YLS9-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g12441 |
| rosa_chinensis | RchiOBHm_Chr5g0020351 |
| rosa_multiflora | Rmu_sc0002087.1_g000002 Rmu_sc0007157.1_g000004 |
| rosa_rugosa | Rorug05G0058800 |
| rosa_samantha | Rh5AG149000 Rh5BG148700 Rh5CG160200 Rh5DG147400 |
| rosa_wichuraiana | Rw5G013210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 174 |
| AciI | CCGC | 2 cut(s) | 5, 263 |
| AcoI | YGGCCR | 1 cut(s) | 540 |
| AcsI | RAATTY | 1 cut(s) | 595 |
| AfaI | GTAC | 2 cut(s) | 48, 272 |
| AflIII | ACRYGT | 1 cut(s) | 186 |
| AgsI | TTSAA | 4 cut(s) | 196, 325, 352, 490 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 458, 490 |
| AluBI | AGCT | 2 cut(s) | 403, 453 |
| AluI | AGCT | 2 cut(s) | 403, 453 |
| Alw26I | GTCTC | 1 cut(s) | 461 |
| Aor13HI | TCCGGA | 1 cut(s) | 174 |
| AoxI | GGCC | 2 cut(s) | 434, 540 |
| ApoI | RAATTY | 1 cut(s) | 595 |
| AspS9I | GGNCC | 1 cut(s) | 434 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 160, 380 |
| BalI | TGGCCA | 1 cut(s) | 542 |
| BbsI | GAAGAC | 2 cut(s) | 218, 302 |
| BceAI | ACGGC | 2 cut(s) | 276, 591 |
| BclI | TGATCA | 1 cut(s) | 501 |
| BcoDI | GTCTC | 1 cut(s) | 461 |
| BfaI | CTAG | 1 cut(s) | 613 |
| BmgT120I | GGNCC | 1 cut(s) | 434 |
| BmiI | GGNNCC | 3 cut(s) | 179, 495, 526 |
| BmsI | GCATC | 1 cut(s) | 91 |
| BpiI | GAAGAC | 2 cut(s) | 218, 302 |
| BsaI | GGTCTC | 1 cut(s) | 461 |
| BsaJI | CCNNGG | 1 cut(s) | 537 |
| BsaWI | WCCGGW | 1 cut(s) | 174 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 458, 488 |
| Bse1I | ACTGG | 3 cut(s) | 28, 511, 556 |
| BseAI | TCCGGA | 1 cut(s) | 174 |
| BseDI | CCNNGG | 1 cut(s) | 537 |
| BseGI | GGATG | 1 cut(s) | 349 |
| BseNI | ACTGG | 3 cut(s) | 28, 511, 556 |
| BshFI | GGCC | 2 cut(s) | 436, 542 |
| BsiSI | CCGG | 1 cut(s) | 175 |
| BsmAI | GTCTC | 1 cut(s) | 461 |
| BsnI | GGCC | 2 cut(s) | 436, 542 |
| Bso31I | GGTCTC | 1 cut(s) | 461 |
| Bsp13I | TCCGGA | 1 cut(s) | 174 |
| Bsp143I | GATC | 1 cut(s) | 501 |
| Bsp19I | CCATGG | 1 cut(s) | 537 |
| BspACI | CCGC | 2 cut(s) | 5, 263 |
| BspANI | GGCC | 2 cut(s) | 436, 542 |
| BspEI | TCCGGA | 1 cut(s) | 174 |
| BspLI | GGNNCC | 3 cut(s) | 179, 495, 526 |
| BspTNI | GGTCTC | 1 cut(s) | 461 |
| BsrI | ACTGG | 3 cut(s) | 28, 511, 556 |
| BssECI | CCNNGG | 1 cut(s) | 537 |
| BssMI | GATC | 1 cut(s) | 501 |
| BssT1I | CCWWGG | 1 cut(s) | 537 |
| BstDSI | CCRYGG | 1 cut(s) | 537 |
| BstF5I | GGATG | 1 cut(s) | 349 |
| BstKTI | GATC | 1 cut(s) | 504 |
| BstMAI | GTCTC | 1 cut(s) | 461 |
| BstMBI | GATC | 1 cut(s) | 501 |
| BstNSI | RCATGY | 2 cut(s) | 190, 360 |
| BstV2I | GAAGAC | 2 cut(s) | 218, 302 |
| BsuRI | GGCC | 2 cut(s) | 436, 542 |
| BtgI | CCRYGG | 1 cut(s) | 537 |
| BtsCI | GGATG | 1 cut(s) | 349 |
| BtsIMutI | CAGTG | 3 cut(s) | 43, 504, 549 |
| Cfr13I | GGNCC | 1 cut(s) | 434 |
| Csp6I | GTAC | 2 cut(s) | 47, 271 |
| CviAII | CATG | 4 cut(s) | 92, 187, 357, 538 |
| CviJI | RGCY | 6 cut(s) | 27, 403, 436, 453, 542, 578 |
| CviKI_1 | RGCY | 6 cut(s) | 27, 403, 436, 453, 542, 578 |
| CviQI | GTAC | 2 cut(s) | 47, 271 |
| DpnI | GATC | 1 cut(s) | 503 |
| DpnII | GATC | 1 cut(s) | 501 |
| EaeI | YGGCCR | 1 cut(s) | 540 |
