RchiOBHm_Chr4g0426861
NAC Family

Inactive serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
52209168 .. 52209775
608 bp
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UTR
Exon/CDS
Intron
PRQ39584

Sequence Viewer

Length: 180 bp
ATGGCGCACCAAATGTGCTTCGACTGCCTCCAGCGCCGGATTGAGTCGGAGTTCTCCGGCAAACTGGTCTTCATCCACGGACTCTCCGATTCCGCTTTCCCGTTCGGCTCAAACGCCGTCGTTCAGGTCCAAGTTCAATTCTTTACCCCTCTCTCTCTCTCATCCCTGTGCATTAAGTAG

Protein Analysis

59

Amino Acids

6.6

Weight (kDa)

6.69

Isoelectric Point (pI)

50.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021402)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0426861 RchiOBHm_Chr6g0275911
rosa_laevigata RLG00000008597
rosa_samantha Rh4CG161800 Rh7DG282900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 93
AgsI TTSAA 1 cut(s) 137
AspLEI GCGC 2 cut(s) 7, 36
AspS9I GGNCC 1 cut(s) 127
AvaII GGWCC 1 cut(s) 127
BbsI GAAGAC 1 cut(s) 61
BceAI ACGGC 1 cut(s) 101
BfoI RGCGCY 1 cut(s) 37
Bme18I GGWCC 1 cut(s) 127
BmgT120I GGNCC 1 cut(s) 127
BpiI GAAGAC 1 cut(s) 61
BpmI CTGGAG 1 cut(s) 14
BsaJI CCNNGG 1 cut(s) 76
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bse1I ACTGG 1 cut(s) 69
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 2 cut(s) 72, 161
BseNI ACTGG 1 cut(s) 69
BsiSI CCGG 2 cut(s) 37, 57
BspACI CCGC 1 cut(s) 93
BsrI ACTGG 1 cut(s) 69
BssECI CCNNGG 1 cut(s) 76
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 2 cut(s) 72, 161
BstH2I RGCGCY 1 cut(s) 37
BstHHI GCGC 2 cut(s) 7, 36
BstMWI GCNNNNNNNGC 2 cut(s) 24, 33
BstV2I GAAGAC 1 cut(s) 61
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 2 cut(s) 72, 161
CfoI GCGC 2 cut(s) 7, 36
Cfr13I GGNCC 1 cut(s) 127
CviJI RGCY 1 cut(s) 108
CviKI_1 RGCY 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 127
FokI GGATG 2 cut(s) 59, 148
GlaI GCGC 2 cut(s) 6, 35
GsuI CTGGAG 1 cut(s) 14
HaeII RGCGCY 1 cut(s) 37
HapII CCGG 2 cut(s) 37, 57
HhaI GCGC 2 cut(s) 7, 36
Hin6I GCGC 2 cut(s) 5, 34
HinP1I GCGC 2 cut(s) 5, 34
HinfI GANTC 3 cut(s) 44, 81, 89
HpaII CCGG 2 cut(s) 37, 57
Hpy188I TCNGA 2 cut(s) 49, 88
Hpy99I CGWCG 1 cut(s) 122
HpyCH4V TGCA 1 cut(s) 171
HpyF10VI GCNNNNNNNGC 2 cut(s) 24, 33
HspAI GCGC 2 cut(s) 5, 34
LpnPI CCDG 5 cut(s) 44, 50, 50, 70, 110
MboII GAAGA 1 cut(s) 61
MluCI AATT 1 cut(s) 137
MlyI GAGTC 2 cut(s) 53, 75
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 2 cut(s) 38, 159
MseI TTAA 1 cut(s) 174
MslI CAYNNNNRTG 1 cut(s) 166
MspI CCGG 2 cut(s) 37, 57
MwoI GCNNNNNNNGC 2 cut(s) 24, 33
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PfeI GAWTC 1 cut(s) 89
PleI GAGTC 2 cut(s) 52, 75
PpsI GAGTC 2 cut(s) 52, 75
PspPI GGNCC 1 cut(s) 127
RseI CAYNNNNRTG 1 cut(s) 166
SaqAI TTAA 1 cut(s) 174
Sau96I GGNCC 1 cut(s) 127
SchI GAGTC 2 cut(s) 53, 75
SetI ASST 1 cut(s) 129
SgeI CNNG 8 cut(s) 43, 49, 69, 77, 89, 112, 137, 143
SinI GGWCC 1 cut(s) 127
SmiMI CAYNNNNRTG 1 cut(s) 166
Sse9I AATT 1 cut(s) 137
SsiI CCGC 1 cut(s) 93
TaqI TCGA 1 cut(s) 21
TasI AATT 1 cut(s) 137
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TspDTI ATGAA 1 cut(s) 61
TspGWI ACGGA 1 cut(s) 93
VpaK11BI GGWCC 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.