG 1 cut(s) 157
BmrFI CCNGG 1 cut(s) 157
BpmI CTGGAG 1 cut(s) 104
BpuEI CTTGAG 1 cut(s) 95
BsaI GGTCTC 2 cut(s) 154, 192
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
BseBI CCWGG 1 cut(s) 157
BseRI GAGGAG 1 cut(s) 107
BshFI GGCC 1 cut(s) 46
BsmAI GTCTC 3 cut(s) 154, 192, 202
BsnI GGCC 1 cut(s) 46
Bso31I GGTCTC 2 cut(s) 154, 192
BspANI GGCC 1 cut(s) 46
BspHI TCATGA 1 cut(s) 190
BspMI ACCTGC 1 cut(s) 49
BspTNI GGTCTC 2 cut(s) 154, 192
Bst2UI CCWGG 1 cut(s) 157
BstC8I GCNNGC 1 cut(s) 210
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BstMAI GTCTC 3 cut(s) 154, 192, 202
BstMWI GCNNNNNNNGC 1 cut(s) 121
BstNI CCWGG 1 cut(s) 157
BstNSI RCATGY 1 cut(s) 212
BstSCI CCNGG 1 cut(s) 155
BsuI GTATCC 1 cut(s) 109
BsuRI GGCC 1 cut(s) 46
BveI ACCTGC 1 cut(s) 49
Cac8I GCNNGC 1 cut(s) 210
CciI TCATGA 1 cut(s) 190
CfoI GCGC 1 cut(s) 126
CviAII CATG 2 cut(s) 191, 209
CviJI RGCY 2 cut(s) 46, 115
CviKI_1 RGCY 2 cut(s) 46, 115
Eco31I GGTCTC 2 cut(s) 154, 192
EcoRII CCWGG 1 cut(s) 155
FaeI CATG 2 cut(s) 194, 212
FaiI YATR 3 cut(s) 140, 192, 210
FatI CATG 2 cut(s) 190, 208
GlaI GCGC 1 cut(s) 125
GsuI CTGGAG 1 cut(s) 104
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 1 cut(s) 46
HhaI GCGC 1 cut(s) 126
Hin1II CATG 2 cut(s) 194, 212
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HphI GGTGA 1 cut(s) 41
Hpy188I TCNGA 1 cut(s) 178
Hpy188III TCNNGA 2 cut(s) 74, 191
HpyAV CCTTC 1 cut(s) 31
HpyCH4V TGCA 3 cut(s) 4, 208, 212
HpyF10VI GCNNNNNNNGC 1 cut(s) 121
Hsp92II CATG 2 cut(s) 194, 212
HspAI GCGC 1 cut(s) 124
LmnI GCTCC 1 cut(s) 120
LpnPI CCDG 7 cut(s) 12, 44, 134, 142, 169, 184, 207
MaeIII GTNAC 2 cut(s) 148, 224
MluCI AATT 1 cut(s) 69
MnlI CCTC 3 cut(s) 48, 70, 128
MspR9I CCNGG 1 cut(s) 157
MvaI CCWGG 1 cut(s) 157
MwoI GCNNNNNNNGC 1 cut(s) 121
NlaIII CATG 2 cut(s) 194, 212
NmuCI GTSAC 1 cut(s) 148
NspI RCATGY 1 cut(s) 212
PaeI GCATGC 1 cut(s) 212
PagI TCATGA 1 cut(s) 190
PfoI TCCNGGA 1 cut(s) 155
Psp6I CCWGG 1 cut(s) 155
PspGI CCWGG 1 cut(s) 155
ScrFI CCNGG 1 cut(s) 157
SetI ASST 5 cut(s) 31, 63, 117, 166, 226
SgeI CNNG 9 cut(s) 39, 71, 86, 133, 168, 169, 183, 203, 221
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
SphI GCATGC 1 cut(s) 212
Sse9I AATT 1 cut(s) 69
StyD4I CCNGG 1 cut(s) 155
TasI AATT 1 cut(s) 69
TseFI GTSAC 1 cut(s) 148
Tsp45I GTSAC 1 cut(s) 148
XapI RAATTY 1 cut(s) 69
XceI RCATGY 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.