RLG00000006550

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0017166
Physical Location & Seq
Forward (+)
8356517 .. 8357839
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006550

Sequence Viewer

Length: 1323 bp
ATGGTCTCACTCTCCCAACTCCCATTCTTCTTCTTCTTCTTCTTCTTCTTCACAACCCTCTGCAACTCCCAACACTACCTCCAACTCCCGCTTCTCCACACGGGCCCCTTCCCCACACTCTCCCAAGCCCTCTCTCTCGACACCCGCCGCCTCTCTCTCCTCCACAACCGCCGCCGCCGCCGCTCCGTCACCTCCCCCGTCGTCTCCGGCGCCTCCACCGGCTCCGGCCAGTACTTCGTCCGCCTCCGCCTCGGCTCTCCCCCCCAGAGCCTCCTCCTCGTCGCCGACACCGGCAGCGATCTCGTCTGGCTCCGCTGCTCCGCCTGCAAAAACTGCTCCAATCGGAGCCCCGGCTCCGCTTTCCTCGCCCGCCACTCCACCACATTCTCACCCTACCACTGCTACGACTCCGCCTGCGACCTCGTCCCCCGACCCGACCCGAGTCCGTGTAACCATACCCGGCTCCACAGCCCCTGTCGCTACGAGTATTCCTACTCCGACGGATCCAGAACCGCCGGCTTCTTCTCCAGAGAAACAACTACTCTAAACACCAGCTCCGGGACACCGGCGAAGCTCTCTGACTTGGCGTTCGGGTGCGGGTTTGATGTTTCGGGTCCGAGCCTCGGCGGGGCCCACGGCGTCATGGGCCTGGGAAGAGGCCCAATCTCGTTTGCCTCGCAGCTGGGTCGGCGCTTCGGGAACAGAGTCTCCTACTGTCTACTGGACTACACCCTATCGCCGCCGCCAACGAGTTACCTCAGGATCGGAGCCTCCAAATCCGACGTCGTTTCGAAACTGAGCTTCACGCCCCTGCTGCTCAATCCTCTCTCCCCTACATTTTACTACATTGGTATCAAGTCCGTCTCCGTCAACGGCGTTAAATTACCGGTTCGCCCCTCCGTTTGGTCCCTCGACGAGCTCGGTAATGGTGGCACCGTGATCGACTCAGGGACGACGTTAACTTTCTTGCCCGAGCCGGCTTACCGTCTAATCCTGGCGGCGTTTAAACGGAGCTTGAAGAAGCTGGCTAGCCGAGCCGAGCCGACTCCGGGGTTCGATCTCTGTGTCAACGTGTCGGGTTTATCACGGGCGAGACTACCAAGGCTGAGTTTCGGACTCGCGGGTGGCTCGGTTTTCGCGCCGCCGCCGGGGAACTATTTCATAGAGACAATGGATCGGGTCGAGTGCTTGGCGATCCAGCCCGTTGATTCCGGGTCGGGCTTTTCGGTGATAGGGAATCTTATGCAACAAGGATTCTTGTTTGAGTTTGACAAGGACCGCTCGCGGCTCGGTTTTTCACGTCATGGCTGCGCGCTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

441

Amino Acids

47.86

Weight (kDa)

9.52

Isoelectric Point (pI)

56.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 77 - 433 3.2e-11 Eukaryotic aspartyl protease
TAXi_N PF14543 78 - 256 1.3e-45 Xylanase inhibitor N-terminal
TAXi_C PF14541 281 - 433 2.8e-34 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017166)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25700 AT3G25700
fragaria_vesca FvH4_4g28140
malus_domestica MD16G1048900.v1.1
prunus_persica Prupe.1G304800_v2.0.a1
pyrus_communis pycom16g04270
rosa_chinensis RchiOBHm_Chr4g0435911
rosa_laevigata RLG00000006550
rosa_roxburghii Rroxscaffold_5G00377090
rosa_rugosa Rorug04G0290700
rosa_samantha Rh4BG353800 Rh4DG347600
rosa_wichuraiana Rw4G030130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 786
AccB1I GGYRCC 2 cut(s) 209, 932
