RchiOBHm_Chr4g0435911

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0017166
Physical Location & Seq
Reverse (-)
59326962 .. 59328416
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40430

Sequence Viewer

Length: 1338 bp
ATGGTCTCACTCTCCCAACTCCCATTCTTCTTCTTCTGCTTCTTCTTCTTCACAACCCTCTGCAACTCCCAACACTACCTCCAACTCCCGCTTCTCCATACAGACCCCTTCCCCACACCCTCCCAAGCCCTCTCTCTCGACACCCACCGCCTCTCTCTCCTCCACAACCACAACCGCCGCCGCTCCGCCACCTCCCCCGTCGTCTCCGGCGCCTCCACCGGCTCCGGCCAGTACTTCGTCCACCTCCGCCTCGGCTCTCCCCCCCAGAGCCTCCTCCTCGTCGCCGACACCGGCAGCGATCTCGTCTGGCTCCGCTGCTCCGCCTGCAAAAACTGCTCTAATCGGAGCCCCGGCTCCGCTTTCCTCGCCCGCCACTCCACCACATTCTCACCCTACCACTGCTACGACTCCACCTGCGACCTCGTCCCCCGACCCGACCCGAGTCCGTGTAACCATACCCGGCTCCACAGCCCCTGTCGCTACGAGTATTCCTACTCCGACGGATCCAGAACCGCCGGCTTCTTCTCCAGAGAAACCACCACTCTAAACACCAGCTCCGGGACACCGGCGAAGCTCTCCGACTTGGCGTTCGGGTGCGGGTTTGATGTTTCGGGTCCGAGCTTAACCGGGGCGAGCCTCGGCGGGGCCCACGGCGTCATGGGCCTGGGAAGAGGCCCAATCTCGTTTGTCTCGCAGCTGGGTCGCCGATTCGGGAACAAATTCTCCTACTGTCTACTGGACTACACCCGATCGCCGCCGCCGACGAGTTACCTCAGGATCGGAGCCTCCAAATCCGACGTCGTTTCGAAACTGAGCTTCACACGCTTGCTGCTCAACCCTCTCTCCCCTACATTTTACTACATTGGTATCAAGTCCGTCTCCGTCAACGGCGTTAAATTACCTGTTCGCCCCTCCGTTTGGTCCCTCGACGAGCTCGGTAACGGCGGCACGGTGATCGACTCGGGGACGACGTTAACTTTCTTGCCCGAGCCGGCTTACCGTCTAATCCTGGCGGCGTTTAGACGGAGCTTGAAGAAGCTGGCTAGCCGAGCCGAGCCGACTCCGGGGTTCGATCTCTGTGTCAACGTGTCGGGTTTAGCGCGGGCGAGACTACCAAAGCTGAGTTTCGGACTCGCAGGTGGCTCGGTTTTCGCGCCGCCGCCGGGGAACTATTTCATTGAGACAATGGATCGGGTCGAGTGCTTGGCGATCCAACCCGTTGATTCCGGGTCGGGCTTTTCGGTGATAGGGAATCTTATGCAACAAGGATTCTTGTTTGAGTTTGACAAGGACCGCTCGCGGCTCGGTTTTTCACGTCATGGCTGCGCGCTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

445

Amino Acids

48.33

Weight (kDa)

9.26

Isoelectric Point (pI)

53.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 77 - 438 1.4e-10 Eukaryotic aspartyl protease
TAXi_N PF14543 78 - 261 6.9e-47 Xylanase inhibitor N-terminal
TAXi_C PF14541 286 - 438 1.7e-34 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017166)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25700 AT3G25700
fragaria_vesca FvH4_4g28140
malus_domestica MD16G1048900.v1.1
prunus_persica Prupe.1G304800_v2.0.a1
pyrus_communis pycom16g04270
rosa_chinensis RchiOBHm_Chr4g0435911
rosa_laevigata RLG00000006550
rosa_roxburghii Rroxscaffold_5G00377090
rosa_rugosa Rorug04G0290700
rosa_samantha Rh4BG353800 Rh4DG347600
rosa_wichuraiana Rw4G030130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 422, 1127
AatII GACGTC 1 cut(s) 801
