U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0431701 |
| rosa_laevigata | RLG00000008095 |
| rosa_roxburghii | Rroxscaffold_1G00025470 Rroxscaffold_5G00342860 |
| rosa_samantha | Rh1BG238100 Rh1DG266200 Rh5CG426600 Rh6CG103700 Rh6DG094600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 403 |
| AciI | CCGC | 1 cut(s) | 403 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 357 |
| AgsI | TTSAA | 2 cut(s) | 177, 286 |
| AluBI | AGCT | 1 cut(s) | 320 |
| AluI | AGCT | 1 cut(s) | 320 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| Alw26I | GTCTC | 2 cut(s) | 53, 262 |
| Alw44I | GTGCAC | 1 cut(s) | 210 |
| ApaLI | GTGCAC | 1 cut(s) | 210 |
| BaeGI | GKGCMC | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BcoDI | GTCTC | 2 cut(s) | 53, 262 |
| BfaI | CTAG | 2 cut(s) | 152, 164 |
| BfmI | CTRYAG | 1 cut(s) | 29 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 64 |
| BmsI | GCATC | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 240, 270 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 357 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 357 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseSI | GKGCMC | 1 cut(s) | 214 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 128 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 357 |
| BsmAI | GTCTC | 2 cut(s) | 53, 262 |
| BsmFI | GGGAC | 1 cut(s) | 128 |
| BsmI | GAATGC | 1 cut(s) | 159 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| BspACI | CCGC | 1 cut(s) | 403 |
| BsrBI | CCGCTC | 1 cut(s) | 403 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 2 cut(s) | 47, 198 |
| BstMAI | GTCTC | 2 cut(s) | 53, 262 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 64 |
| BstSFI | CTRYAG | 1 cut(s) | 29 |
| BstSLI | GKGCMC | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 235 |
| CviAII | CATG | 3 cut(s) | 88, 201, 232 |
| CviJI | RGCY | 3 cut(s) | 58, 320, 368 |
| CviKI_1 | RGCY | 3 cut(s) | 58, 320, 368 |
| FaeI | CATG | 3 cut(s) | 91, 204, 235 |
| FaiI | YATR | 4 cut(s) | 89, 202, 233, 371 |
| FaqI | GGGAC | 1 cut(s) | 128 |
| FatI | CATG | 3 cut(s) | 87, 200, 231 |
| FspBI | CTAG | 2 cut(s) | 152, 164 |
| Hin1II | CATG | 3 cut(s) | 91, 204, 235 |
| HinfI | GANTC | 2 cut(s) | 167, 173 |
| Hpy166II | GTNNAC | 2 cut(s) | 212, 274 |
| Hpy188I | TCNGA | 4 cut(s) | 136, 172, 298, 313 |
| Hpy188III | TCNNGA | 3 cut(s) | 50, 164, 283 |
| Hpy8I | GTNNAC | 2 cut(s) | 212, 274 |
| HpyAV | CCTTC | 1 cut(s) | 358 |
| HpyCH4III | ACNGT | 2 cut(s) | 47, 198 |
| HpyCH4V | TGCA | 5 cut(s) | 77, 107, 212, 245, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 64 |
| Hsp92II | CATG | 3 cut(s) | 91, 204, 235 |
| LpnPI | CCDG | 1 cut(s) | 231 |
| LweI | GCATC | 1 cut(s) | 76 |
| MaeI | CTAG | 2 cut(s) | 152, 164 |
| MaeIII | GTNAC | 1 cut(s) | 346 |
| MbiI | CCGCTC | 1 cut(s) | 403 |
| MboII | GAAGA | 4 cut(s) | 10, 90, 373, 386 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 3 cut(s) | 71, 138, 287 |
| MlyI | GAGTC | 1 cut(s) | 176 |
| MmeI | TCCRAC | 1 cut(s) | 216 |
| MnlI | CCTC | 3 cut(s) | 132, 139, 304 |
| MseI | TTAA | 1 cut(s) | 353 |
| Mva1269I | GAATGC | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 64 |
| NlaIII | CATG | 3 cut(s) | 91, 204, 235 |
| NmuCI | GTSAC | 1 cut(s) | 346 |
| PctI | GAATGC | 1 cut(s) | 159 |
| PfeI | GAWTC | 1 cut(s) | 173 |
| PleI | GAGTC | 1 cut(s) | 175 |
| PpsI | GAGTC | 1 cut(s) | 175 |
| SaqAI | TTAA | 1 cut(s) | 353 |
| SchI | GAGTC | 1 cut(s) | 176 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SetI | ASST | 4 cut(s) | 225, 322, 353, 419 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| SfcI | CTRYAG | 1 cut(s) | 29 |
| Sse9I | AATT | 3 cut(s) | 71, 138, 287 |
| SsiI | CCGC | 1 cut(s) | 403 |
| SspI | AATATT | 1 cut(s) | 380 |
| SspMI | CTAG | 2 cut(s) | 152, 164 |
| TaaI | ACNGT | 2 cut(s) | 47, 198 |
| TaqI | TCGA | 1 cut(s) | 51 |
| TasI | AATT | 3 cut(s) | 71, 138, 287 |
| TfiI | GAWTC | 1 cut(s) | 173 |
| Tru1I | TTAA | 1 cut(s) | 353 |
| Tru9I | TTAA | 1 cut(s) | 353 |
| TseFI | GTSAC | 1 cut(s) | 346 |
| Tsp45I | GTSAC | 1 cut(s) | 346 |
| VneI | GTGCAC | 1 cut(s) | 210 |
| XbaI | TCTAGA | 1 cut(s) | 163 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 268 |
| XspI | CTAG | 2 cut(s) | 152, 164 |