AccBSI CCGCTC 2 cut(s) 183, 1281
AccI GTMKAC 1 cut(s) 718
AccII CGCG 4 cut(s) 1121, 1139, 1285, 1313
AclWI GGATC 5 cut(s) 498, 511, 770, 1182, 1189
AcoI YGGCCR 1 cut(s) 226
AcuI CTGAAG 1 cut(s) 1301
AcyI GRCGYC 3 cut(s) 210, 639, 783
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 6 cut(s) 558, 623, 628, 903, 1049, 1148
AflIII ACRYGT 1 cut(s) 1071
AgeI ACCGGT 1 cut(s) 886
AgsI TTSAA 1 cut(s) 1018
AjiI CACGTC 1 cut(s) 1301
AjnI CCWGG 2 cut(s) 648, 993
AjuI GAANNNNNNNTTGG 2 cut(s) 75, 107
AloI GAACNNNNNNTCC 2 cut(s) 692, 724
AluBI AGCT 7 cut(s) 555, 574, 682, 801, 919, 1014, 1024
AluI AGCT 7 cut(s) 555, 574, 682, 801, 919, 1014, 1024
Alw21I GWGCWC 1 cut(s) 921
Alw26I GTCTC 6 cut(s) 10, 208, 712, 868, 1087, 1160
AlwI GGATC 5 cut(s) 498, 511, 770, 1182, 1189
AlwNI CAGNNNCTG 1 cut(s) 474
Ama87I CYCGRG 2 cut(s) 439, 971
AoxI GGCC 5 cut(s) 103, 226, 630, 646, 658
ApaI GGGCCC 2 cut(s) 107, 634
ApeKI GCWGC 5 cut(s) 294, 315, 679, 814, 1308
ArsI GACNNNNNNTTYG 4 cut(s) 572, 604, 768, 800
AsiGI ACCGGT 1 cut(s) 886
Asp700I GAANNNNTTC 1 cut(s) 1157
AspLEI GCGC 5 cut(s) 212, 693, 1141, 1313, 1315
AspS9I GGNCC 9 cut(s) 103, 104, 614, 630, 631, 646, 659, 906, 1276
AsuC2I CCSGG 6 cut(s) 351, 460, 559, 1050, 1149, 1213
AsuHPI GGTGA 3 cut(s) 181, 381, 1240
AsuII TTCGAA 1 cut(s) 791
AsuNHI GCTAGC 1 cut(s) 1028
AvaI CYCGRG 2 cut(s) 439, 971
AvaII GGWCC 3 cut(s) 614, 906, 1276
AxyI CCTNAGG 1 cut(s) 758
BaeGI GKGCMC 2 cut(s) 107, 634
BaeI ACNNNNGTAYC 2 cut(s) 835, 868
BamHI GGATCC 1 cut(s) 503
BanI GGYRCC 2 cut(s) 209, 932
BanII GRGCYC 4 cut(s) 107, 350, 634, 921
Bbv12I GWGCWC 1 cut(s) 921
BbvI GCAGC 5 cut(s) 302, 306, 691, 801, 1295
BceAI ACGGC 2 cut(s) 652, 889
BcgI CGANNNNNNTGC 6 cut(s) 283, 317, 668, 702, 922, 956
BciT130I CCWGG 2 cut(s) 650, 995
BcnI CCSGG 6 cut(s) 351, 460, 559, 1050, 1149, 1213
BcoDI GTCTC 6 cut(s) 10, 208, 712, 868, 1087, 1160
BfaI CTAG 1 cut(s) 1029
BfoI RGCGCY 2 cut(s) 213, 694
BmcAI AGTACT 1 cut(s) 233
Bme1390I CCNGG 8 cut(s) 351, 460, 559, 650, 995, 1050, 1149, 1213
Bme18I GGWCC 3 cut(s) 614, 906, 1276
BmeT110I CYCGRG 2 cut(s) 439, 971
BmgBI CACGTC 1 cut(s) 1301
BmgT120I GGNCC 9 cut(s) 103, 104, 614, 630, 631, 646, 659, 906, 1276
BmrFI CCNGG 8 cut(s) 351, 460, 559, 650, 995, 1050, 1149, 1213
BmtI GCTAGC 1 cut(s) 1032
BoxI GACNNNNGTC 1 cut(s) 441
BpmI CTGGAG 1 cut(s) 511
Bpu14I TTCGAA 1 cut(s) 791
BpuMI CCSGG 6 cut(s) 351, 460, 559, 1050, 1149, 1213