Acc36I ACCTGC 2 cut(s) 422, 1127
AccB1I GGYRCC 1 cut(s) 209
AccBSI CCGCTC 2 cut(s) 183, 1296
AccI GTMKAC 1 cut(s) 733
AccII CGCG 4 cut(s) 1102, 1154, 1300, 1328
AclWI GGATC 5 cut(s) 498, 511, 785, 1197, 1204
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 1 cut(s) 719
AcuI CTGAAG 1 cut(s) 1316
AcyI GRCGYC 3 cut(s) 210, 654, 798
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 5 cut(s) 558, 643, 918, 1064, 1163
AflIII ACRYGT 1 cut(s) 1086
AgsI TTSAA 1 cut(s) 1033
AjiI CACGTC 1 cut(s) 1316
AjnI CCWGG 2 cut(s) 663, 1008
AjuI GAANNNNNNNTTGG 2 cut(s) 75, 107
AloI GAACNNNNNNTCC 2 cut(s) 707, 739
AluBI AGCT 9 cut(s) 555, 574, 621, 697, 816, 934, 1029, 1039, 1120
AluI AGCT 9 cut(s) 555, 574, 621, 697, 816, 934, 1029, 1039, 1120
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 6 cut(s) 10, 208, 694, 883, 1102, 1175
AlwI GGATC 5 cut(s) 498, 511, 785, 1197, 1204
AlwNI CAGNNNCTG 1 cut(s) 474
Ama87I CYCGRG 3 cut(s) 439, 961, 986
AoxI GGCC 4 cut(s) 226, 645, 661, 673
ApaI GGGCCC 1 cut(s) 649
ApeKI GCWGC 5 cut(s) 294, 315, 694, 829, 1323
ApoI RAATTY 1 cut(s) 719
ArsI GACNNNNNNTTYG 4 cut(s) 572, 604, 783, 815
Asp700I GAANNNNTTC 2 cut(s) 719, 1172
AspLEI GCGC 5 cut(s) 212, 1102, 1156, 1328, 1330
AspS9I GGNCC 7 cut(s) 614, 645, 646, 661, 674, 921, 1291
AsuC2I CCSGG 7 cut(s) 351, 460, 559, 628, 1065, 1164, 1228
AsuHPI GGTGA 3 cut(s) 381, 964, 1255
AsuII TTCGAA 1 cut(s) 806
AsuNHI GCTAGC 1 cut(s) 1043
AvaI CYCGRG 3 cut(s) 439, 961, 986
AvaII GGWCC 3 cut(s) 614, 921, 1291
AxyI CCTNAGG 1 cut(s) 773
BaeGI GKGCMC 1 cut(s) 649
BaeI ACNNNNGTAYC 2 cut(s) 850, 883
BamHI GGATCC 1 cut(s) 503
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 3 cut(s) 350, 649, 936
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 5 cut(s) 302, 306, 706, 816, 1310
BceAI ACGGC 3 cut(s) 667, 904, 958
BcgI CGANNNNNNTGC 8 cut(s) 283, 317, 683, 717, 937, 971, 1125, 1159
BciT130I CCWGG 2 cut(s) 665, 1010
BcnI CCSGG 7 cut(s) 351, 460, 559, 628, 1065, 1164, 1228
BcoDI GTCTC 6 cut(s) 10, 208, 694, 883, 1102, 1175
BfaI CTAG 1 cut(s) 1044
BfoI RGCGCY 1 cut(s) 213
BfuAI ACCTGC 2 cut(s) 422, 1127
BmcAI AGTACT 1 cut(s) 233
Bme1390I CCNGG 9 cut(s) 351, 460, 559, 628, 665, 1010, 1065, 1164, 1228
Bme18I GGWCC 3 cut(s) 614, 921, 1291
BmeT110I CYCGRG 3 cut(s) 439, 961, 986
BmgBI CACGTC 1 cut(s) 1316
BmgT120I GGNCC 7 cut(s) 614, 645, 646, 661, 674, 921, 1291
BmrFI CCNGG 9 cut(s) 351, 460, 559, 628, 665, 1010, 1065, 1164, 1228
BmtI GCTAGC 1 cut(s) 1047
