Rorug04G0287000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0017655
Physical Location & Seq
Reverse (-)
46023078 .. 46024544
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0287000.1

Sequence Viewer

Length: 1467 bp
ATGTGTTTCCCATGCTGGTACAAAGTGGTCGGCGCTTCCGAGTATCTGGTGATCACCGGTGCATGGATTGATGACTTGAAGGTGAAAAAGAAGGCATGGATCCTTCCCGGCCAGACCTACACCATCATCGACCTCTCTCCGGTCAACTACACCTTCAATGTCCAAGCCATGAGCGCCGAGAAGCTTCCATTCATGCTCCCTGCCGTCTTCACAATCGGCCCCCGCATCGACGACATGGACTCCGTCAAGAAGTACGCCAAGCTGCTCTCGAACCACGACAAGAACTCCAACCACGTGAAGGAGCTGGTCCAGGGCGTCATCGAGGGCGAGACTCGTGTGCTTGCGGCCTCGATGACGATGGAGGAGGTGTTCAAGGGGACCAAAGAGTTTAAGAAGGAGGTTTGGGACAAGGTTCAGCTGGAGCTCAACCAGTTCGGGCTTATAATTTACAATGCGAATGTCAAACAGTTGGTGGACGTTCAAGGACATGAGTATTTCAGTTACTTGGGGCAGAAGACTCAGATGGAGGCGGCCAACCAGGCCAAGGTTGACGTGGCGGAGGCCAGGATGAAAGGGGAGGTTGGCGCTAAGTTGAGGGAGGGGCAGACCCTGCAGAACGCGGCCAAGATCAATGCAGAGACGAAGATCATATCGACTCAGAGGGAAGGAGAGGGGAAAAAGGAGGAGATTAGGGTGAAGACGGAGGTCAAGGTTTATGAGAATCAGAAGGAAGCTGAGGTGGCTCAGGCCAATGCTGAGCTGGCAATGAAGAAGGCCGGATGGGCCAAGGAGGCGCAGGTGGCGCAGGTGGAGTCGACCAAGGCTGTGGCGTTGAGGGAAGCCGAGTTGCAGAAGAAGGTGGAGACGATGAATGCCCAGACTACTACCGAAAAGCTCAAGGCTGAGCTCTTGAGCAAGGCCAGCGTTGAGGCTGAAACGAAGGCGCGGGAGGCAGAATGGAATCTCTACCAGAAGCAGAAGGCAGCGGATGCCATTCTTTACCAAAAGAAGAAAGAGGCTGAGGCTACGGAAACAGCTGCTCAAGCACAGTTGTTTGCTCGTCAAAAGGCTGCTGATGGAGAATTCTATGCAAAGAAGAAAGAGGCCGAGGGACTGGTGGCACTCGGACAAGCCCATGGCACTTATCTGCACACTCTTCTGGAGGCAAATGGAGGCGACTATCCAGCTGCGAGAGACTACATGATGATCAATGGTGGGATGTATTCAGCGATTGCTAGGATTAATGCTGACGCCGTGAAAGGACTTCAGCCTAGGATTAGCATCTGGACTAATGGGGGAGAGGCTGCAGACGGTGGTGCTGGTGCTGGCAATGCGGCTATGAAGGAGATTGCCGGCCTTTATAAGACTCTGCCACCATTGTTACAGACGGTTCAAGACCAAACTGGAATGCAGCCTCCCAGTTGGATGGGAACTTTGTCAGTCGAAGATTCTCAGCGTAGGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

488

Amino Acids

53.89

Weight (kDa)

7.0

Isoelectric Point (pI)

23.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 9 - 188 4e-22 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017655)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g27740
prunus_persica Prupe.1G307400_v2.0.a1 Prupe.1G307400_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0435601
rosa_laevigata RLG00000006578
rosa_multiflora Rmu_sc0000051.1_g000001
rosa_roxburghii Rroxscaffold_5G00376830
rosa_rugosa Rorug04G0287000
rosa_samantha Rh4BG350600 Rh4CG365300 Rh4DG345100
rosa_wichuraiana Rw4G029870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 443, 1362