BsaHI GRCGYC 3 cut(s) 210, 639, 783
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 8 cut(s) 250, 349, 622, 634, 649, 1049, 1100, 1148
BsaWI WCCGGW 1 cut(s) 886
BsaXI ACNNNNNCTCC 6 cut(s) 63, 93, 539, 569, 692, 722
Bsc4I CCNNNNNNNGG 6 cut(s) 558, 623, 628, 903, 1049, 1148
Bse118I RCCGGY 6 cut(s) 218, 290, 515, 565, 886, 976
Bse1I ACTGG 2 cut(s) 229, 726
Bse21I CCTNAGG 1 cut(s) 758
BseBI CCWGG 2 cut(s) 650, 995
BseDI CCNNGG 8 cut(s) 250, 349, 622, 634, 649, 1049, 1100, 1148
BseLI CCNNNNNNNGG 6 cut(s) 558, 623, 628, 903, 1049, 1148
BseMII CTCAG 4 cut(s) 772, 788, 960, 1097
BseNI ACTGG 2 cut(s) 229, 726
BsePI GCGCGC 1 cut(s) 1311
BseRI GAGGAG 3 cut(s) 149, 263, 266
BseSI GKGCMC 2 cut(s) 107, 634
BseXI GCAGC 5 cut(s) 302, 306, 691, 801, 1295
BseYI CCCAGC 1 cut(s) 682
Bsh1236I CGCG 4 cut(s) 1121, 1139, 1285, 1313
BshFI GGCC 5 cut(s) 105, 228, 632, 648, 660
BshNI GGYRCC 2 cut(s) 209, 932
BshTI ACCGGT 1 cut(s) 886
BsiHKAI GWGCWC 1 cut(s) 921
BsiHKCI CYCGRG 2 cut(s) 439, 971
BslFI GGGAC 4 cut(s) 410, 574, 892, 964
BslI CCNNNNNNNGG 6 cut(s) 558, 623, 628, 903, 1049, 1148
BsmAI GTCTC 6 cut(s) 10, 208, 712, 868, 1087, 1160
BsmBI CGTCTC 2 cut(s) 208, 868
BsmFI GGGAC 4 cut(s) 410, 574, 892, 964
BsnI GGCC 5 cut(s) 105, 228, 632, 648, 660
Bso31I GGTCTC 1 cut(s) 10
BsoBI CYCGRG 2 cut(s) 439, 971
Bsp119I TTCGAA 1 cut(s) 791
Bsp120I GGGCCC 2 cut(s) 103, 630
Bsp1286I GDGCHC 4 cut(s) 107, 350, 634, 921
Bsp143I GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
BspANI GGCC 5 cut(s) 105, 228, 632, 648, 660
BspCNI CTCAG 4 cut(s) 771, 789, 959, 1098
BspFNI CGCG 4 cut(s) 1121, 1139, 1285, 1313
BspOI GCTAGC 1 cut(s) 1032
BspPI GGATC 5 cut(s) 498, 511, 770, 1182, 1189
BspT104I TTCGAA 1 cut(s) 791
BspT107I GGYRCC 2 cut(s) 209, 932
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 2 cut(s) 183, 1281
BsrFI RCCGGY 6 cut(s) 218, 290, 515, 565, 886, 976
BsrI ACTGG 2 cut(s) 229, 726
BssAI RCCGGY 6 cut(s) 218, 290, 515, 565, 886, 976
BssECI CCNNGG 8 cut(s) 250, 349, 622, 634, 649, 1049, 1100, 1148
BssHII GCGCGC 1 cut(s) 1311
BssMI GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
BssNI GRCGYC 3 cut(s) 210, 639, 783
BssT1I CCWWGG 1 cut(s) 1100
Bst2UI CCWGG 2 cut(s) 650, 995
Bst4CI ACNGT 3 cut(s) 716, 937, 986
Bst6I CTCTTC 1 cut(s) 649
BstACI GRCGYC 3 cut(s) 210, 639, 783
BstAPI GCANNNNNTGC 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 9 cut(s) 325, 370, 415, 517, 978, 1026, 1030, 1283, 1313