BoxI GACNNNNGTC 1 cut(s) 441
BpmI CTGGAG 1 cut(s) 511
Bpu14I TTCGAA 1 cut(s) 806
BpuMI CCSGG 7 cut(s) 351, 460, 559, 628, 1065, 1164, 1228
BsaHI GRCGYC 3 cut(s) 210, 654, 798
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 8 cut(s) 250, 349, 627, 637, 649, 664, 1064, 1163
BsaXI ACNNNNNCTCC 8 cut(s) 63, 93, 539, 569, 707, 737, 827, 857
Bsc4I CCNNNNNNNGG 5 cut(s) 558, 643, 918, 1064, 1163
Bse118I RCCGGY 5 cut(s) 218, 290, 515, 565, 991
Bse1I ACTGG 2 cut(s) 229, 741
Bse21I CCTNAGG 1 cut(s) 773
BseBI CCWGG 2 cut(s) 665, 1010
BseDI CCNNGG 8 cut(s) 250, 349, 627, 637, 649, 664, 1064, 1163
BseLI CCNNNNNNNGG 5 cut(s) 558, 643, 918, 1064, 1163
BseMII CTCAG 3 cut(s) 787, 803, 1112
BseNI ACTGG 2 cut(s) 229, 741
BsePI GCGCGC 1 cut(s) 1326
BseRI GAGGAG 3 cut(s) 149, 263, 266
BseSI GKGCMC 1 cut(s) 649
BseXI GCAGC 5 cut(s) 302, 306, 706, 816, 1310
BseYI CCCAGC 1 cut(s) 697
Bsh1236I CGCG 4 cut(s) 1102, 1154, 1300, 1328
Bsh1285I CGRYCG 1 cut(s) 752
BshFI GGCC 4 cut(s) 228, 647, 663, 675
BshNI GGYRCC 1 cut(s) 209
BsiEI CGRYCG 1 cut(s) 752
BsiHKAI GWGCWC 1 cut(s) 936
BsiHKCI CYCGRG 3 cut(s) 439, 961, 986
BslFI GGGAC 4 cut(s) 410, 574, 907, 979
BslI CCNNNNNNNGG 5 cut(s) 558, 643, 918, 1064, 1163
BsmAI GTCTC 6 cut(s) 10, 208, 694, 883, 1102, 1175
BsmBI CGTCTC 2 cut(s) 208, 883
BsmFI GGGAC 4 cut(s) 410, 574, 907, 979
BsnI GGCC 4 cut(s) 228, 647, 663, 675
Bso31I GGTCTC 1 cut(s) 10
BsoBI CYCGRG 3 cut(s) 439, 961, 986
Bsp119I TTCGAA 1 cut(s) 806
Bsp120I GGGCCC 1 cut(s) 645
Bsp1286I GDGCHC 3 cut(s) 350, 649, 936
Bsp143I GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
BspANI GGCC 4 cut(s) 228, 647, 663, 675
BspCNI CTCAG 3 cut(s) 786, 804, 1113
BspFNI CGCG 4 cut(s) 1102, 1154, 1300, 1328
BspMI ACCTGC 2 cut(s) 422, 1127
BspOI GCTAGC 1 cut(s) 1047
BspPI GGATC 5 cut(s) 498, 511, 785, 1197, 1204
BspT104I TTCGAA 1 cut(s) 806
BspT107I GGYRCC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 2 cut(s) 183, 1296
BsrFI RCCGGY 5 cut(s) 218, 290, 515, 565, 991
BsrI ACTGG 2 cut(s) 229, 741
BssAI RCCGGY 5 cut(s) 218, 290, 515, 565, 991
BssECI CCNNGG 8 cut(s) 250, 349, 627, 637, 649, 664, 1064, 1163
BssHII GCGCGC 1 cut(s) 1326
BssMI GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
BssNI GRCGYC 3 cut(s) 210, 654, 798
Bst2UI CCWGG 2 cut(s) 665, 1010
Bst4CI ACNGT 3 cut(s) 731, 952, 1001
Bst6I CTCTTC 1 cut(s) 664
BstACI GRCGYC 3 cut(s) 210, 654, 798
BstAPI GCANNNNNTGC 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 806