AarI CACCTGC 2 cut(s) 787, 796
Acc36I ACCTGC 2 cut(s) 787, 796
AccI GTMKAC 1 cut(s) 815
AccII CGCG 2 cut(s) 620, 946
AciI CCGC 8 cut(s) 223, 344, 530, 557, 620, 946, 986, 1334
AclWI GGATC 2 cut(s) 94, 107
AcoI YGGCCR 3 cut(s) 109, 531, 621
AcsI RAATTY 1 cut(s) 1082
AcuI CTGAAG 1 cut(s) 1250
AcvI CACGTG 1 cut(s) 295
AcyI GRCGYC 2 cut(s) 315, 1251
AfaI GTAC 2 cut(s) 20, 254
AfiI CCNNNNNNNGG 4 cut(s) 63, 139, 298, 544
AgeI ACCGGT 1 cut(s) 56
AgsI TTSAA 5 cut(s) 79, 157, 373, 482, 1394
AjiI CACGTC 1 cut(s) 553
AjnI CCWGG 3 cut(s) 309, 537, 563
AloI GAACNNNNNNTCC 2 cut(s) 353, 385
Alw21I GWGCWC 2 cut(s) 426, 909
Alw26I GTCTC 4 cut(s) 323, 632, 857, 1188
AlwI GGATC 2 cut(s) 94, 107
AlwNI CAGNNNCTG 1 cut(s) 610
ApeKI GCWGC 7 cut(s) 262, 983, 1037, 1070, 1187, 1304, 1411
ApoI RAATTY 1 cut(s) 1082
AseI ATTAAT 1 cut(s) 1242
AsiGI ACCGGT 1 cut(s) 56
AspA2I CCTAGG 1 cut(s) 1271
AspLEI GCGC 6 cut(s) 35, 176, 587, 796, 805, 946
AspS9I GGNCC 4 cut(s) 218, 307, 378, 783
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 4 cut(s) 46, 61, 94, 706
AvaII GGWCC 2 cut(s) 307, 378
AvrII CCTAGG 1 cut(s) 1271
BamHI GGATCC 1 cut(s) 99
BanII GRGCYC 2 cut(s) 426, 909
BauI CACGAG 1 cut(s) 333
BbrPI CACGTG 1 cut(s) 295
BbsI GAAGAC 3 cut(s) 199, 521, 704
Bbv12I GWGCWC 2 cut(s) 426, 909
BbvCI CCTCAGC 2 cut(s) 735, 1020
BbvI GCAGC 7 cut(s) 249, 995, 1024, 1057, 1174, 1291, 1423
BccI CCATC 6 cut(s) 131, 352, 517, 774, 1070, 1420
BceAI ACGGC 2 cut(s) 188, 1238
BciT130I CCWGG 3 cut(s) 311, 539, 565
BclI TGATCA 2 cut(s) 51, 1206
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 4 cut(s) 323, 632, 857, 1188
BfaI CTAG 2 cut(s) 1236, 1272
BfmI CTRYAG 2 cut(s) 611, 1305
BfoI RGCGCY 3 cut(s) 36, 177, 588
BfuAI ACCTGC 2 cut(s) 787, 796
BglI GCCNNNNNGGC 3 cut(s) 539, 782, 791
BlnI CCTAGG 1 cut(s) 1271
BlpI GCTNAGC 2 cut(s) 756, 903
Bme1390I CCNGG 4 cut(s) 108, 311, 539, 565
Bme18I GGWCC 2 cut(s) 307, 378
BmgBI CACGTC 1 cut(s) 553
BmgT120I GGNCC 4 cut(s) 218, 307, 378, 783
BmiI GGNNCC 3 cut(s) 101, 220, 379
BmrFI CCNGG 4 cut(s) 108, 311, 539, 565
BmrI ACTGGG 1 cut(s) 1413
BmsI GCATC 3 cut(s) 234, 979, 1290
BmuI ACTGGG 1 cut(s) 1413
BoxI GACNNNNGTC 1 cut(s) 704
BpiI GAAGAC 3 cut(s) 199, 521, 704
BpmI CTGGAG 2 cut(s) 440, 1181
Bpu10I CCTNAGC 3 cut(s) 735, 744, 1020
Bpu1102I GCTNAGC 2 cut(s) 756, 903
BpuEI CTTGAG 3 cut(s) 881, 931, 1026
BpuMI CCSGG 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 295
