No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g27740 |
| prunus_persica | Prupe.1G307400_v2.0.a1 Prupe.1G307400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0435601 |
| rosa_laevigata | RLG00000006578 |
| rosa_multiflora | Rmu_sc0000051.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00376830 |
| rosa_rugosa | Rorug04G0287000 |
| rosa_samantha | Rh4BG350600 Rh4CG365300 Rh4DG345100 |
| rosa_wichuraiana | Rw4G029870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 141, 342 |
| AcsI | RAATTY | 3 cut(s) | 65, 89, 292 |
| AfaI | GTAC | 3 cut(s) | 254, 276, 340 |
| AflII | CTTAAG | 1 cut(s) | 205 |
| AgsI | TTSAA | 2 cut(s) | 28, 65 |
| AluBI | AGCT | 4 cut(s) | 204, 210, 237, 286 |
| AluI | AGCT | 4 cut(s) | 204, 210, 237, 286 |
| Alw26I | GTCTC | 1 cut(s) | 149 |
| AlwI | GGATC | 2 cut(s) | 141, 342 |
| ApoI | RAATTY | 3 cut(s) | 65, 89, 292 |
| BccI | CCATC | 1 cut(s) | 181 |
| BcoDI | GTCTC | 1 cut(s) | 149 |
| BfaI | CTAG | 1 cut(s) | 183 |
| BfrI | CTTAAG | 1 cut(s) | 205 |
| BmcAI | AGTACT | 1 cut(s) | 340 |
| BmrI | ACTGGG | 3 cut(s) | 51, 138, 321 |
| BmuI | ACTGGG | 3 cut(s) | 51, 138, 321 |
| BpmI | CTGGAG | 1 cut(s) | 339 |
| BpuEI | CTTGAG | 1 cut(s) | 92 |
| BsaI | GGTCTC | 1 cut(s) | 149 |
| Bse1I | ACTGG | 6 cut(s) | 57, 133, 278, 316, 322, 346 |
| BseGI | GGATG | 2 cut(s) | 85, 327 |
| BseMII | CTCAG | 2 cut(s) | 35, 90 |
| BseNI | ACTGG | 6 cut(s) | 57, 133, 278, 316, 322, 346 |
| BseRI | GAGGAG | 2 cut(s) | 89, 121 |
| BslFI | GGGAC | 1 cut(s) | 328 |
| BsmAI | GTCTC | 1 cut(s) | 149 |
| BsmFI | GGGAC | 1 cut(s) | 328 |
| Bso31I | GGTCTC | 1 cut(s) | 149 |
| Bsp143I | GATC | 3 cut(s) | 133, 162, 347 |
| BspCNI | CTCAG | 2 cut(s) | 34, 91 |
| BspPI | GGATC | 2 cut(s) | 141, 342 |
| BspTI | CTTAAG | 1 cut(s) | 205 |
| BspTNI | GGTCTC | 1 cut(s) | 149 |
| BsrI | ACTGG | 6 cut(s) | 57, 133, 278, 316, 322, 346 |
| BssMI | GATC | 3 cut(s) | 133, 162, 347 |
| BstAFI | CTTAAG | 1 cut(s) | 205 |
| BstC8I | GCNNGC | 1 cut(s) | 288 |
| BstDEI | CTNAG | 3 cut(s) | 21, 99, 192 |
| BstF5I | GGATG | 2 cut(s) | 85, 327 |
| BstKTI | GATC | 3 cut(s) | 136, 165, 350 |
| BstMAI | GTCTC | 1 cut(s) | 149 |
| BstMBI | GATC | 3 cut(s) | 133, 162, 347 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 234 |
| BstX2I | RGATCY | 1 cut(s) | 347 |
| BstYI | RGATCY | 1 cut(s) | 347 |
| BtsCI | GGATG | 2 cut(s) | 85, 327 |
| BtsIMutI | CAGTG | 1 cut(s) | 309 |
| Cac8I | GCNNGC | 1 cut(s) | 288 |
| Csp6I | GTAC | 3 cut(s) | 253, 275, 339 |
| CviAII | CATG | 2 cut(s) | 43, 198 |
| CviJI | RGCY | 7 cut(s) | 172, 196, 204, 210, 237, 286, 367 |
| CviKI_1 | RGCY | 7 cut(s) | 172, 196, 204, 210, 237, 286, 367 |