BstDEI CTNAG 3 cut(s) 773, 812, 1121
BstDSI CCRYGG 1 cut(s) 649
BstFNI CGCG 4 cut(s) 1102, 1154, 1300, 1328
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 5 cut(s) 212, 1102, 1156, 1328, 1330
BstKTI GATC 8 cut(s) 301, 506, 752, 780, 957, 1075, 1192, 1212
BstMAI GTCTC 6 cut(s) 10, 208, 694, 883, 1102, 1175
BstMBI GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
BstMCI CGRYCG 1 cut(s) 752
BstMWI GCNNNNNNNGC 7 cut(s) 324, 333, 365, 477, 660, 822, 1049
BstNI CCWGG 2 cut(s) 665, 1010
BstPAI GACNNNNGTC 1 cut(s) 441
BstSCI CCNGG 9 cut(s) 349, 458, 557, 626, 663, 1008, 1063, 1162, 1226
BstSLI GKGCMC 1 cut(s) 649
BstUI CGCG 4 cut(s) 1102, 1154, 1300, 1328
BstV1I GCAGC 5 cut(s) 302, 306, 706, 816, 1310
BstX2I RGATCY 1 cut(s) 503
BstYI RGATCY 1 cut(s) 503
Bsu36I CCTNAGG 1 cut(s) 773
BsuRI GGCC 4 cut(s) 228, 647, 663, 675
BtgI CCRYGG 1 cut(s) 649
BtrI CACGTC 1 cut(s) 1316
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 1 cut(s) 397
BveI ACCTGC 2 cut(s) 422, 1127
CaiI CAGNNNCTG 1 cut(s) 474
CfoI GCGC 5 cut(s) 212, 1102, 1156, 1328, 1330
Cfr10I RCCGGY 5 cut(s) 218, 290, 515, 565, 991
Cfr13I GGNCC 7 cut(s) 614, 645, 646, 661, 674, 921, 1291
CseI GACGC 1 cut(s) 643
Csp6I GTAC 1 cut(s) 232
CviAII CATG 2 cut(s) 658, 1319
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 3 cut(s) 773, 812, 1121
DinI GGCGCC 1 cut(s) 211
DpnI GATC 8 cut(s) 300, 505, 751, 779, 956, 1074, 1191, 1211
DpnII GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 1 cut(s) 664
EarI CTCTTC 1 cut(s) 664
EciI GGCGGA 3 cut(s) 175, 236, 310
Ecl136II GAGCTC 1 cut(s) 934
Eco24I GRGCYC 3 cut(s) 350, 649, 936
Eco31I GGTCTC 1 cut(s) 10
Eco47I GGWCC 3 cut(s) 614, 921, 1291
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 1 cut(s) 1316
Eco81I CCTNAGG 1 cut(s) 773
Eco88I CYCGRG 3 cut(s) 439, 961, 986
EcoICRI GAGCTC 1 cut(s) 934
EcoO109I RGGNCCY 1 cut(s) 645
EcoRII CCWGG 2 cut(s) 663, 1008
EcoT38I GRGCYC 3 cut(s) 350, 649, 936
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
Esp3I CGTCTC 2 cut(s) 208, 883
FaeI CATG 2 cut(s) 661, 1322
FaiI YATR 5 cut(s) 99, 456, 659, 1259, 1320
FaqI GGGAC 4 cut(s) 410, 574, 907, 979
FatI CATG 2 cut(s) 657, 1318
FauI CCCGC 5 cut(s) 96, 377, 590, 635, 1095
FblI GTMKAC 1 cut(s) 733
FriOI GRGCYC 3 cut(s) 350, 649, 936
FspBI CTAG 1 cut(s) 1044
GlaI GCGC 5 cut(s) 211, 1101, 1155, 1327, 1329
GsaI CCCAGC 1 cut(s) 701
GsuI CTGGAG 1 cut(s) 511
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 4 cut(s) 228, 647, 663, 675