BstDEI CTNAG 4 cut(s) 758, 797, 946, 1106
BstDSI CCRYGG 1 cut(s) 634
BstFNI CGCG 4 cut(s) 1121, 1139, 1285, 1313
BstH2I RGCGCY 2 cut(s) 213, 694
BstHHI GCGC 5 cut(s) 212, 693, 1141, 1313, 1315
BstKTI GATC 7 cut(s) 301, 506, 765, 942, 1060, 1177, 1197
BstMAI GTCTC 6 cut(s) 10, 208, 712, 868, 1087, 1160
BstMBI GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
BstNI CCWGG 2 cut(s) 650, 995
BstPAI GACNNNNGTC 1 cut(s) 441
BstSCI CCNGG 8 cut(s) 349, 458, 557, 648, 993, 1048, 1147, 1211
BstSLI GKGCMC 2 cut(s) 107, 634
BstUI CGCG 4 cut(s) 1121, 1139, 1285, 1313
BstV1I GCAGC 5 cut(s) 302, 306, 691, 801, 1295
BstX2I RGATCY 1 cut(s) 503
BstYI RGATCY 1 cut(s) 503
Bsu36I CCTNAGG 1 cut(s) 758
BsuRI GGCC 5 cut(s) 105, 228, 632, 648, 660
BtgI CCRYGG 1 cut(s) 634
BtrI CACGTC 1 cut(s) 1301
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 1 cut(s) 397
Cac8I GCNNGC 9 cut(s) 325, 370, 415, 517, 978, 1026, 1030, 1283, 1313
CaiI CAGNNNCTG 1 cut(s) 474
CfoI GCGC 5 cut(s) 212, 693, 1141, 1313, 1315
Cfr10I RCCGGY 6 cut(s) 218, 290, 515, 565, 886, 976
Cfr13I GGNCC 9 cut(s) 103, 104, 614, 630, 631, 646, 659, 906, 1276
CseI GACGC 1 cut(s) 628
Csp6I GTAC 1 cut(s) 232
CspAI ACCGGT 1 cut(s) 886
CviAII CATG 2 cut(s) 643, 1304
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 4 cut(s) 758, 797, 946, 1106
DinI GGCGCC 1 cut(s) 211
DpnI GATC 7 cut(s) 300, 505, 764, 941, 1059, 1176, 1196
DpnII GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
DraI TTTAAA 1 cut(s) 1006
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 1 cut(s) 649
EarI CTCTTC 1 cut(s) 649
EciI GGCGGA 4 cut(s) 230, 236, 310, 400
Ecl136II GAGCTC 1 cut(s) 919
Eco130I CCWWGG 1 cut(s) 1100
Eco24I GRGCYC 4 cut(s) 107, 350, 634, 921
Eco31I GGTCTC 1 cut(s) 10
Eco47I GGWCC 3 cut(s) 614, 906, 1276
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 1301
Eco81I CCTNAGG 1 cut(s) 758
Eco88I CYCGRG 2 cut(s) 439, 971
EcoICRI GAGCTC 1 cut(s) 919
EcoO109I RGGNCCY 2 cut(s) 104, 630
EcoRII CCWGG 2 cut(s) 648, 993
EcoT14I CCWWGG 1 cut(s) 1100
EcoT38I GRGCYC 4 cut(s) 107, 350, 634, 921
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 1100
Esp3I CGTCTC 2 cut(s) 208, 868
FaeI CATG 2 cut(s) 646, 1307
FaiI YATR 5 cut(s) 456, 644, 1163, 1244, 1305
FaqI GGGAC 4 cut(s) 410, 574, 892, 964
FatI CATG 2 cut(s) 642, 1303
FauI CCCGC 6 cut(s) 96, 152, 377, 590, 620, 1114
FblI GTMKAC 1 cut(s) 718
FriOI GRGCYC 4 cut(s) 107, 350, 634, 921
