RchiOBHm_Chr6g0275911
NAC Family

Inactive serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
37870830 .. 37871997
1168 bp
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UTR
Exon/CDS
Intron
PRQ24753

Sequence Viewer

Length: 174 bp
ATGGCGCATCAAATGTGCCGCGACTGCCCCCAGCGCCGGATTGAGTCGGAGTTCTCCGGCAAACTCGTCTTCATCCACGGACTTTCCGATTCCGCTTTTTCATTTGGCCCAATTGTCATCGTTCATGTCCAAGTTCAATTCTCTACCCCTCTCTCTTTCATCCCTGTGCGTTAA

Protein Analysis

57

Amino Acids

6.45

Weight (kDa)

7.89

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021402)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0426861 RchiOBHm_Chr6g0275911
rosa_laevigata RLG00000008597
rosa_samantha Rh4CG161800 Rh7DG282900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 21
AciI CCGC 2 cut(s) 19, 93
AfiI CCNNNNNNNGG 1 cut(s) 36
AgsI TTSAA 1 cut(s) 137
AoxI GGCC 1 cut(s) 106
AspLEI GCGC 2 cut(s) 7, 36
AspS9I GGNCC 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 61
BfoI RGCGCY 1 cut(s) 37
BisI GCNGC 1 cut(s) 19
BlsI GCNGC 1 cut(s) 20
BmgT120I GGNCC 1 cut(s) 107
BmsI GCATC 1 cut(s) 16
BpiI GAAGAC 1 cut(s) 61
BsaJI CCNNGG 1 cut(s) 76
Bsc4I CCNNNNNNNGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 2 cut(s) 72, 159
BseLI CCNNNNNNNGG 1 cut(s) 36
BseYI CCCAGC 1 cut(s) 30
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 2 cut(s) 37, 57
BslI CCNNNNNNNGG 1 cut(s) 36
BsnI GGCC 1 cut(s) 108
BspACI CCGC 2 cut(s) 19, 93
BspANI GGCC 1 cut(s) 108
BspFNI CGCG 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 76
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 2 cut(s) 72, 159
BstFNI CGCG 1 cut(s) 21
BstH2I RGCGCY 1 cut(s) 37
BstHHI GCGC 2 cut(s) 7, 36
BstMWI GCNNNNNNNGC 2 cut(s) 24, 33
BstUI CGCG 1 cut(s) 21
BstV2I GAAGAC 1 cut(s) 61
BsuRI GGCC 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 2 cut(s) 72, 159
CfoI GCGC 2 cut(s) 7, 36
Cfr13I GGNCC 1 cut(s) 107
CviAII CATG 1 cut(s) 125
CviJI RGCY 1 cut(s) 108
CviKI_1 RGCY 1 cut(s) 108
FaeI CATG 1 cut(s) 128
FaiI YATR 1 cut(s) 126
FatI CATG 1 cut(s) 124
Fnu4HI GCNGC 1 cut(s) 19
FokI GGATG 2 cut(s) 59, 146
Fsp4HI GCNGC 1 cut(s) 19
GlaI GCGC 2 cut(s) 6, 35
GluI GCNGC 1 cut(s) 19
GsaI CCCAGC 1 cut(s) 34
HaeII RGCGCY 1 cut(s) 37
HaeIII GGCC 1 cut(s) 108
HapII CCGG 2 cut(s) 37, 57
HhaI GCGC 2 cut(s) 7, 36
Hin1II CATG 1 cut(s) 128
Hin6I GCGC 2 cut(s) 5, 34
HinP1I GCGC 2 cut(s) 5, 34
HinfI GANTC 2 cut(s) 44, 89
HpaII CCGG 2 cut(s) 37, 57
Hpy188I TCNGA 2 cut(s) 49, 88
HpyF10VI GCNNNNNNNGC 2 cut(s) 24, 33
Hsp92II CATG 1 cut(s) 128
HspAI GCGC 2 cut(s) 5, 34
LpnPI CCDG 3 cut(s) 44, 50, 70
LweI GCATC 1 cut(s) 16
MboII GAAGA 1 cut(s) 61
MfeI CAATTG 1 cut(s) 111
MluCI AATT 2 cut(s) 111, 137
MlyI GAGTC 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 1 cut(s) 159
MseI TTAA 1 cut(s) 172
MslI CAYNNNNRTG 1 cut(s) 164
MspI CCGG 2 cut(s) 37, 57
MunI CAATTG 1 cut(s) 111
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 2 cut(s) 24, 33
NlaIII CATG 1 cut(s) 128
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PfeI GAWTC 1 cut(s) 89
PkrI GCNGC 1 cut(s) 20
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
PspFI CCCAGC 1 cut(s) 30
PspPI GGNCC 1 cut(s) 107
RseI CAYNNNNRTG 1 cut(s) 164
SaqAI TTAA 1 cut(s) 172
SatI GCNGC 1 cut(s) 19
Sau96I GGNCC 1 cut(s) 107
SchI GAGTC 1 cut(s) 53
SfaNI GCATC 1 cut(s) 16
SgeI CNNG 8 cut(s) 32, 43, 49, 69, 77, 89, 137, 143
SmiMI CAYNNNNRTG 1 cut(s) 164
Sse9I AATT 2 cut(s) 111, 137
SsiI CCGC 2 cut(s) 19, 93
TasI AATT 2 cut(s) 111, 137
TauI GCSGC 1 cut(s) 21
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 172
Tru9I TTAA 1 cut(s) 172
TspDTI ATGAA 4 cut(s) 61, 90, 113, 148
TspGWI ACGGA 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.