| EciI | GGCGGA | 2 cut(s) | 20, 278 |
| Eco130I | CCWWGG | 1 cut(s) | 537 |
| Eco31I | GGTCTC | 1 cut(s) | 461 |
| EcoT14I | CCWWGG | 1 cut(s) | 537 |
| ErhI | CCWWGG | 1 cut(s) | 537 |
| FaeI | CATG | 4 cut(s) | 95, 190, 360, 541 |
| FaiI | YATR | 7 cut(s) | 93, 188, 204, 358, 481, 516, 539 |
| FatI | CATG | 4 cut(s) | 91, 186, 356, 537 |
| FbaI | TGATCA | 1 cut(s) | 501 |
| FokI | GGATG | 1 cut(s) | 356 |
| FspBI | CTAG | 1 cut(s) | 613 |
| HaeIII | GGCC | 2 cut(s) | 436, 542 |
| HapII | CCGG | 1 cut(s) | 175 |
| Hin1II | CATG | 4 cut(s) | 95, 190, 360, 541 |
| HpaII | CCGG | 1 cut(s) | 175 |
| HphI | GGTGA | 3 cut(s) | 103, 160, 380 |
| Hpy188I | TCNGA | 3 cut(s) | 429, 501, 564 |
| Hpy188III | TCNNGA | 1 cut(s) | 175 |
| HpyAV | CCTTC | 6 cut(s) | 93, 202, 329, 346, 359, 484 |
| HpyCH4IV | ACGT | 1 cut(s) | 390 |
| HpyCH4V | TGCA | 2 cut(s) | 234, 588 |
| HpySE526I | ACGT | 1 cut(s) | 390 |
| Hsp92II | CATG | 4 cut(s) | 95, 190, 360, 541 |
| Kpn2I | TCCGGA | 1 cut(s) | 174 |
| Ksp22I | TGATCA | 1 cut(s) | 501 |
| Kzo9I | GATC | 1 cut(s) | 501 |
| LmnI | GCTCC | 1 cut(s) | 450 |
| LpnPI | CCDG | 5 cut(s) | 9, 188, 257, 492, 537 |
| LweI | GCATC | 1 cut(s) | 91 |
| MaeI | CTAG | 1 cut(s) | 613 |
| MaeII | ACGT | 1 cut(s) | 390 |
| MaeIII | GTNAC | 4 cut(s) | 56, 94, 368, 482 |
| MalI | GATC | 1 cut(s) | 503 |
| MboI | GATC | 1 cut(s) | 501 |
| MboII | GAAGA | 3 cut(s) | 223, 307, 344 |
| MlsI | TGGCCA | 1 cut(s) | 542 |
| MluCI | AATT | 2 cut(s) | 252, 595 |
| MluNI | TGGCCA | 1 cut(s) | 542 |
| MnlI | CCTC | 7 cut(s) | 85, 115, 126, 182, 334, 355, 507 |
| Mox20I | TGGCCA | 1 cut(s) | 542 |
| MroI | TCCGGA | 1 cut(s) | 174 |
| MscI | TGGCCA | 1 cut(s) | 542 |
| MseI | TTAA | 1 cut(s) | 519 |
| Msp20I | TGGCCA | 1 cut(s) | 542 |
| MspI | CCGG | 1 cut(s) | 175 |
| NcoI | CCATGG | 1 cut(s) | 537 |
| NdeII | GATC | 1 cut(s) | 501 |
| NlaIII | CATG | 4 cut(s) | 95, 190, 360, 541 |
| NlaIV | GGNNCC | 3 cut(s) | 179, 495, 526 |
| NmuCI | GTSAC | 1 cut(s) | 368 |
| NspI | RCATGY | 2 cut(s) | 190, 360 |
| PciI | ACATGT | 1 cut(s) | 186 |
| PscI | ACATGT | 1 cut(s) | 186 |
| PspN4I | GGNNCC | 3 cut(s) | 179, 495, 526 |
| PspPI | GGNCC | 1 cut(s) | 434 |
| RsaI | GTAC | 2 cut(s) | 48, 272 |
| RsaNI | GTAC | 2 cut(s) | 47, 271 |
| SaqAI | TTAA | 1 cut(s) | 519 |
| Sau3AI | GATC | 1 cut(s) | 501 |
| Sau96I | GGNCC | 1 cut(s) | 434 |
| SetI | ASST | 7 cut(s) | 85, 203, 370, 393, 405, 455, 495 |
| SfaNI | GCATC | 1 cut(s) | 91 |
| Sse9I | AATT | 2 cut(s) | 252, 595 |
| SsiI | CCGC | 2 cut(s) | 5, 263 |
| SspMI | CTAG | 1 cut(s) | 613 |
| StyI | CCWWGG | 1 cut(s) | 537 |
| TaiI | ACGT | 1 cut(s) | 393 |
| TaqII | GACCGA | 1 cut(s) | 485 |
| TasI | AATT | 2 cut(s) | 252, 595 |
| Tru1I | TTAA | 1 cut(s) | 519 |
| Tru9I | TTAA | 1 cut(s) | 519 |
| TscAI | CASTG | 3 cut(s) | 43, 511, 556 |
| TseFI | GTSAC | 1 cut(s) | 368 |
| Tsp45I | GTSAC | 1 cut(s) | 368 |
| TspDTI | ATGAA | 2 cut(s) | 19, 80 |
| TspRI | CASTG | 3 cut(s) | 43, 511, 556 |
| XapI | RAATTY | 1 cut(s) | 595 |
| XceI | RCATGY | 2 cut(s) | 190, 360 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 251 |
| XspI | CTAG | 1 cut(s) | 613 |