Ninja-family protein AFP3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0395211 RchiOBHm_Chr4g0413541 |
| rosa_multiflora | Rmu_sc0001861.1_g000013 |
| rosa_samantha | Rh5BG127500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 6 cut(s) | 128, 193, 294, 297, 323, 341 |
| AclWI | GGATC | 1 cut(s) | 332 |
| AcsI | RAATTY | 1 cut(s) | 256 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 250 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AluBI | AGCT | 4 cut(s) | 73, 163, 171, 232 |
| AluI | AGCT | 4 cut(s) | 73, 163, 171, 232 |
| Alw26I | GTCTC | 1 cut(s) | 125 |
| AlwI | GGATC | 1 cut(s) | 332 |
| AoxI | GGCC | 3 cut(s) | 120, 241, 282 |
| ApeKI | GCWGC | 3 cut(s) | 163, 211, 232 |
| ApoI | RAATTY | 1 cut(s) | 256 |
| AspS9I | GGNCC | 2 cut(s) | 112, 241 |
| AsuC2I | CCSGG | 1 cut(s) | 251 |
| AsuII | TTCGAA | 1 cut(s) | 227 |
| AvaII | GGWCC | 1 cut(s) | 112 |
| BbvI | GCAGC | 3 cut(s) | 150, 219, 223 |
| BccI | CCATC | 1 cut(s) | 293 |
| BcnI | CCSGG | 1 cut(s) | 251 |
| BcoDI | GTCTC | 1 cut(s) | 125 |
| BfmI | CTRYAG | 1 cut(s) | 164 |
| BisI | GCNGC | 5 cut(s) | 164, 212, 233, 295, 324 |
| BlsI | GCNGC | 5 cut(s) | 165, 213, 234, 296, 325 |
| Bme1390I | CCNGG | 1 cut(s) | 251 |
| Bme18I | GGWCC | 1 cut(s) | 112 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 241 |
| BmiI | GGNNCC | 3 cut(s) | 114, 242, 248 |
| BmrFI | CCNGG | 1 cut(s) | 251 |
| Bpu14I | TTCGAA | 1 cut(s) | 227 |
| BpuEI | CTTGAG | 1 cut(s) | 193 |
| BpuMI | CCSGG | 1 cut(s) | 251 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 250 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 145 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 250 |
| BseMII | CTCAG | 1 cut(s) | 65 |
| BseRI | GAGGAG | 2 cut(s) | 190, 297 |
| BseXI | GCAGC | 3 cut(s) | 150, 219, 223 |
| Bsh1285I | CGRYCG | 2 cut(s) | 100, 203 |
| BshFI | GGCC | 3 cut(s) | 122, 243, 284 |
| BsiEI | CGRYCG | 2 cut(s) | 100, 203 |
| BsiSI | CCGG | 3 cut(s) | 244, 250, 320 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 250 |
| BsmAI | GTCTC | 1 cut(s) | 125 |
| BsnI | GGCC | 3 cut(s) | 122, 243, 284 |
| Bsp119I | TTCGAA | 1 cut(s) | 227 |
| Bsp143I | GATC | 3 cut(s) | 97, 200, 337 |
| BspACI | CCGC | 6 cut(s) | 128, 193, 294, 297, 323, 341 |
| BspANI | GGCC | 3 cut(s) | 122, 243, 284 |
| BspCNI | CTCAG | 1 cut(s) | 66 |
| BspLI | GGNNCC | 3 cut(s) | 114, 242, 248 |
| BspMAI | CTGCAG | 1 cut(s) | 168 |
| BspPI | GGATC | 1 cut(s) | 332 |
| BspT104I | TTCGAA | 1 cut(s) | 227 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 3 cut(s) | 97, 200, 337 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| Bst6I | CTCTTC | 3 cut(s) | 146, 212, 315 |
| BstBI | TTCGAA | 1 cut(s) | 227 |
| BstDEI | CTNAG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 145 |
| BstKTI | GATC | 3 cut(s) | 100, 203, 340 |
| BstMAI | GTCTC | 1 cut(s) | 125 |
| BstMBI | GATC | 3 cut(s) | 97, 200, 337 |
| BstMCI | CGRYCG | 2 cut(s) | 100, 203 |
| BstSCI | CCNGG | 1 cut(s) | 249 |
| BstSFI | CTRYAG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 3 cut(s) | 150, 219, 223 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BsuRI | GGCC | 3 cut(s) | 122, 243, 284 |
| BtsCI | GGATG | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 241 |
| CviAII | CATG | 1 cut(s) | 345 |
| DdeI | CTNAG | 1 cut(s) | 74 |
| DpnI | GATC | 3 cut(s) | 99, 202, 339 |
| DpnII | GATC | 3 cut(s) | 97, 200, 337 |