BsaBI GATNNNNATC 1 cut(s) 1280
BsaHI GRCGYC 2 cut(s) 315, 1251
BsaJI CCNNGG 7 cut(s) 310, 543, 786, 819, 1107, 1135, 1271
BsaWI WCCGGW 2 cut(s) 56, 139
BsaXI ACNNNNNCTCC 6 cut(s) 224, 254, 269, 299, 353, 383
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 139, 298, 544
Bse118I RCCGGY 2 cut(s) 56, 1352
Bse1I ACTGG 4 cut(s) 430, 1119, 1408, 1419
Bse3DI GCAATG 2 cut(s) 771, 1336
Bse8I GATNNNNATC 1 cut(s) 1280
BseBI CCWGG 3 cut(s) 311, 539, 565
BseDI CCNNGG 7 cut(s) 310, 543, 786, 819, 1107, 1135, 1271
BseGI GGATG 5 cut(s) 573, 785, 994, 1224, 1431
BseJI GATNNNNATC 1 cut(s) 1280
BseLI CCNNNNNNNGG 4 cut(s) 63, 139, 298, 544
BseMI GCAATG 2 cut(s) 771, 1336
BseMII CTCAG 8 cut(s) 533, 671, 726, 747, 758, 894, 1011, 1466
BseNI ACTGG 4 cut(s) 430, 1119, 1408, 1419
BseRI GAGGAG 2 cut(s) 377, 698
BseXI GCAGC 7 cut(s) 249, 995, 1024, 1057, 1174, 1291, 1423
BsgI GTGCAG 1 cut(s) 1133
Bsh1236I CGCG 2 cut(s) 620, 946
BshTI ACCGGT 1 cut(s) 56
BsiHKAI GWGCWC 2 cut(s) 426, 909
BsiSI CCGG 5 cut(s) 57, 108, 140, 777, 1353
BslFI GGGAC 3 cut(s) 391, 419, 1125
BslI CCNNNNNNNGG 4 cut(s) 63, 139, 298, 544
BsmAI GTCTC 4 cut(s) 323, 632, 857, 1188
BsmBI CGTCTC 2 cut(s) 632, 857
BsmFI GGGAC 3 cut(s) 391, 419, 1125
BsmI GAATGC 2 cut(s) 877, 1413
Bsp1286I GDGCHC 2 cut(s) 426, 909
Bsp143I GATC 5 cut(s) 51, 99, 627, 645, 1206
Bsp1720I GCTNAGC 2 cut(s) 756, 903
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 8 cut(s) 223, 344, 530, 557, 620, 946, 986, 1334
BspCNI CTCAG 8 cut(s) 532, 670, 727, 748, 757, 895, 1012, 1465
BspFNI CGCG 2 cut(s) 620, 946
BspLI GGNNCC 3 cut(s) 101, 220, 379
BspMAI CTGCAG 2 cut(s) 615, 1309
BspMI ACCTGC 2 cut(s) 787, 796
BspPI GGATC 2 cut(s) 94, 107
BsrDI GCAATG 2 cut(s) 771, 1336
BsrFI RCCGGY 2 cut(s) 56, 1352
BsrI ACTGG 4 cut(s) 430, 1119, 1408, 1419
BssAI RCCGGY 2 cut(s) 56, 1352
BssECI CCNNGG 7 cut(s) 310, 543, 786, 819, 1107, 1135, 1271
BssMI GATC 5 cut(s) 51, 99, 627, 645, 1206
BssNI GRCGYC 2 cut(s) 315, 1251
BssSI CACGAG 1 cut(s) 333
BssT1I CCWWGG 5 cut(s) 543, 786, 819, 1135, 1271
Bst2BI CACGAG 1 cut(s) 333
Bst2UI CCWGG 3 cut(s) 311, 539, 565
Bst4CI ACNGT 4 cut(s) 468, 1050, 1313, 1390
Bst6I CTCTTC 1 cut(s) 1161
BstACI GRCGYC 2 cut(s) 315, 1251
BstAPI GCANNNNNTGC 2 cut(s) 610, 989
BstBAI YACGTR 1 cut(s) 295
BstC8I GCNNGC 5 cut(s) 342, 762, 922, 1327, 1354
BstDEI CTNAG 9 cut(s) 519, 588, 657, 735, 744, 756, 903, 1020, 1452
BstDSI CCRYGG 1 cut(s) 1135
