Ninja-family protein AFP3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0395211 RchiOBHm_Chr4g0413541 |
| rosa_multiflora | Rmu_sc0001861.1_g000013 |
| rosa_samantha | Rh5BG127500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 244 |
| AclI | AACGTT | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 145 |
| AjnI | CCWGG | 1 cut(s) | 129 |
| AluBI | AGCT | 3 cut(s) | 124, 214, 222 |
| AluI | AGCT | 3 cut(s) | 124, 214, 222 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AoxI | GGCC | 1 cut(s) | 171 |
| ApeKI | GCWGC | 1 cut(s) | 214 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 163 |
| BbvI | GCAGC | 1 cut(s) | 201 |
| BccI | CCATC | 1 cut(s) | 202 |
| BciT130I | CCWGG | 1 cut(s) | 131 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BfmI | CTRYAG | 1 cut(s) | 215 |
| BisI | GCNGC | 1 cut(s) | 215 |
| BlpI | GCTNAGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 1 cut(s) | 216 |
| Bme1390I | CCNGG | 1 cut(s) | 131 |
| Bme18I | GGWCC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 2 cut(s) | 62, 165 |
| BmrFI | CCNGG | 1 cut(s) | 131 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 125 |
| BpuEI | CTTGAG | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 2 cut(s) | 130, 174 |
| Bse118I | RCCGGY | 1 cut(s) | 57 |
| BseBI | CCWGG | 1 cut(s) | 131 |
| BseDI | CCNNGG | 2 cut(s) | 130, 174 |
| BseGI | GGATG | 2 cut(s) | 196, 213 |
| BseMII | CTCAG | 1 cut(s) | 116 |
| BseRI | GAGGAG | 2 cut(s) | 30, 241 |
| BseXI | GCAGC | 1 cut(s) | 201 |
| Bsh1285I | CGRYCG | 1 cut(s) | 151 |
| BshFI | GGCC | 1 cut(s) | 173 |
| BsiEI | CGRYCG | 1 cut(s) | 151 |
| BsiSI | CCGG | 1 cut(s) | 58 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| BsnI | GGCC | 1 cut(s) | 173 |
| Bsp143I | GATC | 2 cut(s) | 86, 251 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 125 |
| BspACI | CCGC | 1 cut(s) | 244 |
| BspANI | GGCC | 1 cut(s) | 173 |
| BspCNI | CTCAG | 1 cut(s) | 117 |
| BspLI | GGNNCC | 2 cut(s) | 62, 165 |
| BspMAI | CTGCAG | 1 cut(s) | 219 |
| BsrFI | RCCGGY | 1 cut(s) | 57 |
| BssAI | RCCGGY | 1 cut(s) | 57 |
| BssECI | CCNNGG | 2 cut(s) | 130, 174 |
| BssMI | GATC | 2 cut(s) | 86, 251 |
| BssT1I | CCWWGG | 1 cut(s) | 174 |
| Bst2UI | CCWGG | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 2 cut(s) | 15, 149 |
| Bst6I | CTCTTC | 1 cut(s) | 197 |
| BstDEI | CTNAG | 1 cut(s) | 125 |
| BstF5I | GGATG | 2 cut(s) | 196, 213 |
| BstKTI | GATC | 2 cut(s) | 89, 254 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 2 cut(s) | 86, 251 |
| BstMCI | CGRYCG | 1 cut(s) | 151 |
| BstNI | CCWGG | 1 cut(s) | 131 |
| BstSCI | CCNGG | 1 cut(s) | 129 |
| BstSFI | CTRYAG | 1 cut(s) | 215 |
| BstV1I | GCAGC | 1 cut(s) | 201 |
| BsuRI | GGCC | 1 cut(s) | 173 |
| BtsCI | GGATG | 2 cut(s) | 196, 213 |