| CviQI | GTAC | 3 cut(s) | 253, 275, 339 |
| DdeI | CTNAG | 3 cut(s) | 21, 99, 192 |
| DpnI | GATC | 3 cut(s) | 135, 164, 349 |
| DpnII | GATC | 3 cut(s) | 133, 162, 347 |
| Eco31I | GGTCTC | 1 cut(s) | 149 |
| EcoRI | GAATTC | 1 cut(s) | 89 |
| FaeI | CATG | 2 cut(s) | 46, 201 |
| FaiI | YATR | 7 cut(s) | 38, 44, 96, 119, 180, 199, 233 |
| FaqI | GGGAC | 1 cut(s) | 328 |
| FatI | CATG | 2 cut(s) | 42, 197 |
| FokI | GGATG | 2 cut(s) | 92, 314 |
| FspBI | CTAG | 1 cut(s) | 183 |
| GsuI | CTGGAG | 1 cut(s) | 339 |
| Hin1II | CATG | 2 cut(s) | 46, 201 |
| HinfI | GANTC | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 138 |
| Hpy188III | TCNNGA | 4 cut(s) | 62, 71, 152, 351 |
| HpyCH4V | TGCA | 1 cut(s) | 290 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 99, 192 |
| Hsp92II | CATG | 2 cut(s) | 46, 201 |
| Kzo9I | GATC | 3 cut(s) | 133, 162, 347 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| LpnPI | CCDG | 8 cut(s) | 70, 114, 165, 291, 297, 303, 327, 364 |
| MaeI | CTAG | 1 cut(s) | 183 |
| MaeIII | GTNAC | 1 cut(s) | 187 |
| MalI | GATC | 3 cut(s) | 135, 164, 349 |
| MboI | GATC | 3 cut(s) | 133, 162, 347 |
| MboII | GAAGA | 2 cut(s) | 357, 366 |
| MflI | RGATCY | 1 cut(s) | 347 |
| MluCI | AATT | 5 cut(s) | 65, 89, 262, 292, 358 |
| MlyI | GAGTC | 1 cut(s) | 25 |
| MnlI | CCTC | 6 cut(s) | 30, 67, 70, 99, 102, 342 |
| MseI | TTAA | 2 cut(s) | 168, 206 |
| MspCI | CTTAAG | 1 cut(s) | 205 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 234 |
| NdeII | GATC | 3 cut(s) | 133, 162, 347 |
| NlaIII | CATG | 2 cut(s) | 46, 201 |
| NmuCI | GTSAC | 1 cut(s) | 187 |
| PleI | GAGTC | 1 cut(s) | 24 |
| PpsI | GAGTC | 1 cut(s) | 24 |
| PsuI | RGATCY | 1 cut(s) | 347 |
| RsaI | GTAC | 3 cut(s) | 254, 276, 340 |
| RsaNI | GTAC | 3 cut(s) | 253, 275, 339 |
| SaqAI | TTAA | 2 cut(s) | 168, 206 |
| Sau3AI | GATC | 3 cut(s) | 133, 162, 347 |
| ScaI | AGTACT | 1 cut(s) | 340 |
| SchI | GAGTC | 1 cut(s) | 25 |
| SetI | ASST | 4 cut(s) | 206, 212, 239, 288 |
| SmlI | CTYRAG | 2 cut(s) | 71, 205 |
| SmoI | CTYRAG | 2 cut(s) | 71, 205 |
| Sse9I | AATT | 5 cut(s) | 65, 89, 262, 292, 358 |
| SspMI | CTAG | 1 cut(s) | 183 |
| TasI | AATT | 5 cut(s) | 65, 89, 262, 292, 358 |
| TatI | WGTACW | 2 cut(s) | 252, 338 |
| Tru1I | TTAA | 2 cut(s) | 168, 206 |
| Tru9I | TTAA | 2 cut(s) | 168, 206 |
| TscAI | CASTG | 1 cut(s) | 316 |
| TseFI | GTSAC | 1 cut(s) | 187 |
| Tsp45I | GTSAC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 3 cut(s) | 59, 102, 316 |
| TspRI | CASTG | 1 cut(s) | 316 |
| Vha464I | CTTAAG | 1 cut(s) | 205 |
| XapI | RAATTY | 3 cut(s) | 65, 89, 292 |
| XspI | CTAG | 1 cut(s) | 183 |
| ZrmI | AGTACT | 1 cut(s) | 340 |