HgaI GACGC 1 cut(s) 643
HhaI GCGC 5 cut(s) 212, 1102, 1156, 1328, 1330
Hin1I GRCGYC 3 cut(s) 210, 654, 798
Hin1II CATG 2 cut(s) 661, 1322
Hin6I GCGC 5 cut(s) 210, 1100, 1154, 1326, 1328
HinP1I GCGC 5 cut(s) 210, 1100, 1154, 1326, 1328
HincII GTYRAC 3 cut(s) 886, 975, 1084
HindII GTYRAC 3 cut(s) 886, 975, 1084
HinfI GANTC 9 cut(s) 407, 442, 708, 959, 1060, 1131, 1223, 1252, 1269
HpaI GTTAAC 1 cut(s) 975
HphI GGTGA 3 cut(s) 381, 964, 1255
Hpy166II GTNNAC 5 cut(s) 241, 734, 886, 975, 1084
Hpy188I TCNGA 7 cut(s) 345, 499, 580, 618, 782, 796, 1130
Hpy188III TCNNGA 5 cut(s) 137, 507, 528, 712, 775
Hpy8I GTNNAC 5 cut(s) 241, 734, 886, 975, 1084
Hpy99I CGWCG 8 cut(s) 203, 284, 503, 766, 800, 803, 932, 973
HpyAV CCTTC 1 cut(s) 118
HpyCH4III ACNGT 3 cut(s) 731, 952, 1001
HpyCH4IV ACGT 4 cut(s) 798, 971, 1086, 1315
HpyCH4V TGCA 3 cut(s) 63, 327, 1261
HpyF10VI GCNNNNNNNGC 7 cut(s) 324, 333, 365, 477, 660, 822, 1049
HpyF3I CTNAG 3 cut(s) 773, 812, 1121
HpySE526I ACGT 4 cut(s) 798, 971, 1086, 1315
Hsp92I GRCGYC 3 cut(s) 210, 654, 798
Hsp92II CATG 2 cut(s) 661, 1322
HspAI GCGC 5 cut(s) 210, 1100, 1154, 1326, 1328
KasI GGCGCC 1 cut(s) 209
KroI GCCGGC 2 cut(s) 515, 991
KroNI GCCGGC 2 cut(s) 517, 993
KspAI GTTAAC 1 cut(s) 975
Kzo9I GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
Lsp1109I GCAGC 5 cut(s) 302, 306, 706, 816, 1310
MaeI CTAG 1 cut(s) 1044
MaeII ACGT 4 cut(s) 798, 971, 1086, 1315
MaeIII GTNAC 3 cut(s) 449, 767, 938
MalI GATC 8 cut(s) 300, 505, 751, 779, 956, 1074, 1191, 1211
MbiI CCGCTC 2 cut(s) 183, 1296
MboI GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
MboII GAAGA 9 cut(s) 19, 22, 25, 34, 37, 40, 514, 681, 1045
MflI RGATCY 1 cut(s) 503
MhlI GDGCHC 3 cut(s) 350, 649, 936
MluCI AATT 2 cut(s) 719, 896
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 5 cut(s) 401, 451, 953, 1054, 1125
MmeI TCCRAC 5 cut(s) 106, 522, 603, 819, 1237
MroNI GCCGGC 2 cut(s) 515, 991
MroXI GAANNNNTTC 2 cut(s) 719, 1172
MseI TTAA 3 cut(s) 623, 894, 974
MspA1I CMGCKG 2 cut(s) 315, 697
MspR9I CCNGG 9 cut(s) 351, 460, 559, 628, 665, 1010, 1065, 1164, 1228
MvaI CCWGG 2 cut(s) 665, 1010
MvnI CGCG 4 cut(s) 1102, 1154, 1300, 1328
MwoI GCNNNNNNNGC 7 cut(s) 324, 333, 365, 477, 660, 822, 1049
NaeI GCCGGC 2 cut(s) 517, 993
NarI GGCGCC 1 cut(s) 210
NciI CCSGG 7 cut(s) 351, 460, 559, 628, 1065, 1164, 1228
NdeII GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
NgoMIV GCCGGC 2 cut(s) 515, 991