BstF5I GGATG 5 cut(s) 573, 785, 994, 1224, 1431
BstFNI CGCG 2 cut(s) 620, 946
BstH2I RGCGCY 3 cut(s) 36, 177, 588
BstHHI GCGC 6 cut(s) 35, 176, 587, 796, 805, 946
BstKTI GATC 5 cut(s) 54, 102, 630, 648, 1209
BstMAI GTCTC 4 cut(s) 323, 632, 857, 1188
BstMBI GATC 5 cut(s) 51, 99, 627, 645, 1206
BstNI CCWGG 3 cut(s) 311, 539, 565
BstPAI GACNNNNGTC 1 cut(s) 704
BstSCI CCNGG 4 cut(s) 106, 309, 537, 563
BstSFI CTRYAG 2 cut(s) 611, 1305
BstUI CGCG 2 cut(s) 620, 946
BstV1I GCAGC 7 cut(s) 249, 995, 1024, 1057, 1174, 1291, 1423
BstV2I GAAGAC 3 cut(s) 199, 521, 704
BstX2I RGATCY 1 cut(s) 99
BstXI CCANNNNNNTGG 2 cut(s) 826, 1426
BstYI RGATCY 1 cut(s) 99
BtgI CCRYGG 1 cut(s) 1135
BtrI CACGTC 1 cut(s) 553
BtsCI GGATG 5 cut(s) 573, 785, 994, 1224, 1431
BveI ACCTGC 2 cut(s) 787, 796
Cac8I GCNNGC 5 cut(s) 342, 762, 922, 1327, 1354
CaiI CAGNNNCTG 1 cut(s) 610
CfoI GCGC 6 cut(s) 35, 176, 587, 796, 805, 946
Cfr10I RCCGGY 2 cut(s) 56, 1352
Cfr13I GGNCC 4 cut(s) 218, 307, 378, 783
CseI GACGC 2 cut(s) 304, 1259
Csp6I GTAC 2 cut(s) 19, 253
CspAI ACCGGT 1 cut(s) 56
CviAII CATG 9 cut(s) 12, 63, 96, 169, 193, 235, 488, 1136, 1201
CviQI GTAC 2 cut(s) 19, 253
DdeI CTNAG 9 cut(s) 519, 588, 657, 735, 744, 756, 903, 1020, 1452
DpnI GATC 5 cut(s) 53, 101, 629, 647, 1208
DpnII GATC 5 cut(s) 51, 99, 627, 645, 1206
EaeI YGGCCR 3 cut(s) 109, 531, 621
Eam1104I CTCTTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 1161
EciI GGCGGA 1 cut(s) 572
Ecl136II GAGCTC 2 cut(s) 424, 907
Eco130I CCWWGG 5 cut(s) 543, 786, 819, 1135, 1271
Eco24I GRGCYC 2 cut(s) 426, 909
Eco47I GGWCC 2 cut(s) 307, 378
Eco53kI GAGCTC 2 cut(s) 424, 907
Eco57I CTGAAG 1 cut(s) 1250
Eco72I CACGTG 1 cut(s) 295
EcoICRI GAGCTC 2 cut(s) 424, 907
EcoRI GAATTC 1 cut(s) 1082
EcoRII CCWGG 3 cut(s) 309, 537, 563
EcoT14I CCWWGG 5 cut(s) 543, 786, 819, 1135, 1271
EcoT38I GRGCYC 2 cut(s) 426, 909
ErhI CCWWGG 5 cut(s) 543, 786, 819, 1135, 1271
Esp3I CGTCTC 2 cut(s) 632, 857
FaeI CATG 9 cut(s) 15, 66, 99, 172, 196, 238, 491, 1139, 1204
FaqI GGGAC 3 cut(s) 391, 419, 1125
FatI CATG 9 cut(s) 11, 62, 95, 168, 192, 234, 487, 1135, 1200
FauI CCCGC 2 cut(s) 230, 939
FbaI TGATCA 2 cut(s) 51, 1206
FblI GTMKAC 1 cut(s) 815
FokI GGATG 5 cut(s) 580, 792, 1001, 1231, 1438
FriOI GRGCYC 2 cut(s) 426, 909
FspBI CTAG 2 cut(s) 1236, 1272
GlaI GCGC 6 cut(s) 34, 175, 586, 795, 804, 945
GsuI CTGGAG 2 cut(s) 440, 1181
HaeII RGCGCY 3 cut(s) 36, 177, 588