| Eam1104I | CTCTTC | 3 cut(s) | 146, 212, 315 |
| EarI | CTCTTC | 3 cut(s) | 146, 212, 315 |
| EciI | GGCGGA | 2 cut(s) | 143, 330 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| Eco47I | GGWCC | 1 cut(s) | 112 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| FaeI | CATG | 1 cut(s) | 348 |
| FaiI | YATR | 5 cut(s) | 12, 237, 333, 335, 346 |
| FatI | CATG | 1 cut(s) | 344 |
| Fnu4HI | GCNGC | 5 cut(s) | 164, 212, 233, 295, 324 |
| FokI | GGATG | 1 cut(s) | 152 |
| Fsp4HI | GCNGC | 5 cut(s) | 164, 212, 233, 295, 324 |
| GluI | GCNGC | 5 cut(s) | 164, 212, 233, 295, 324 |
| HaeIII | GGCC | 3 cut(s) | 122, 243, 284 |
| HapII | CCGG | 3 cut(s) | 244, 250, 320 |
| Hin1II | CATG | 1 cut(s) | 348 |
| HinfI | GANTC | 2 cut(s) | 76, 316 |
| HpaII | CCGG | 3 cut(s) | 244, 250, 320 |
| Hpy166II | GTNNAC | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 315 |
| Hpy8I | GTNNAC | 1 cut(s) | 112 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 68 |
| HpyAV | CCTTC | 2 cut(s) | 112, 151 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 166, 235 |
| HpyF3I | CTNAG | 1 cut(s) | 74 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 348 |
| Kzo9I | GATC | 3 cut(s) | 97, 200, 337 |
| LmnI | GCTCC | 2 cut(s) | 160, 246 |
| LpnPI | CCDG | 5 cut(s) | 33, 65, 257, 263, 333 |
| Lsp1109I | GCAGC | 3 cut(s) | 150, 219, 223 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MaeIII | GTNAC | 1 cut(s) | 3 |
| MalI | GATC | 3 cut(s) | 99, 202, 339 |
| MboI | GATC | 3 cut(s) | 97, 200, 337 |
| MboII | GAAGA | 4 cut(s) | 163, 229, 278, 302 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MluCI | AATT | 1 cut(s) | 256 |
| MlyI | GAGTC | 2 cut(s) | 85, 325 |
| MnlI | CCTC | 9 cut(s) | 130, 141, 147, 168, 178, 256, 274, 315, 318 |
| MspI | CCGG | 3 cut(s) | 244, 250, 320 |
| MspR9I | CCNGG | 1 cut(s) | 251 |
| NciI | CCSGG | 1 cut(s) | 251 |
| NdeII | GATC | 3 cut(s) | 97, 200, 337 |
| NlaIII | CATG | 1 cut(s) | 348 |
| NlaIV | GGNNCC | 3 cut(s) | 114, 242, 248 |
| NmuCI | GTSAC | 1 cut(s) | 3 |
| NspV | TTCGAA | 1 cut(s) | 227 |
| PkrI | GCNGC | 5 cut(s) | 165, 213, 234, 296, 325 |
| Ple19I | CGATCG | 2 cut(s) | 100, 203 |
| PleI | GAGTC | 2 cut(s) | 84, 324 |
| PpsI | GAGTC | 2 cut(s) | 84, 324 |
| PspN4I | GGNNCC | 3 cut(s) | 114, 242, 248 |
| PspPI | GGNCC | 2 cut(s) | 112, 241 |
| PstI | CTGCAG | 1 cut(s) | 168 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| PvuI | CGATCG | 2 cut(s) | 100, 203 |
| SatI | GCNGC | 5 cut(s) | 164, 212, 233, 295, 324 |
| Sau3AI | GATC | 3 cut(s) | 97, 200, 337 |
| Sau96I | GGNCC | 2 cut(s) | 112, 241 |
| SchI | GAGTC | 2 cut(s) | 85, 325 |
| ScrFI | CCNGG | 1 cut(s) | 251 |
| SetI | ASST | 5 cut(s) | 69, 75, 165, 173, 234 |
| SfcI | CTRYAG | 1 cut(s) | 164 |
| SfuI | TTCGAA | 1 cut(s) | 227 |
| SinI | GGWCC | 1 cut(s) | 112 |
| SmlI | CTYRAG | 1 cut(s) | 172 |
| SmoI | CTYRAG | 1 cut(s) | 172 |
| Sse9I | AATT | 1 cut(s) | 256 |
| SsiI | CCGC | 6 cut(s) | 128, 193, 294, 297, 323, 341 |
| StyD4I | CCNGG | 1 cut(s) | 249 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TaqI | TCGA | 3 cut(s) | 60, 227, 261 |
| TasI | AATT | 1 cut(s) | 256 |
| TauI | GCSGC | 2 cut(s) | 297, 326 |
| TseFI | GTSAC | 1 cut(s) | 3 |
| TseI | GCWGC | 3 cut(s) | 163, 211, 232 |
| Tsp45I | GTSAC | 1 cut(s) | 3 |
| VpaK11BI | GGWCC | 1 cut(s) | 112 |
| XapI | RAATTY | 1 cut(s) | 256 |