GTPase involved in pre-60S ribosomal subunit maturation
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0433491 |
| rosa_laevigata | RLG00000002418 |
| rosa_multiflora | Rmu_sc0000759.1_g000002 |
| rosa_samantha | Rh4AG323600 Rh4DG328100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 149 |
| AciI | CCGC | 1 cut(s) | 191 |
| AclWI | GGATC | 1 cut(s) | 196 |
| AcuI | CTGAAG | 1 cut(s) | 18 |
| AfaI | GTAC | 1 cut(s) | 9 |
| AflIII | ACRYGT | 1 cut(s) | 10 |
| AgsI | TTSAA | 2 cut(s) | 58, 163 |
| AluBI | AGCT | 2 cut(s) | 136, 157 |
| AluI | AGCT | 2 cut(s) | 136, 157 |
| Alw21I | GWGCWC | 1 cut(s) | 78 |
| AlwI | GGATC | 1 cut(s) | 196 |
| Aor13HI | TCCGGA | 1 cut(s) | 149 |
| Bbv12I | GWGCWC | 1 cut(s) | 78 |
| BccI | CCATC | 1 cut(s) | 274 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BisI | GCNGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmrI | ACTGGG | 1 cut(s) | 115 |
| BmsI | GCATC | 2 cut(s) | 19, 286 |
| BmuI | ACTGGG | 1 cut(s) | 115 |
| BsaAI | YACGTR | 1 cut(s) | 11 |
| BsaWI | WCCGGW | 1 cut(s) | 149 |
| Bse1I | ACTGG | 1 cut(s) | 110 |
| BseAI | TCCGGA | 1 cut(s) | 149 |
| BseGI | GGATG | 4 cut(s) | 34, 118, 146, 277 |
| BseNI | ACTGG | 1 cut(s) | 110 |
| BseRI | GAGGAG | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 1 cut(s) | 78 |
| BsiSI | CCGG | 1 cut(s) | 150 |
| Bsp1286I | GDGCHC | 1 cut(s) | 78 |
| Bsp13I | TCCGGA | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspACI | CCGC | 1 cut(s) | 191 |
| BspEI | TCCGGA | 1 cut(s) | 149 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BsrI | ACTGG | 1 cut(s) | 110 |
| BssMI | GATC | 1 cut(s) | 201 |
| BstBAI | YACGTR | 1 cut(s) | 11 |
| BstF5I | GGATG | 4 cut(s) | 34, 118, 146, 277 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BtsCI | GGATG | 4 cut(s) | 34, 118, 146, 277 |
| Csp6I | GTAC | 1 cut(s) | 8 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 2 cut(s) | 136, 157 |
| CviKI_1 | RGCY | 2 cut(s) | 136, 157 |
| CviQI | GTAC | 1 cut(s) | 8 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| Eco57I | CTGAAG | 1 cut(s) | 18 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 5 cut(s) | 44, 91, 93, 139, 210 |
| FatI | CATG | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 1 cut(s) | 192 |
| FokI | GGATG | 4 cut(s) | 41, 125, 133, 264 |
| Fsp4HI | GCNGC | 1 cut(s) | 192 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GluI | GCNGC | 1 cut(s) | 192 |
| HapII | CCGG | 1 cut(s) | 150 |
| Hin1II | CATG | 1 cut(s) | 212 |
| HindIII | AAGCTT | 1 cut(s) | 155 |
| HpaII | CCGG | 1 cut(s) | 150 |
| Hpy188I | TCNGA | 1 cut(s) | 37 |
| Hpy188III | TCNNGA | 1 cut(s) | 150 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyCH4IV | ACGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 82, 141 |
| HpySE526I | ACGT | 1 cut(s) | 10 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| Kpn2I | TCCGGA | 1 cut(s) | 149 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LpnPI | CCDG | 7 cut(s) | 11, 91, 163, 189, 194, 255, 294 |
| LweI | GCATC | 2 cut(s) | 19, 286 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MaeII | ACGT | 1 cut(s) | 10 |
| MaeIII | GTNAC | 1 cut(s) | 13 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MhlI | GDGCHC | 1 cut(s) | 78 |
| MluCI | AATT | 1 cut(s) | 260 |
| MnlI | CCTC | 5 cut(s) | 103, 213, 215, 255, 258 |
| MroI | TCCGGA | 1 cut(s) | 149 |
| MseI | TTAA | 1 cut(s) | 66 |
| MspA1I | CMGCKG | 1 cut(s) | 191 |
| MspI | CCGG | 1 cut(s) | 150 |
| NdeII | GATC | 1 cut(s) | 201 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NmuCI | GTSAC | 1 cut(s) | 13 |
| PkrI | GCNGC | 1 cut(s) | 193 |
| Ppu21I | YACGTR | 1 cut(s) | 11 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| RsaI | GTAC | 1 cut(s) | 9 |
| RsaNI | GTAC | 1 cut(s) | 8 |
| SaqAI | TTAA | 1 cut(s) | 66 |
| SatI | GCNGC | 1 cut(s) | 192 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| SduI | GDGCHC | 1 cut(s) | 78 |
| SetI | ASST | 5 cut(s) | 13, 138, 159, 178, 183 |
| SfaNI | GCATC | 2 cut(s) | 19, 286 |
| Sse9I | AATT | 1 cut(s) | 260 |
| SsiI | CCGC | 1 cut(s) | 191 |
| SspMI | CTAG | 1 cut(s) | 128 |
| TaiI | ACGT | 1 cut(s) | 13 |
| TasI | AATT | 1 cut(s) | 260 |
| TauI | GCSGC | 1 cut(s) | 194 |
| Tru1I | TTAA | 1 cut(s) | 66 |
| Tru9I | TTAA | 1 cut(s) | 66 |
| TseFI | GTSAC | 1 cut(s) | 13 |
| Tsp45I | GTSAC | 1 cut(s) | 13 |
| TspDTI | ATGAA | 1 cut(s) | 303 |
| XspI | CTAG | 1 cut(s) | 128 |