Ninja-family protein AFP3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0395211 RchiOBHm_Chr4g0413541 |
| rosa_multiflora | Rmu_sc0001861.1_g000013 |
| rosa_samantha | Rh5BG127500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 88, 189, 192, 218, 236 |
| AclWI | GGATC | 1 cut(s) | 227 |
| AcsI | RAATTY | 1 cut(s) | 151 |
| AfaI | GTAC | 1 cut(s) | 229 |
| AluBI | AGCT | 3 cut(s) | 58, 66, 127 |
| AluI | AGCT | 3 cut(s) | 58, 66, 127 |
| AlwI | GGATC | 1 cut(s) | 227 |
| AoxI | GGCC | 2 cut(s) | 136, 177 |
| ApeKI | GCWGC | 3 cut(s) | 58, 106, 127 |
| ApoI | RAATTY | 1 cut(s) | 151 |
| AspS9I | GGNCC | 1 cut(s) | 136 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| AsuII | TTCGAA | 1 cut(s) | 122 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| BbvI | GCAGC | 3 cut(s) | 45, 114, 118 |
| BccI | CCATC | 1 cut(s) | 188 |
| BfmI | CTRYAG | 1 cut(s) | 59 |
| BisI | GCNGC | 5 cut(s) | 59, 107, 128, 190, 219 |
| BlsI | GCNGC | 5 cut(s) | 60, 108, 129, 191, 220 |
| BmgT120I | GGNCC | 1 cut(s) | 136 |
| BmiI | GGNNCC | 2 cut(s) | 137, 143 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| Bpu14I | TTCGAA | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 1 cut(s) | 88 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseRI | GAGGAG | 2 cut(s) | 85, 192 |
| BseXI | GCAGC | 3 cut(s) | 45, 114, 118 |
| BshFI | GGCC | 2 cut(s) | 138, 179 |
| BsiSI | CCGG | 1 cut(s) | 139 |
| BsnI | GGCC | 2 cut(s) | 138, 179 |
| Bsp119I | TTCGAA | 1 cut(s) | 122 |
| Bsp143I | GATC | 2 cut(s) | 95, 232 |
| BspACI | CCGC | 5 cut(s) | 88, 189, 192, 218, 236 |
| BspANI | GGCC | 2 cut(s) | 138, 179 |
| BspLI | GGNNCC | 2 cut(s) | 137, 143 |
| BspMAI | CTGCAG | 1 cut(s) | 63 |
| BspPI | GGATC | 1 cut(s) | 227 |
| BspT104I | TTCGAA | 1 cut(s) | 122 |
| BssMI | GATC | 2 cut(s) | 95, 232 |
| Bst6I | CTCTTC | 2 cut(s) | 107, 210 |
| BstBI | TTCGAA | 1 cut(s) | 122 |
| BstC8I | GCNNGC | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstKTI | GATC | 2 cut(s) | 98, 235 |
| BstMBI | GATC | 2 cut(s) | 95, 232 |
| BstSFI | CTRYAG | 1 cut(s) | 59 |
| BstV1I | GCAGC | 3 cut(s) | 45, 114, 118 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| BstX2I | RGATCY | 1 cut(s) | 232 |
| BstYI | RGATCY | 1 cut(s) | 232 |
| BsuRI | GGCC | 2 cut(s) | 138, 179 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| Cac8I | GCNNGC | 1 cut(s) | 14 |
| Cfr13I | GGNCC | 1 cut(s) | 136 |
| Csp6I | GTAC | 1 cut(s) | 228 |
| CviAII | CATG | 1 cut(s) | 240 |
| CviJI | RGCY | 6 cut(s) | 58, 66, 127, 138, 144, 179 |
| CviKI_1 | RGCY | 6 cut(s) | 58, 66, 127, 138, 144, 179 |