HapII CCGG 5 cut(s) 57, 108, 140, 777, 1353
HgaI GACGC 2 cut(s) 304, 1259
HhaI GCGC 6 cut(s) 35, 176, 587, 796, 805, 946
Hin1I GRCGYC 2 cut(s) 315, 1251
Hin1II CATG 9 cut(s) 15, 66, 99, 172, 196, 238, 491, 1139, 1204
Hin6I GCGC 6 cut(s) 33, 174, 585, 794, 803, 944
HinP1I GCGC 6 cut(s) 33, 174, 585, 794, 803, 944
HincII GTYRAC 3 cut(s) 145, 550, 816
HindII GTYRAC 3 cut(s) 145, 550, 816
HindIII AAGCTT 1 cut(s) 182
HinfI GANTC 9 cut(s) 239, 331, 517, 655, 721, 812, 961, 1366, 1448
HpaII CCGG 5 cut(s) 57, 108, 140, 777, 1353
HphI GGTGA 4 cut(s) 46, 61, 94, 706
Hpy166II GTNNAC 4 cut(s) 145, 475, 550, 816
Hpy188I TCNGA 5 cut(s) 40, 522, 660, 726, 1127
Hpy188III TCNNGA 6 cut(s) 247, 268, 910, 1160, 1285, 1394
Hpy8I GTNNAC 4 cut(s) 145, 475, 550, 816
Hpy99I CGWCG 1 cut(s) 233
HpyCH4III ACNGT 4 cut(s) 468, 1050, 1313, 1390
HpyCH4IV ACGT 3 cut(s) 294, 477, 552
HpyCH4V TGCA 8 cut(s) 62, 613, 635, 850, 1091, 1150, 1307, 1411
HpyF3I CTNAG 9 cut(s) 519, 588, 657, 735, 744, 756, 903, 1020, 1452
HpySE526I ACGT 3 cut(s) 294, 477, 552
Hsp92I GRCGYC 2 cut(s) 315, 1251
Hsp92II CATG 9 cut(s) 15, 66, 99, 172, 196, 238, 491, 1139, 1204
HspAI GCGC 6 cut(s) 33, 174, 585, 794, 803, 944
KroI GCCGGC 1 cut(s) 1352
KroNI GCCGGC 1 cut(s) 1354
Ksp22I TGATCA 2 cut(s) 51, 1206
Kzo9I GATC 5 cut(s) 51, 99, 627, 645, 1206
LmnI GCTCC 3 cut(s) 201, 301, 421
Lsp1109I GCAGC 7 cut(s) 249, 995, 1024, 1057, 1174, 1291, 1423
LweI GCATC 3 cut(s) 234, 979, 1290
MaeI CTAG 2 cut(s) 1236, 1272
MaeII ACGT 3 cut(s) 294, 477, 552
MaeIII GTNAC 2 cut(s) 500, 1380
MalI GATC 5 cut(s) 53, 101, 629, 647, 1208
MboI GATC 5 cut(s) 51, 99, 627, 645, 1206
MflI RGATCY 1 cut(s) 99
MhlI GDGCHC 2 cut(s) 426, 909
MluCI AATT 3 cut(s) 444, 1082, 1462
MlyI GAGTC 6 cut(s) 233, 325, 511, 649, 821, 1360
MmeI TCCRAC 2 cut(s) 312, 1403
MroNI GCCGGC 1 cut(s) 1352
MseI TTAA 2 cut(s) 390, 1242
MspA1I CMGCKG 4 cut(s) 418, 986, 1037, 1187
MspI CCGG 5 cut(s) 57, 108, 140, 777, 1353
MspR9I CCNGG 4 cut(s) 108, 311, 539, 565
Mva1269I GAATGC 2 cut(s) 877, 1413
MvaI CCWGG 3 cut(s) 311, 539, 565
MvnI CGCG 2 cut(s) 620, 946
NaeI GCCGGC 1 cut(s) 1354
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 1135
NdeII GATC 5 cut(s) 51, 99, 627, 645, 1206
NgoMIV GCCGGC 1 cut(s) 1352
NlaIII CATG 9 cut(s) 15, 66, 99, 172, 196, 238, 491, 1139, 1204
NlaIV GGNNCC 3 cut(s) 101, 220, 379
NmeAIII GCCGAG 3 cut(s) 202, 868, 1132
PaqCI CACCTGC 2 cut(s) 787, 796