FspBI CTAG 1 cut(s) 1029
GlaI GCGC 5 cut(s) 211, 692, 1140, 1312, 1314
GsaI CCCAGC 1 cut(s) 686
GsuI CTGGAG 1 cut(s) 511
HaeII RGCGCY 2 cut(s) 213, 694
HaeIII GGCC 5 cut(s) 105, 228, 632, 648, 660
HgaI GACGC 1 cut(s) 628
HhaI GCGC 5 cut(s) 212, 693, 1141, 1313, 1315
Hin1I GRCGYC 3 cut(s) 210, 639, 783
Hin1II CATG 2 cut(s) 646, 1307
Hin6I GCGC 5 cut(s) 210, 691, 1139, 1311, 1313
HinP1I GCGC 5 cut(s) 210, 691, 1139, 1311, 1313
HincII GTYRAC 3 cut(s) 871, 960, 1069
HindII GTYRAC 3 cut(s) 871, 960, 1069
HinfI GANTC 9 cut(s) 407, 442, 705, 944, 1045, 1116, 1208, 1237, 1254
HpaI GTTAAC 1 cut(s) 960
HphI GGTGA 3 cut(s) 181, 381, 1240
Hpy166II GTNNAC 4 cut(s) 719, 871, 960, 1069
Hpy188I TCNGA 7 cut(s) 345, 499, 580, 618, 767, 781, 1115
Hpy188III TCNNGA 5 cut(s) 137, 507, 528, 697, 760
Hpy8I GTNNAC 4 cut(s) 719, 871, 960, 1069
Hpy99I CGWCG 7 cut(s) 203, 284, 503, 785, 788, 917, 958
HpyAV CCTTC 1 cut(s) 118
HpyCH4III ACNGT 3 cut(s) 716, 937, 986
HpyCH4IV ACGT 4 cut(s) 783, 956, 1071, 1300
HpyCH4V TGCA 3 cut(s) 63, 327, 1246
HpyF3I CTNAG 4 cut(s) 758, 797, 946, 1106
HpySE526I ACGT 4 cut(s) 783, 956, 1071, 1300
Hsp92I GRCGYC 3 cut(s) 210, 639, 783
Hsp92II CATG 2 cut(s) 646, 1307
HspAI GCGC 5 cut(s) 210, 691, 1139, 1311, 1313
KasI GGCGCC 1 cut(s) 209
KroI GCCGGC 2 cut(s) 515, 976
KroNI GCCGGC 2 cut(s) 517, 978
KspAI GTTAAC 1 cut(s) 960
Kzo9I GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
Lsp1109I GCAGC 5 cut(s) 302, 306, 691, 801, 1295
MaeI CTAG 1 cut(s) 1029
MaeII ACGT 4 cut(s) 783, 956, 1071, 1300
MaeIII GTNAC 3 cut(s) 187, 449, 752
MalI GATC 7 cut(s) 300, 505, 764, 941, 1059, 1176, 1196
MbiI CCGCTC 2 cut(s) 183, 1281
MboI GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
MflI RGATCY 1 cut(s) 503
MhlI GDGCHC 4 cut(s) 107, 350, 634, 921
MluCI AATT 1 cut(s) 881
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 6 cut(s) 401, 451, 714, 938, 1039, 1110
MmeI TCCRAC 3 cut(s) 106, 522, 804
MroNI GCCGGC 2 cut(s) 515, 976
MroXI GAANNNNTTC 1 cut(s) 1157
MseI TTAA 3 cut(s) 879, 959, 1005
MspA1I CMGCKG 2 cut(s) 315, 682
MspR9I CCNGG 8 cut(s) 351, 460, 559, 650, 995, 1050, 1149, 1213
MssI GTTTAAAC 1 cut(s) 1006
MvaI CCWGG 2 cut(s) 650, 995
MvnI CGCG 4 cut(s) 1121, 1139, 1285, 1313
NaeI GCCGGC 2 cut(s) 517, 978
NarI GGCGCC 1 cut(s) 210
NciI CCSGG 6 cut(s) 351, 460, 559, 1050, 1149, 1213
NdeII GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
