U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0431701 |
| rosa_laevigata | RLG00000008095 |
| rosa_roxburghii | Rroxscaffold_1G00025470 Rroxscaffold_5G00342860 |
| rosa_samantha | Rh1BG238100 Rh1DG266200 Rh5CG426600 Rh6CG103700 Rh6DG094600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 4 cut(s) | 18, 53, 127, 272 |
| Alw21I | GWGCWC | 1 cut(s) | 298 |
| Alw26I | GTCTC | 1 cut(s) | 137 |
| Alw44I | GTGCAC | 1 cut(s) | 294 |
| ApaLI | GTGCAC | 1 cut(s) | 294 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 225 |
| BaeGI | GKGCMC | 1 cut(s) | 298 |
| Bbv12I | GWGCWC | 1 cut(s) | 298 |
| BcoDI | GTCTC | 1 cut(s) | 137 |
| BfaI | CTAG | 2 cut(s) | 236, 248 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 148 |
| BmsI | GCATC | 1 cut(s) | 160 |
| Bse3DI | GCAATG | 2 cut(s) | 97, 271 |
| BseMI | GCAATG | 2 cut(s) | 97, 271 |
| BseSI | GKGCMC | 1 cut(s) | 298 |
| BsiHKAI | GWGCWC | 1 cut(s) | 298 |
| BsmAI | GTCTC | 1 cut(s) | 137 |
| BsmI | GAATGC | 1 cut(s) | 243 |
| Bsp1286I | GDGCHC | 1 cut(s) | 298 |
| BsrDI | GCAATG | 2 cut(s) | 97, 271 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 282 |
| Bst6I | CTCTTC | 1 cut(s) | 91 |
| BstMAI | GTCTC | 1 cut(s) | 137 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 148 |
| BstSLI | GKGCMC | 1 cut(s) | 298 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 301 |
| CviAII | CATG | 3 cut(s) | 172, 285, 316 |
| CviJI | RGCY | 1 cut(s) | 142 |
| CviKI_1 | RGCY | 1 cut(s) | 142 |
| Eam1104I | CTCTTC | 1 cut(s) | 91 |
| EarI | CTCTTC | 1 cut(s) | 91 |
| FaeI | CATG | 3 cut(s) | 175, 288, 319 |
| FaiI | YATR | 6 cut(s) | 63, 68, 78, 173, 286, 317 |
| FatI | CATG | 3 cut(s) | 171, 284, 315 |
| FspBI | CTAG | 2 cut(s) | 236, 248 |
| Hin1II | CATG | 3 cut(s) | 175, 288, 319 |
| HinfI | GANTC | 3 cut(s) | 49, 251, 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 296 |
| Hpy188I | TCNGA | 3 cut(s) | 220, 256, 329 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 134, 248 |
| Hpy8I | GTNNAC | 1 cut(s) | 296 |
| HpyAV | CCTTC | 2 cut(s) | 107, 222 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 282 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 161, 191, 296 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 148 |
| Hsp92II | CATG | 3 cut(s) | 175, 288, 319 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeI | CTAG | 2 cut(s) | 236, 248 |
| MboII | GAAGA | 1 cut(s) | 108 |
| MhlI | GDGCHC | 1 cut(s) | 298 |
| MluCI | AATT | 4 cut(s) | 18, 53, 155, 222 |
| MlyI | GAGTC | 1 cut(s) | 260 |
| MnlI | CCTC | 2 cut(s) | 193, 216 |
| MroXI | GAANNNNTTC | 1 cut(s) | 225 |
| MseI | TTAA | 1 cut(s) | 11 |
| Mva1269I | GAATGC | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 148 |
| NlaIII | CATG | 3 cut(s) | 175, 288, 319 |
| PctI | GAATGC | 1 cut(s) | 243 |
| PdmI | GAANNNNTTC | 1 cut(s) | 225 |
| PfeI | GAWTC | 2 cut(s) | 49, 257 |
| PleI | GAGTC | 1 cut(s) | 259 |
| PpsI | GAGTC | 1 cut(s) | 259 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| SchI | GAGTC | 1 cut(s) | 260 |
| SduI | GDGCHC | 1 cut(s) | 298 |
| SetI | ASST | 2 cut(s) | 118, 309 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| Sse9I | AATT | 4 cut(s) | 18, 53, 155, 222 |
| SspMI | CTAG | 2 cut(s) | 236, 248 |
| TaaI | ACNGT | 2 cut(s) | 131, 282 |
| TaqI | TCGA | 2 cut(s) | 135, 260 |
| TasI | AATT | 4 cut(s) | 18, 53, 155, 222 |
| TfiI | GAWTC | 2 cut(s) | 49, 257 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TspDTI | ATGAA | 3 cut(s) | 12, 126, 204 |
| VneI | GTGCAC | 1 cut(s) | 294 |
| XbaI | TCTAGA | 1 cut(s) | 247 |
| XmnI | GAANNNNTTC | 1 cut(s) | 225 |
| XspI | CTAG | 2 cut(s) | 236, 248 |