NheI GCTAGC 1 cut(s) 1043
NlaIII CATG 2 cut(s) 661, 1322
NmeAIII GCCGAG 4 cut(s) 231, 618, 1073, 1078
NspV TTCGAA 1 cut(s) 806
PaqCI CACCTGC 2 cut(s) 422, 1127
PauI GCGCGC 1 cut(s) 1326
PcsI WCGNNNNNNNCGW 2 cut(s) 758, 968
PdiI GCCGGC 2 cut(s) 517, 993
PdmI GAANNNNTTC 2 cut(s) 719, 1172
PfeI GAWTC 4 cut(s) 708, 1223, 1252, 1269
PflFI GACNNNGTC 1 cut(s) 422
PfoI TCCNGGA 1 cut(s) 557
Ple19I CGATCG 1 cut(s) 752
PleI GAGTC 5 cut(s) 401, 450, 953, 1054, 1125
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 5 cut(s) 401, 450, 953, 1054, 1125
PshAI GACNNNNGTC 1 cut(s) 441
Psp124BI GAGCTC 1 cut(s) 936
Psp6I CCWGG 2 cut(s) 663, 1008
PspFI CCCAGC 1 cut(s) 697
PspGI CCWGG 2 cut(s) 663, 1008
PspOMI GGGCCC 1 cut(s) 645
PspPI GGNCC 7 cut(s) 614, 645, 646, 661, 674, 921, 1291
PstNI CAGNNNCTG 1 cut(s) 474
PsuI RGATCY 1 cut(s) 503
PsyI GACNNNGTC 1 cut(s) 422
PteI GCGCGC 1 cut(s) 1326
PvuI CGATCG 1 cut(s) 752
PvuII CAGCTG 1 cut(s) 697
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
SacI GAGCTC 1 cut(s) 936
SaqAI TTAA 3 cut(s) 623, 894, 974
Sau3AI GATC 8 cut(s) 298, 503, 749, 777, 954, 1072, 1189, 1209
Sau96I GGNCC 7 cut(s) 614, 645, 646, 661, 674, 921, 1291
ScaI AGTACT 1 cut(s) 233
SchI GAGTC 5 cut(s) 401, 451, 953, 1054, 1125
ScrFI CCNGG 9 cut(s) 351, 460, 559, 628, 665, 1010, 1065, 1164, 1228
SduI GDGCHC 3 cut(s) 350, 649, 936
SfoI GGCGCC 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 806
SgrAI CRCCGGYG 1 cut(s) 565
SinI GGWCC 3 cut(s) 614, 921, 1291
Sse9I AATT 2 cut(s) 719, 896
SspDI GGCGCC 1 cut(s) 209
SspMI CTAG 1 cut(s) 1044
SstI GAGCTC 1 cut(s) 936
StyD4I CCNGG 9 cut(s) 349, 458, 557, 626, 663, 1008, 1063, 1162, 1226
TaaI ACNGT 3 cut(s) 731, 952, 1001
TaiI ACGT 4 cut(s) 801, 974, 1089, 1318
TaqI TCGA 6 cut(s) 138, 806, 927, 957, 1071, 1197
TasI AATT 2 cut(s) 719, 896
TatI WGTACW 1 cut(s) 231
TauI GCSGC 9 cut(s) 180, 183, 757, 760, 948, 1016, 1159, 1162, 1303
TfiI GAWTC 4 cut(s) 708, 1223, 1252, 1269
Tru1I TTAA 3 cut(s) 623, 894, 974
Tru9I TTAA 3 cut(s) 623, 894, 974
TscAI CASTG 1 cut(s) 404
TseI GCWGC 5 cut(s) 294, 315, 694, 829, 1323
TspDTI ATGAA 1 cut(s) 1165
TspGWI ACGGA 6 cut(s) 435, 516, 865, 871, 904, 1039
TspRI CASTG 1 cut(s) 404
Tth111I GACNNNGTC 1 cut(s) 422
VpaK11BI GGWCC 3 cut(s) 614, 921, 1291
XapI RAATTY 1 cut(s) 719
XmiI GTMKAC 1 cut(s) 733
XmnI GAANNNNTTC 2 cut(s) 719, 1172
XspI CTAG 1 cut(s) 1044
ZraI GACGTC 1 cut(s) 799
ZrmI AGTACT 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.