RchiOBHm_Chr3g0485471

Inositol hexakisphosphate

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
32237496 .. 32238901
1406 bp
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UTR
Exon/CDS
Intron
PRQ45008

Sequence Viewer

Length: 165 bp
ATGTCTATTCCCAAGGAGCCGGACCAGGTAATGAAGCAGAGGGGAGGCTCTGTTCTCGGAAAGAAGACCATTCTCAAGAGTGACCACTTCCCTGGCTGCCAGAACAAACGCCTCTCCCCCACATTGACGGCGCTCCCAATTACCGTCAGCCTCGAGCACATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

54

Amino Acids

5.93

Weight (kDa)

9.74

Isoelectric Point (pI)

52.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021176)

Species Orthologous Gene IDs
malus_domestica MD01G1165100.v1.1
pyrus_communis pycom07g21020
rosa_chinensis RchiOBHm_Chr3g0485471
rosa_samantha Rh3AG267900 Rh3BG303400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AjnI CCWGG 2 cut(s) 24, 91
AloI GAACNNNNNNTCC 2 cut(s) 36, 68
Alw21I GWGCWC 1 cut(s) 159
Ama87I CYCGRG 1 cut(s) 152
ApeKI GCWGC 1 cut(s) 96
AspLEI GCGC 1 cut(s) 133
AspS9I GGNCC 1 cut(s) 22
AvaI CYCGRG 1 cut(s) 152
AvaII GGWCC 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 71
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 1 cut(s) 83
BceAI ACGGC 1 cut(s) 144
BciT130I CCWGG 2 cut(s) 26, 93
BfoI RGCGCY 1 cut(s) 134
BisI GCNGC 1 cut(s) 97
BlsI GCNGC 1 cut(s) 98
Bme1390I CCNGG 2 cut(s) 26, 93
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 1 cut(s) 152
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 1 cut(s) 18
BmrFI CCNGG 2 cut(s) 26, 93
BpiI GAAGAC 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 59
BsaJI CCNNGG 2 cut(s) 12, 91
BsaXI ACNNNNNCTCC 2 cut(s) 36, 66
BseBI CCWGG 2 cut(s) 26, 93
BseDI CCNNGG 2 cut(s) 12, 91
BseXI GCAGC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 159
BsiHKCI CYCGRG 1 cut(s) 152
BsiSI CCGG 1 cut(s) 20
BsoBI CYCGRG 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 18
BssECI CCNNGG 2 cut(s) 12, 91
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 2 cut(s) 26, 93
Bst4CI ACNGT 1 cut(s) 145
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstNI CCWGG 2 cut(s) 26, 93
BstSCI CCNGG 2 cut(s) 24, 91
BstV1I GCAGC 1 cut(s) 83
BstV2I GAAGAC 1 cut(s) 71
BstXI CCANNNNNNTGG 1 cut(s) 92
CfoI GCGC 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 22
CsiI ACCWGGT 1 cut(s) 24
CviJI RGCY 4 cut(s) 19, 48, 96, 150
CviKI_1 RGCY 4 cut(s) 19, 48, 96, 150
Eco130I CCWWGG 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 22
Eco88I CYCGRG 1 cut(s) 152
EcoRII CCWGG 2 cut(s) 24, 91
EcoT14I CCWWGG 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 12
FaiI YATR 2 cut(s) 161, 163
FauNDI CATATG 1 cut(s) 161
Fnu4HI GCNGC 1 cut(s) 97
Fsp4HI GCNGC 1 cut(s) 97
GlaI GCGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 97
HaeII RGCGCY 1 cut(s) 134
HapII CCGG 1 cut(s) 20
HhaI GCGC 1 cut(s) 133
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HpaII CCGG 1 cut(s) 20
Hpy188I TCNGA 1 cut(s) 59
Hpy188III TCNNGA 1 cut(s) 76
HpyCH4III ACNGT 1 cut(s) 145
HspAI GCGC 1 cut(s) 131
LmnI GCTCC 2 cut(s) 16, 138
LpnPI CCDG 6 cut(s) 11, 33, 38, 78, 105, 113
Lsp1109I GCAGC 1 cut(s) 83
MabI ACCWGGT 1 cut(s) 24
MaeIII GTNAC 1 cut(s) 80
MboII GAAGA 1 cut(s) 76
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 1 cut(s) 138
MnlI CCTC 4 cut(s) 33, 38, 122, 161
MspI CCGG 1 cut(s) 20
MspR9I CCNGG 2 cut(s) 26, 93
MvaI CCWGG 2 cut(s) 26, 93
NdeI CATATG 1 cut(s) 161
NlaIV GGNNCC 1 cut(s) 18
NmuCI GTSAC 1 cut(s) 80
PaeR7I CTCGAG 1 cut(s) 152
PkrI GCNGC 1 cut(s) 98
Psp6I CCWGG 2 cut(s) 24, 91
PspGI CCWGG 2 cut(s) 24, 91
PspN4I GGNNCC 1 cut(s) 18
PspPI GGNCC 1 cut(s) 22
PspXI VCTCGAGB 1 cut(s) 152
SatI GCNGC 1 cut(s) 97
Sau96I GGNCC 1 cut(s) 22
ScrFI CCNGG 2 cut(s) 26, 93
SduI GDGCHC 1 cut(s) 159
SetI ASST 1 cut(s) 30
SexAI ACCWGGT 1 cut(s) 24
Sfr274I CTCGAG 1 cut(s) 152
SgeI CNNG 9 cut(s) 25, 32, 37, 38, 68, 88, 104, 105, 112
SinI GGWCC 1 cut(s) 22
SlaI CTCGAG 1 cut(s) 152
SmlI CTYRAG 2 cut(s) 74, 152
SmoI CTYRAG 2 cut(s) 74, 152
Sse9I AATT 1 cut(s) 138
StyD4I CCNGG 2 cut(s) 24, 91
StyI CCWWGG 1 cut(s) 12
TaaI ACNGT 1 cut(s) 145
TaqI TCGA 1 cut(s) 153
TasI AATT 1 cut(s) 138
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 1 cut(s) 96
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 1 cut(s) 47
VpaK11BI GGWCC 1 cut(s) 22
XhoI CTCGAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.