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PctI GAATGC 2 cut(s) 877, 1413
PdiI GCCGGC 1 cut(s) 1354
PfeI GAWTC 3 cut(s) 721, 961, 1448
PflFI GACNNNGTC 1 cut(s) 242
PinAI ACCGGT 1 cut(s) 56
PleI GAGTC 6 cut(s) 233, 325, 511, 649, 820, 1360
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 6 cut(s) 233, 325, 511, 649, 820, 1360
Ppu21I YACGTR 1 cut(s) 295
PshAI GACNNNNGTC 1 cut(s) 704
PshBI ATTAAT 1 cut(s) 1242
PsiI TTATAA 2 cut(s) 443, 1362
Psp124BI GAGCTC 2 cut(s) 426, 909
Psp6I CCWGG 3 cut(s) 309, 537, 563
PspCI CACGTG 1 cut(s) 295
PspGI CCWGG 3 cut(s) 309, 537, 563
PspN4I GGNNCC 3 cut(s) 101, 220, 379
PspPI GGNCC 4 cut(s) 218, 307, 378, 783
PstI CTGCAG 2 cut(s) 615, 1309
PstNI CAGNNNCTG 1 cut(s) 610
PsuI RGATCY 1 cut(s) 99
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 3 cut(s) 418, 1037, 1187
RsaI GTAC 2 cut(s) 20, 254
RsaNI GTAC 2 cut(s) 19, 253
SacI GAGCTC 2 cut(s) 426, 909
SalI GTCGAC 1 cut(s) 814
SaqAI TTAA 2 cut(s) 390, 1242
Sau3AI GATC 5 cut(s) 51, 99, 627, 645, 1206
Sau96I GGNCC 4 cut(s) 218, 307, 378, 783
SchI GAGTC 6 cut(s) 233, 325, 511, 649, 821, 1360
ScrFI CCNGG 4 cut(s) 108, 311, 539, 565
SduI GDGCHC 2 cut(s) 426, 909
SfaNI GCATC 3 cut(s) 234, 979, 1290
SfcI CTRYAG 2 cut(s) 611, 1305
SfiI GGCCNNNNNGGCC 2 cut(s) 539, 782
SgrAI CRCCGGYG 1 cut(s) 56
SinI GGWCC 2 cut(s) 307, 378
SmlI CTYRAG 3 cut(s) 896, 910, 1041
SmoI CTYRAG 3 cut(s) 896, 910, 1041
Sse9I AATT 3 cut(s) 444, 1082, 1462
SsiI CCGC 8 cut(s) 223, 344, 530, 557, 620, 946, 986, 1334
SspMI CTAG 2 cut(s) 1236, 1272
SstI GAGCTC 2 cut(s) 426, 909
StyD4I CCNGG 4 cut(s) 106, 309, 537, 563
StyI CCWWGG 5 cut(s) 543, 786, 819, 1135, 1271
TaaI ACNGT 4 cut(s) 468, 1050, 1313, 1390
TaiI ACGT 3 cut(s) 297, 480, 555
TaqI TCGA 8 cut(s) 129, 228, 269, 321, 350, 653, 815, 1443
TasI AATT 3 cut(s) 444, 1082, 1462
TauI GCSGC 4 cut(s) 347, 533, 623, 1337
TfiI GAWTC 3 cut(s) 721, 961, 1448
Tru1I TTAA 2 cut(s) 390, 1242
Tru9I TTAA 2 cut(s) 390, 1242
TseI GCWGC 7 cut(s) 262, 983, 1037, 1070, 1187, 1304, 1411
TspDTI ATGAA 5 cut(s) 181, 584, 782, 884, 1355
TspGWI ACGGA 3 cut(s) 232, 716, 1043
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 307, 378
VspI ATTAAT 1 cut(s) 1242
XapI RAATTY 1 cut(s) 1082
XcmI CCANNNNNNNNNTGG 2 cut(s) 550, 757
XmaJI CCTAGG 1 cut(s) 1271
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 2 cut(s) 1236, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.