| Cfr10I | RCCGGY | 1 cut(s) | 57 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CviJI | RGCY | 7 cut(s) | 61, 124, 129, 136, 173, 214, 222 |
| CviKI_1 | RGCY | 7 cut(s) | 61, 124, 129, 136, 173, 214, 222 |
| DdeI | CTNAG | 1 cut(s) | 125 |
| DpnI | GATC | 2 cut(s) | 88, 253 |
| DpnII | GATC | 2 cut(s) | 86, 251 |
| Eam1104I | CTCTTC | 1 cut(s) | 197 |
| EarI | CTCTTC | 1 cut(s) | 197 |
| Eco130I | CCWWGG | 1 cut(s) | 174 |
| Eco47I | GGWCC | 1 cut(s) | 163 |
| EcoRII | CCWGG | 1 cut(s) | 129 |
| EcoT14I | CCWWGG | 1 cut(s) | 174 |
| ErhI | CCWWGG | 1 cut(s) | 174 |
| FaiI | YATR | 1 cut(s) | 18 |
| Fnu4HI | GCNGC | 1 cut(s) | 215 |
| FokI | GGATG | 2 cut(s) | 203, 220 |
| Fsp4HI | GCNGC | 1 cut(s) | 215 |
| FspBI | CTAG | 1 cut(s) | 98 |
| GluI | GCNGC | 1 cut(s) | 215 |
| HaeIII | GGCC | 1 cut(s) | 173 |
| HapII | CCGG | 1 cut(s) | 58 |
| HpaII | CCGG | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 163 |
| HpyCH4III | ACNGT | 2 cut(s) | 15, 149 |
| HpyCH4IV | ACGT | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 217 |
| HpyF3I | CTNAG | 1 cut(s) | 125 |
| HpySE526I | ACGT | 1 cut(s) | 117 |
| Kzo9I | GATC | 2 cut(s) | 86, 251 |
| LmnI | GCTCC | 2 cut(s) | 66, 211 |
| LpnPI | CCDG | 3 cut(s) | 71, 116, 143 |
| Lsp1109I | GCAGC | 1 cut(s) | 201 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MaeII | ACGT | 1 cut(s) | 117 |
| MalI | GATC | 2 cut(s) | 88, 253 |
| MboI | GATC | 2 cut(s) | 86, 251 |
| MboII | GAAGA | 1 cut(s) | 214 |
| MnlI | CCTC | 9 cut(s) | 44, 51, 75, 105, 181, 192, 198, 219, 229 |
| MseI | TTAA | 1 cut(s) | 6 |
| MspI | CCGG | 1 cut(s) | 58 |
| MspR9I | CCNGG | 1 cut(s) | 131 |
| MvaI | CCWGG | 1 cut(s) | 131 |
| NdeII | GATC | 2 cut(s) | 86, 251 |
| NlaIV | GGNNCC | 2 cut(s) | 62, 165 |
| PkrI | GCNGC | 1 cut(s) | 216 |
| Psp1406I | AACGTT | 1 cut(s) | 117 |
| Psp6I | CCWGG | 1 cut(s) | 129 |
| PspGI | CCWGG | 1 cut(s) | 129 |
| PspN4I | GGNNCC | 2 cut(s) | 62, 165 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| PstI | CTGCAG | 1 cut(s) | 219 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| SatI | GCNGC | 1 cut(s) | 215 |
| Sau3AI | GATC | 2 cut(s) | 86, 251 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 1 cut(s) | 131 |
| SetI | ASST | 6 cut(s) | 97, 120, 126, 180, 216, 224 |
| SfcI | CTRYAG | 1 cut(s) | 215 |
| SinI | GGWCC | 1 cut(s) | 163 |
| SmlI | CTYRAG | 1 cut(s) | 223 |
| SmoI | CTYRAG | 1 cut(s) | 223 |
| SsiI | CCGC | 1 cut(s) | 244 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyD4I | CCNGG | 1 cut(s) | 129 |
| StyI | CCWWGG | 1 cut(s) | 174 |
| TaaI | ACNGT | 2 cut(s) | 15, 149 |
| TaiI | ACGT | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 111 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TseI | GCWGC | 1 cut(s) | 214 |
| VpaK11BI | GGWCC | 1 cut(s) | 163 |
| XspI | CTAG | 1 cut(s) | 98 |