NgoMIV GCCGGC 2 cut(s) 515, 976
NheI GCTAGC 1 cut(s) 1028
NlaIII CATG 2 cut(s) 646, 1307
NmeAIII GCCGAG 4 cut(s) 231, 603, 1058, 1063
NmuCI GTSAC 1 cut(s) 187
NspV TTCGAA 1 cut(s) 791
PauI GCGCGC 1 cut(s) 1311
PdiI GCCGGC 2 cut(s) 517, 978
PdmI GAANNNNTTC 1 cut(s) 1157
PfeI GAWTC 3 cut(s) 1208, 1237, 1254
PflFI GACNNNGTC 1 cut(s) 422
PfoI TCCNGGA 1 cut(s) 557
PinAI ACCGGT 1 cut(s) 886
PleI GAGTC 6 cut(s) 401, 450, 713, 938, 1039, 1110
PluTI GGCGCC 1 cut(s) 213
PmeI GTTTAAAC 1 cut(s) 1006
PpsI GAGTC 6 cut(s) 401, 450, 713, 938, 1039, 1110
PshAI GACNNNNGTC 1 cut(s) 441
Psp124BI GAGCTC 1 cut(s) 921
Psp6I CCWGG 2 cut(s) 648, 993
PspFI CCCAGC 1 cut(s) 682
PspGI CCWGG 2 cut(s) 648, 993
PspOMI GGGCCC 2 cut(s) 103, 630
PspPI GGNCC 9 cut(s) 103, 104, 614, 630, 631, 646, 659, 906, 1276
PstNI CAGNNNCTG 1 cut(s) 474
PsuI RGATCY 1 cut(s) 503
PsyI GACNNNGTC 1 cut(s) 422
PteI GCGCGC 1 cut(s) 1311
PvuII CAGCTG 1 cut(s) 682
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
SacI GAGCTC 1 cut(s) 921
SaqAI TTAA 3 cut(s) 879, 959, 1005
Sau3AI GATC 7 cut(s) 298, 503, 762, 939, 1057, 1174, 1194
Sau96I GGNCC 9 cut(s) 103, 104, 614, 630, 631, 646, 659, 906, 1276
ScaI AGTACT 1 cut(s) 233
SchI GAGTC 6 cut(s) 401, 451, 714, 938, 1039, 1110
ScrFI CCNGG 8 cut(s) 351, 460, 559, 650, 995, 1050, 1149, 1213
SduI GDGCHC 4 cut(s) 107, 350, 634, 921
SfoI GGCGCC 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 791
SgrAI CRCCGGYG 1 cut(s) 565
SinI GGWCC 3 cut(s) 614, 906, 1276
Sse9I AATT 1 cut(s) 881
SspDI GGCGCC 1 cut(s) 209
SspMI CTAG 1 cut(s) 1029
SstI GAGCTC 1 cut(s) 921
StyD4I CCNGG 8 cut(s) 349, 458, 557, 648, 993, 1048, 1147, 1211
StyI CCWWGG 1 cut(s) 1100
TaaI ACNGT 3 cut(s) 716, 937, 986
TaiI ACGT 4 cut(s) 786, 959, 1074, 1303
TaqI TCGA 6 cut(s) 138, 791, 912, 942, 1056, 1182
TasI AATT 1 cut(s) 881
TatI WGTACW 1 cut(s) 231
TfiI GAWTC 3 cut(s) 1208, 1237, 1254
Tru1I TTAA 3 cut(s) 879, 959, 1005
Tru9I TTAA 3 cut(s) 879, 959, 1005
TscAI CASTG 1 cut(s) 404
TseFI GTSAC 1 cut(s) 187
TseI GCWGC 5 cut(s) 294, 315, 679, 814, 1308
Tsp45I GTSAC 1 cut(s) 187
TspDTI ATGAA 1 cut(s) 1150
TspGWI ACGGA 7 cut(s) 175, 435, 516, 850, 856, 889, 1024
TspRI CASTG 1 cut(s) 404
Tth111I GACNNNGTC 1 cut(s) 422
VpaK11BI GGWCC 3 cut(s) 614, 906, 1276
XmiI GTMKAC 1 cut(s) 718
XmnI GAANNNNTTC 1 cut(s) 1157
XspI CTAG 1 cut(s) 1029
ZraI GACGTC 1 cut(s) 784
ZrmI AGTACT 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.