| CviQI | GTAC | 1 cut(s) | 228 |
| DpnI | GATC | 2 cut(s) | 97, 234 |
| DpnII | GATC | 2 cut(s) | 95, 232 |
| Eam1104I | CTCTTC | 2 cut(s) | 107, 210 |
| EarI | CTCTTC | 2 cut(s) | 107, 210 |
| EciI | GGCGGA | 1 cut(s) | 225 |
| FaeI | CATG | 1 cut(s) | 243 |
| FaiI | YATR | 2 cut(s) | 132, 241 |
| FatI | CATG | 1 cut(s) | 239 |
| Fnu4HI | GCNGC | 5 cut(s) | 59, 107, 128, 190, 219 |
| FokI | GGATG | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 5 cut(s) | 59, 107, 128, 190, 219 |
| GluI | GCNGC | 5 cut(s) | 59, 107, 128, 190, 219 |
| HaeIII | GGCC | 2 cut(s) | 138, 179 |
| HapII | CCGG | 1 cut(s) | 139 |
| Hin1II | CATG | 1 cut(s) | 243 |
| HinfI | GANTC | 1 cut(s) | 211 |
| HpaII | CCGG | 1 cut(s) | 139 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 210 |
| HpyCH4V | TGCA | 2 cut(s) | 61, 130 |
| Hsp92II | CATG | 1 cut(s) | 243 |
| Kzo9I | GATC | 2 cut(s) | 95, 232 |
| LmnI | GCTCC | 1 cut(s) | 141 |
| LpnPI | CCDG | 2 cut(s) | 152, 228 |
| Lsp1109I | GCAGC | 3 cut(s) | 45, 114, 118 |
| MalI | GATC | 2 cut(s) | 97, 234 |
| MboI | GATC | 2 cut(s) | 95, 232 |
| MboII | GAAGA | 3 cut(s) | 37, 124, 197 |
| MflI | RGATCY | 1 cut(s) | 232 |
| MluCI | AATT | 1 cut(s) | 151 |
| MnlI | CCTC | 7 cut(s) | 25, 36, 63, 73, 169, 210, 213 |
| MspA1I | CMGCKG | 1 cut(s) | 218 |
| MspI | CCGG | 1 cut(s) | 139 |
| NdeII | GATC | 2 cut(s) | 95, 232 |
| NlaIII | CATG | 1 cut(s) | 243 |
| NlaIV | GGNNCC | 2 cut(s) | 137, 143 |
| NmeAIII | GCCGAG | 1 cut(s) | 170 |
| NspV | TTCGAA | 1 cut(s) | 122 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 20 |
| PfeI | GAWTC | 1 cut(s) | 211 |
| PkrI | GCNGC | 5 cut(s) | 60, 108, 129, 191, 220 |
| PspN4I | GGNNCC | 2 cut(s) | 137, 143 |
| PspPI | GGNCC | 1 cut(s) | 136 |
| PstI | CTGCAG | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 232 |
| RsaI | GTAC | 1 cut(s) | 229 |
| RsaNI | GTAC | 1 cut(s) | 228 |
| SatI | GCNGC | 5 cut(s) | 59, 107, 128, 190, 219 |
| Sau3AI | GATC | 2 cut(s) | 95, 232 |
| Sau96I | GGNCC | 1 cut(s) | 136 |
| SetI | ASST | 4 cut(s) | 60, 68, 84, 129 |
| SfcI | CTRYAG | 1 cut(s) | 59 |
| SfuI | TTCGAA | 1 cut(s) | 122 |
| SgeI | CNNG | 8 cut(s) | 21, 25, 34, 79, 151, 158, 182, 227 |
| SmlI | CTYRAG | 1 cut(s) | 67 |
| SmoI | CTYRAG | 1 cut(s) | 67 |
| Sse9I | AATT | 1 cut(s) | 151 |
| SsiI | CCGC | 5 cut(s) | 88, 189, 192, 218, 236 |
| TaqI | TCGA | 1 cut(s) | 122 |
| TasI | AATT | 1 cut(s) | 151 |
| TauI | GCSGC | 2 cut(s) | 192, 221 |
| TfiI | GAWTC | 1 cut(s) | 211 |
| TseI | GCWGC | 3 cut(s) | 58, 106, 127 |
| TspGWI | ACGGA | 1 cut(s) | 215 |
| XapI | RAATTY | 1 cut(s) | 151 |